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Aliases for DARS-AS1 Gene

Subcategory (RNA class) for DARS-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DARS-AS1 Gene

  • DARS Antisense RNA 1 2 3 5

External Ids for DARS-AS1 Gene

Summaries for DARS-AS1 Gene

GeneCards Summary for DARS-AS1 Gene

DARS-AS1 (DARS Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DARS-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DARS-AS1 Gene

Genomics for DARS-AS1 Gene

Regulatory Elements for DARS-AS1 Gene

Enhancers for DARS-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H136012 1.1 Ensembl ENCODE dbSUPER 9.1 +28.6 28625 1 SOX5 CTCF HNF1A BCL6 RAD21 NR2F2 DARS-AS1 MCM6 DARS GC02P136042
GH02H136211 1.8 FANTOM5 Ensembl ENCODE dbSUPER 4 +229.3 229305 5 RAD21 BATF RARA ZNF23 ATF7 RUNX3 CREM IKZF2 SMARCA5 USF2 CXCR4 MCM6 DARS-AS1 UBXN4 HNRNPKP2 ENSG00000279024
GH02H136253 1.7 FANTOM5 Ensembl ENCODE dbSUPER 4.1 +269.8 269814 3 HDGF PKNOX1 ATF1 RB1 YBX1 BATF RAD21 ATF7 ETV6 RUNX3 CXCR4 R3HDM1 MCM6 DARS-AS1 ENSG00000279024 UBBP1
GH02H135983 1.4 ENCODE dbSUPER 0.7 -0.2 -211 3 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B DARS CXCR4 MCM6 DARS-AS1 GC02P135903
GH02H135980 1 ENCODE dbSUPER 0.7 -4.3 -4250 0 PKNOX1 BMI1 ATF7 RUNX3 IKZF2 ZNF687 NR2F1 TRIM22 DPF2 BRF2 RAB3GAP1 DARS DARS-AS1 GC02P135903
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DARS-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DARS-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000123542 24 2001 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B

Genomic Location for DARS-AS1 Gene

Chromosome:
2
Start:
135,985,176 bp from pter
End:
136,022,593 bp from pter
Size:
37,418 bases
Orientation:
Plus strand

Genomic View for DARS-AS1 Gene

Genes around DARS-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DARS-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DARS-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DARS-AS1 Gene

Proteins for DARS-AS1 Gene

Post-translational modifications for DARS-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DARS-AS1 Gene

Domains & Families for DARS-AS1 Gene

Gene Families for DARS-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DARS-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DARS-AS1 Gene

Function for DARS-AS1 Gene

Phenotypes From GWAS Catalog for DARS-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DARS-AS1 Gene

Localization for DARS-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DARS-AS1 Gene

Pathways & Interactions for DARS-AS1 Gene

SuperPathways for DARS-AS1 Gene

No Data Available

Interacting Proteins for DARS-AS1 Gene

Gene Ontology (GO) - Biological Process for DARS-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DARS-AS1 Gene

Drugs & Compounds for DARS-AS1 Gene

No Compound Related Data Available

Transcripts for DARS-AS1 Gene

mRNA/cDNA for DARS-AS1 Gene

(30) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DARS-AS1 Gene

No ASD Table

Relevant External Links for DARS-AS1 Gene

GeneLoc Exon Structure for
DARS-AS1
ECgene alternative splicing isoforms for
DARS-AS1

Expression for DARS-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DARS-AS1 Gene

genes like me logo Genes that share expression patterns with DARS-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DARS-AS1 Gene

Orthologs for DARS-AS1 Gene

Evolution for DARS-AS1 Gene

ENSEMBL:
Gene Tree for DARS-AS1 (if available)
TreeFam:
Gene Tree for DARS-AS1 (if available)

No data available for Orthologs for DARS-AS1 Gene

Paralogs for DARS-AS1 Gene

No data available for Paralogs for DARS-AS1 Gene

Variants for DARS-AS1 Gene

Sequence variations from dbSNP and Humsavar for DARS-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000020560 -- 135,985,617(+) CGGCT(C/G)CAGAA intron-variant, utr-variant-5-prime
rs1000188663 -- 135,996,662(+) ATACT(A/C)ATTAA intron-variant
rs1000259278 -- 135,989,705(+) AATCC(A/C)AGCAC intron-variant
rs1000278901 -- 136,005,430(+) GATTT(A/G)TGATC intron-variant
rs1000334881 -- 136,003,507(+) GGTGC(A/G)AGCCA intron-variant

Relevant External Links for DARS-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DARS-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DARS-AS1 Gene

Disorders for DARS-AS1 Gene

Relevant External Links for DARS-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DARS-AS1

No disorders were found for DARS-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DARS-AS1 Gene

Publications for DARS-AS1 Gene

  1. Novel lnc RNA regulated by HIF-1 inhibits apoptotic cell death in the renal tubular epithelial cells under hypoxia. (PMID: 28420760) Mimura I … Nangaku M (Physiological reports 2017) 2 3 60
  2. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 60
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for DARS-AS1 Gene

Sources for DARS-AS1 Gene

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