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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

DAPL1 Gene

protein-coding   GIFtS: 41
GCID: GC02P159651

death associated protein-like 1

  Search for DAPL1
in our new
 Human Malady Compendium 
Biological research products
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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Death Associated Protein-Like 11 2
Early Epithelial Differentiation-Associated Protein2 3
Death-Associated Protein-Like 12
EEDA3

External Ids:    HGNC: 214901   Entrez Gene: 921962   Ensembl: ENSG000001633317   UniProtKB: A0PJW83   

Export aliases for DAPL1 gene to outside databases

Previous GC identifers: GC00U911651 GC02U900711 GC02P159361 GC02P151540


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: DAPL1_HUMAN, A0PJW8
Function: May play a role in the early stages of epithelial differentiation or in apoptosis (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_005403.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the DAPL1 gene promoter:
         GR   p53   GR-beta   POU3F1   MIF-1   Evi-1   COMP1   FOXO1a   GR-alpha   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidDAPL1 promoter sequence
   Search SABiosciences Chromatin IP Primers for DAPL1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DAPL1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q24.1   Ensembl cytogenetic band:  2q24.1   HGNC cytogenetic band: 2q24

DAPL1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
DAPL1 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P159651:  view genomic region     (about GC identifiers)

Start:
159,651,829 bp from pter      End:
159,719,293 bp from pter
Size:
67,465 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: DAPL1_HUMAN, A0PJW8 (See protein sequence)
Recommended Name: Death-associated protein-like 1  
Size: 107 amino acids; 11880 Da
Secondary accessions: A0PJW9 B9EIK6

Explore the universe of human proteins at neXtProt for DAPL1: NX_A0PJW8

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_A0PJW8

  • DAPL1 Protein expression data from MOPED and PaxDb:    About this image 
    DAPL1 Protein Expression
    REFSEQ proteins: NP_001017920.2  
    ENSEMBL proteins: 
     ENSP00000309538   ENSP00000386422   ENSP00000385306  

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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    DAPL1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR024130 DAP1/DAPL1

    Graphical View of Domain Structure for InterPro Entry A0PJW8

    ProtoNet protein and cluster: A0PJW8


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: DAPL1_HUMAN, A0PJW8
    Function: May play a role in the early stages of epithelial differentiation or in apoptosis (By similarity)

    Phenotypes:
         3 GenomeRNAi human phenotypes for DAPL1:

     Increased S DNA content  Increased cell size  S arrest 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for DAPL1 

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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for DAPL1

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006915apoptotic process IEA--
    GO:0030154cell differentiation IEA--

    DAPL1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for DAPL1
    Search CenterWatch for drugs/clinical trials and news about DAPL1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
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    About This Section

    REFSEQ mRNAs for DAPL1 gene: 
    NM_001017920.2  

    Unigene Cluster for DAPL1:

    Death associated protein-like 1
    Hs.59761  [show with all ESTs]
    Unigene Representative Sequence: EL950760
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000309950(uc002uaf.3) ENST00000409042 ENST00000343761

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    Additional cDNA sequence: 

    AF086541.1 AY324399.1 BC127682.1 BC127683.1 BC140719.1 

    1 DOTS entry:

    DT.212081 

    24/37 AceView cDNA sequences (see all 37):

    C00396 AA365801 AA365503 CD675155 AA453863 AW131631 AI632902 AI692575 
    CK299997 AA442475 AF086541 BX117859 AA732993 AA365504 BG818506 AA975337 
    BM129664 BQ185417 AA453779 BQ189090 W96131 BQ186911 BM128924 AA988869 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    DAPL1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCGCATCAAA
    DAPL1 Expression
    About this image

    DAPL1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    PancreasIslets of LangerhansMature Beta CellsPancreas
    AdiposeBody Subcutaneous White AdiposeAdipose
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    PureStem™ progenitor E68 (Embryonic Progenitor Cell)

    See DAPL1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for DAPL1

    SOURCE GeneReport for Unigene cluster: Hs.59761

    UniProtKB/Swiss-Prot: DAPL1_HUMAN, A0PJW8
    Tissue specificity: Expressed in hair follicle (at protein level)

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    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for DAPL1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for DAPL1 gene from 4/11 species (see all 11)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Dapl11 , 5 death associated protein-like 11, 5 82.87(n)1
    81.31(a)1
      2 (33.81 cM)5
    767471  NM_029723.31  NP_083999.11 
     594846535 
    chicken
    (Gallus gallus)
    Aves DAPL16
    Uncharacterized protein
    40(a)
    1 ↔ 1
    7(38079508-38093859)
    African clawed frog
    (Xenopus laevis)
    Amphibia CB559023.12   -- 79.95(n)    CB559023.1 
    zebrafish
    (Danio rerio)
    Actinopterygii dap1b6
    dap1b6
    death associated protein 1b
    39(a)
    39(a)
    many → 1
    many → 1
    9(54130194-54133678)
    9(53975568-53979084)


    ENSEMBL Gene Tree for DAPL1 (if available)
    TreeFam Gene Tree for DAPL1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for DAPL1 gene
    12 SIMAP similar genes for DAPL1 using alignment to 3 protein entries:     DAPL1_HUMAN (see all proteins):
    OR7E5P    OR1D5    LOC441453    OR1F12    OR2J4P    OR7E85P
    FKSG35    OR2A1    OR7A17    OR8I2    OR10C1    DAP

    DAPL1 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for DAPL1
    PGOHUM00000234488


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/442 NCBI SNPs in DAPL1 are shown (see all 442    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1483274701,2
    --159649935(+) AGAAGA/GTTTAA 1 -- us2k10--------
    rs1823291841,2
    --159649965(+) CCACCC/TACAGA 1 -- us2k10--------
    rs1862261991,2
    --159649973(+) AGAATA/GCCACT 1 -- us2k10--------
    rs1906345341,2
    --159650224(+) TTTCTA/GTTCCT 1 -- us2k10--------
    rs1828118981,2
    --159650283(+) GTAGCA/TTTTTT 1 -- us2k10--------
    rs109335051,2
    C,F,A,H--159650308(+) CCATTA/TAACGT 1 -- us2k127Minor allele frequency- T:0.41NS EA NA CSA WA 2768
    rs45616151,2
    C,F,H--159650386(+) CACAAT/CCTGTT 1 -- us2k119Minor allele frequency- C:0.08NS EA NA WA CSA 2033
    rs744987701,2
    F--159650400(+) CCATTC/ATACAG 1 -- us2k11Minor allele frequency- A:0.04WA 118
    rs1855695961,2
    --159650427(+) TTTCTA/CACTTT 1 -- us2k10--------
    rs1415039031,2
    --159650486(+) GTGTAC/TATATG 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for DAPL1 (159651829 - 159719293 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 5 variations for DAPL1
         1 CNV: 53156
         4 Indels: 12102 90094 63221 90095

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    DAPL1 for disorders           About MalaCards

    DAPL1 for disorders           About GeneDecksing

    Human Genome Epidemiology (HuGE) Navigator: DAPL1 (1 document)

    Export disorders for DAPL1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for DAPL1 gene integrated from 9 sources:
    (articles sorted by number of sources associating them with DAPL1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Investigation of genetic susceptibility factors for h uman longevity - A targeted nonsynonymous SNP study. (PubMed id 20800603)1 Flachsbart F....Nebel A. (2010)
    2. EEDA: a protein associated with an early stage of stratified epithelial differentiation. (PubMed id 15920738)2 Sun L.... Lavker R.M. (2006)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
    5. Expressed sequence tag analysis of adult human lens for the NEIBank project: over 2000 non-redundant transcripts, novel genes and splice variants. (PubMed id 12107413)1 Wistow G.... Peterson K. (2002)
    6. Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )2 Aoki H.... Hino O. (2000)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 92196 HGNC: 21490 AceView: OR7E28P Ensembl:ENSG00000163331 euGenes: HUgn92196
    ECgene: DAPL1 H-InvDB: DAPL1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for DAPL1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for DAPL1 gene:
    Search GeneIP for patents involving DAPL1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
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     DAPL1 Proteins, Antibodies, CLIAs, and ELISAs
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    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 13 May 2013

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    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


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