DAPL1 Gene
protein-coding GIFtS : 41
GCID: GC02 P159651
death associated protein-like 1
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Aliasesfor DAPL1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Death Associated Protein-Like 1 1 2 Early Epithelial Differentiation-Associated Protein2 3 Death-Associated Protein-Like 12 EEDA3
Export aliases for DAPL1 gene to outside databases Previous GC identifers: GC00U911651 GC02U900711 GC02P159361 GC02P151540
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Summariesfor DAPL1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: DAPL1_HUMAN, A0PJW8 Function : May play a role in the early stages of epithelial differentiation or in apoptosis (By similarity)
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Genomic Viewsfor DAPL1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_005403.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the DAPL1 gene promoter: GR p53 GR-beta POU3F1 MIF-1 Evi-1 COMP1 FOXO1a GR-alpha FOXO1 Other transcription factors Search SABiosciences Chromatin IP Primers for DAPL1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DAPL1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2q24.1 Ensembl cytogenetic band: 2q24.1 HGNC cytogenetic band: 2q24 DAPL1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P159651: view genomic region
(about GC identifiers )
Start:
159,651,829 bp from pter
End:
159,719,293 bp from pter
Size:
67,465 bases
Orientation:
plus strand
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Proteinsfor DAPL1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: DAPL1_HUMAN, A0PJW8 (See
protein sequence )Recommended Name: Death-associated protein-like 1 Size : 107 amino acids; 11880 Da
Secondary accessions : A0PJW9 B9EIK6Explore the universe of human proteins at neXtProt for DAPL1: NX_A0PJW8 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_A0PJW8 DAPL1 Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_001017920.2 ENSEMBL proteins: ENSP00000309538 ENSP00000386422 ENSP00000385306 Human Recombinant Protein Products for DAPL1: DAPL1 Antibody Products: Assay Products for DAPL1:
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Protein
Domains / Familiesfor DAPL1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
DAPL1 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry A0PJW8 ProtoNet protein and cluster: A0PJW8
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Functionfor DAPL1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: DAPL1_HUMAN, A0PJW8 Function : May play a role in the early stages of epithelial differentiation or in apoptosis (By similarity)Phenotypes: 3 GenomeRNAi human phenotypes for DAPL1 :
Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DAPL1 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DAPL1OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: DAPL1 (NM_001017920 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DAPL1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DAPL1
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Pathways & Interactionsfor DAPL1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for DAPL1 Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006915 apoptotic process
IEA -- GO:0030154 cell differentiation
IEA --
DAPL1 for ontologies About GeneDecksing
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Drugs & Compoundsfor DAPL1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for DAPL1 Search CenterWatch for drugs/clinical trials and news about DAPL1
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Transcriptsfor DAPL1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for DAPL1 gene: NM_001017920.2 Unigene Cluster for DAPL1:
Death associated protein-like 1 Hs.59761 [show with all ESTs ] Unigene Representative Sequence: EL950760 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000309950 (uc002uaf.3 ) ENST00000409042 ENST00000343761 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DAPL1 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DAPL1OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: DAPL1 (NM_001017920 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DAPL1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DAPL1
Additional cDNA sequence: AF086541.1 AY324399.1 BC127682.1 BC127683.1 BC140719.1
1 DOTS entry : DT.212081
24/37 AceView cDNA sequences (see all 37 ):
C00396 AA365801 AA365503 CD675155 AA453863 AW131631 AI632902 AI692575 CK299997 AA442475 AF086541 BX117859 AA732993 AA365504 BG818506 AA975337 BM129664 BQ185417 AA453779 BQ189090 W96131 BQ186911 BM128924 AA988869 GeneLoc Exon Structure
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Expression for DAPL1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section DAPL1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GCGCATCAAAAbout this image DAPL1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See DAPL1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for DAPL1 SOURCE GeneReport for Unigene cluster: Hs.59761 UniProtKB/Swiss-Prot: DAPL1_HUMAN, A0PJW8 Tissue specificity : Expressed in hair follicle (at protein level) SABiosciences Custom PCR Arrays for DAPL1 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for DAPL1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat DAPL1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat DAPL1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat DAPL1
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Orthologsfor DAPL1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for DAPL1 gene from 4/11 species (see all 11 ) About this table
ENSEMBL Gene Tree for DAPL1 (if available)TreeFam Gene Tree for DAPL1 (if available)
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Paralogsfor DAPL1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for DAPL1 gene 12 SIMAP similar genes for DAPL1 using alignment to 3 protein entries: DAPL1_HUMAN (see all proteins ):OR7E5P OR1D5 LOC441453 OR1F12 OR2J4P OR7E85P FKSG35 OR2A1 OR7A17 OR8I2 OR10C1 DAP
DAPL1 for paralogs About GeneDecksing 1 Pseudogenes.org Pseudogene for DAPL1 PGOHUM00000234488
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Genomic Variantsfor DAPL1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for DAPL1 (159651829 - 159719293 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 5 variations for DAPL1 1 CNV : 53156 4 Indels : 12102 90094 63221 90095
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing DAPL1
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Disorders
/ Diseasesfor DAPL1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section DAPL1 for disorders About MalaCards
DAPL1 for disorders About GeneDecksing Human Genome Epidemiology (HuGE) Navigator: DAPL1 (1 document)Export disorders for DAPL1 gene to outside databases
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Publicationsfor DAPL1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for DAPL1 gene integrated from 9 sources : (articles sorted by number of sources associating them with DAPL1) Utopia : connect your pdf to the dynamic world of online information
Investigation of genetic susceptibility factors for h uman longevity - A targeted nonsynonymous SNP study. (PubMed id 20800603) 1 Flachsbart F....Nebel A. (2010) EEDA: a protein associated with an early stage of stratified epithelial differentiation. (PubMed id 15920738) 2 Sun L.... Lavker R.M. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 2 Gerhard D.S....Malek J. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Expressed sequence tag analysis of adult human lens for the NEIBank project: over 2000 non-redundant transcripts, novel genes and splice variants. (PubMed id 12107413) 1 Wistow G.... Peterson K. (2002) Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id ) 2 Aoki H.... Hino O. (2000)
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External Searches for DAPL1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing DAPL1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing DAPL1 gene
(According to HUGE )
About This Section --
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Specialized Databases showing DAPL1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for DAPL1 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for DAPL1 gene: Search GeneIP for patents involving DAPL1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor DAPL1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for DAPL1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for DAPL1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for DAPL1 OriGene Protein Over-expression Lysate for DAPL1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for DAPL1 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DAPL1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DAPL1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for DAPL1 OriGene Custom Protein Services for DAPL1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat DAPL1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing DAPL1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DAPL1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat DAPL1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat DAPL1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat DAPL1
Search Tocris compounds for DAPL1
DAPL1 Proteins, Antibodies, CLIAs, and ELISAs
Search ThermoFisher Antibodies for DAPL1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DAPL1
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