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Aliases for DAPK1-IT1 Gene

Subcategory (RNA class) for DAPK1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DAPK1-IT1 Gene

  • DAPK1 Intronic Transcript 1 2 3 5
  • DAPK1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for DAPK1-IT1 Gene

Previous GeneCards Identifiers for DAPK1-IT1 Gene

  • GC09P090170

Summaries for DAPK1-IT1 Gene

GeneCards Summary for DAPK1-IT1 Gene

DAPK1-IT1 (DAPK1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DAPK1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DAPK1-IT1 Gene

Genomics for DAPK1-IT1 Gene

Regulatory Elements for DAPK1-IT1 Gene

Enhancers for DAPK1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H087554 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.3 2259 3 HDAC1 RFX1 L3MBTL2 SOX6 NR2F1 CEBPB ZEB2 EBF1 CEBPG CTBP1 DAPK1 CTSL DAPK1-IT1 GC09P087601
GH09H087551 1.4 FANTOM5 ENCODE dbSUPER 0.7 -1.5 -1511 1 HDAC1 PKNOX1 ATF1 TBL1XR1 ARNT TCF12 ZNF766 GATA2 ATF7 CREM DAPK1 DAPK1-IT1 RPS29P18
GH09H087568 1.5 Ensembl ENCODE dbSUPER 0.4 +17.1 17093 4 FOXA2 ATF1 MLX ZFP64 ARID4B FEZF1 DMAP1 YY1 FOS SP5 DAPK1 DAPK1-IT1 GC09P087601
GH09H087592 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.8 43792 10 FOXA2 FEZF1 ZNF2 YY1 TCF12 GTF3C2 ATF7 FOS JUNB ZNF592 DAPK1 CTSL GC09P087601 DAPK1-IT1
GH09H087569 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.2 14221 0 ZFP37 DAPK1 DAPK1-IT1 GC09P087601
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DAPK1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DAPK1-IT1 Gene

Chromosome:
9
Start:
87,553,454 bp from pter
End:
87,554,459 bp from pter
Size:
1,006 bases
Orientation:
Plus strand

Genomic View for DAPK1-IT1 Gene

Genes around DAPK1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DAPK1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DAPK1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for DAPK1-IT1 Gene

Proteins for DAPK1-IT1 Gene

Post-translational modifications for DAPK1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DAPK1-IT1 Gene

Domains & Families for DAPK1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DAPK1-IT1 Gene

Function for DAPK1-IT1 Gene

Phenotypes From GWAS Catalog for DAPK1-IT1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for DAPK1-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DAPK1-IT1 Gene

Localization for DAPK1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DAPK1-IT1 Gene

Pathways & Interactions for DAPK1-IT1 Gene

SuperPathways for DAPK1-IT1 Gene

No Data Available

Interacting Proteins for DAPK1-IT1 Gene

Gene Ontology (GO) - Biological Process for DAPK1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DAPK1-IT1 Gene

Drugs & Compounds for DAPK1-IT1 Gene

No Compound Related Data Available

Transcripts for DAPK1-IT1 Gene

mRNA/cDNA for DAPK1-IT1 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DAPK1-IT1 Gene

DAPK1 intronic transcript 1 (non-protein coding):
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for DAPK1-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for DAPK1-IT1 Gene

No ASD Table

Relevant External Links for DAPK1-IT1 Gene

GeneLoc Exon Structure for
DAPK1-IT1
ECgene alternative splicing isoforms for
DAPK1-IT1

Expression for DAPK1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DAPK1-IT1 Gene

SOURCE GeneReport for Unigene cluster for DAPK1-IT1 Gene:

Hs.656160
genes like me logo Genes that share expression patterns with DAPK1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DAPK1-IT1 Gene

Orthologs for DAPK1-IT1 Gene

Evolution for DAPK1-IT1 Gene

ENSEMBL:
Gene Tree for DAPK1-IT1 (if available)
TreeFam:
Gene Tree for DAPK1-IT1 (if available)

No data available for Orthologs for DAPK1-IT1 Gene

Paralogs for DAPK1-IT1 Gene

No data available for Paralogs for DAPK1-IT1 Gene

Variants for DAPK1-IT1 Gene

Relevant External Links for DAPK1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DAPK1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DAPK1-IT1 Gene

Disorders for DAPK1-IT1 Gene

Relevant External Links for DAPK1-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DAPK1-IT1

No disorders were found for DAPK1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DAPK1-IT1 Gene

Publications for DAPK1-IT1 Gene

  1. Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer. (PMID: 22078386) Tahira AC … Reis EM (Molecular cancer 2011) 2 3 60

Products for DAPK1-IT1 Gene

Sources for DAPK1-IT1 Gene

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