DAP Gene
protein-coding GIFtS : 57
GCID: GC05 M010679
death-associated protein
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Aliasesfor DAP gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Death-Associated Protein 1 2 DAP-12 3 Death-Associated Protein 12 DAP13
Export aliases for DAP gene to outside databases Previous GC identifers: GC05M010790 GC05M010732
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Summariesfor DAP gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for DAP : This gene encodes a basic, proline-rich, 15-kD protein. The protein acts as a positive mediator of programmed cell death that is induced by interferon-gamma. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: DAP1_HUMAN, P51397 Function : Negative regulator of autophagy. Involved in mediating interferon-gamma-induced cell deathGene Wiki entry for DAP
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Genomic Viewsfor DAP gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000005.9 NC_018916.1 NT_006576.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the DAP gene promoter: Nkx3-1 Nkx3-1 v4 p53 Nkx3-1 v1 Tal-1beta LCR-F1 Nkx3-1 v2 Nkx3-1 v3 Sox9 ITF-2 Other transcription factors Search SABiosciences Chromatin IP Primers for DAP Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat DAP
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 5p15.2 Ensembl cytogenetic band: 5p15.2 HGNC cytogenetic band: 5p15.2 DAP Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05M010679: view genomic region
(about GC identifiers )
Start:
10,679,342 bp from pter
End:
10,761,387 bp from pter
Size:
82,046 bases
Orientation:
minus strand
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Proteinsfor DAP gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: DAP1_HUMAN, P51397 (See
protein sequence )Recommended Name: Death-associated protein 1 Size : 102 amino acids; 11165 Da
Secondary accessions : Q6FGC3 Q9BUC9Explore the universe of human proteins at neXtProt for DAP: NX_P51397 Post-translational modifications:
Phosphorylated. Phosphorylation by MTOR inhibits the suppressive activity of DAP toward autophagy1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P51397 DAP Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_004385.1 ENSEMBL proteins: ENSP00000230895 ENSP00000394163 Human Recombinant Protein Products: DAP Antibody Products: Assay Products for DAP:
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Protein
Domains / Familiesfor DAP gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
DAP for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry P51397 ProtoNet protein and cluster: P51397
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Functionfor DAP gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: DAP1_HUMAN, P51397 Function : Negative regulator of autophagy. Involved in mediating interferon-gamma-induced cell death
Genatlas biochemistry entry for DAP : positive mediator of apoptosis,15kDa,triggered by interferon gamma,death associated protein 1 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DAP (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DAPOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: DAP (NM_004394 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DAP Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DAP
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DAP
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
DAP for ontologies About GeneDecksing
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Pathways & Interactionsfor DAP gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/6 super-pathways (see all 6 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 PEDF Induced Signaling 2 Rho Family GTPases 3 PAK Pathway 4 Akt Signaling 5 Apoptosis and Autophagy
Pathway sources See GeneCards unified pathways Show all pathways 5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for DAP (see all 15 )1
Cell Signaling Technology (CST) Pathway for DAP 1 BioSystems Pathway for DAP
DAP for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for DAP STRING Interaction
Network Preview (showing 5 interactants - click image to see 10)5/13 Interacting proteins for DAP (P51397 3 ENSP00000230895 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 13 )About this table Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8 ): About this table
DAP for ontologies About GeneDecksing
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Drugs & Compoundsfor DAP gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for DAP Search CenterWatch for drugs/clinical trials and news about DAP / DAP1
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Transcriptsfor DAP gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for DAP gene: NM_004394.2 Unigene Cluster for DAP:
Death-associated protein Hs.75189 [show with all ESTs ] Unigene Representative Sequence: NM_004394 6 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000230895 (uc003jez.4 uc011cmw.2 ) ENST00000432074 ENST00000514882 ENST00000508253 ENST00000510546 ENST00000508646 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DAP (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DAPOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: DAP (NM_004394 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DAP Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DAP
Additional cDNA sequence: AF056450.1 AK298670.1 AK311783.1 BC002726.2 BT006925.1 CR542184.1 X76105.1
18 DOTS entries : DT.100848796 DT.97786156
DT.75121046 DT.99982408 DT.100848786 DT.100848795 DT.100848787 DT.92449320 DT.100848785 DT.95372900 DT.100640726 DT.100848789 DT.92449311 DT.92449318 DT.95372894 DT.99942273 DT.100800411 DT.100848780 24/692 AceView cDNA sequences (see all 692 ):
AI928579 AA223229 AA729859 AA393278 BU542579 BE389087 CK903644 BE465596 BX355779 AI884944 BQ671764 BI090726 AI076261 BQ669882 CR607145 CF131214 BF589455 BQ010174 BG120072 BU623943 BM761744 BU619674 CB163602 CA415699 GeneLoc Exon Structure
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Expression for DAP gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section DAP expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CATCTGTGAG
About this image DAP expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See DAP Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for DAP SOURCE GeneReport for Unigene cluster: Hs.75189 SABiosciences Expression via Pathway-Focused PCR Array including DAP : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for DAPBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat DAP QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat DAP QIAGEN QuantiFast Probe-based Assays in human , mouse , rat DAP In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DAP
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Orthologsfor DAP gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for DAP gene from 6/18 species (see all 18 ) About this table
ENSEMBL Gene Tree for DAP (if available)TreeFam Gene Tree for DAP (if available)
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Paralogsfor DAP gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor DAP gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 5 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for DAP (10679342 - 10761387 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 7 variations for DAP 2 CNVs : 69006 99059 5 Indels : 59221 64119 40734 69007 46745
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing DAP
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Disorders
/ Diseasesfor DAP gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
DAP for disorders About GeneDecksing
OMIM gene information: 600954
OMIM disorders : --4 diseases for DAP : About MalaCards hepatitis b hepatitis cerebritis neuronitis Human Genome Epidemiology (HuGE) Navigator: DAP (30 documents) Export disorders for DAP gene to outside databases
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Publicationsfor DAP gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for DAP gene, integrated from 9 sources (see all 27 ): (articles sorted by number of sources associating them with DAP) Utopia : connect your pdf to the dynamic world of online information
Identification of a novel serine/threonine kinase and a novel 15-kD protein as potential mediators of the gamma interferon-induced cell death. (PubMed id 7828849) 1 , 2 , 3, 9 Deiss L.P....Kimchi A. (1995) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 1 , 2 Olsen J.V....Mann M. (2006) Beyond linker histones and high mobility group proteins: global profiling of perchloric acid soluble proteins. (PubMed id 16602700) 1 , 2 Zougman A. and Wisniewski J.R. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Assignment of DAP1 and DAPK--genes that positively mediate programmed cell death triggered by IFN-gamma--to chromosome regions 5p12.2 and 9q34.1, respectively. (PubMed id 8530096) 1 , 3 Feinstein E....Huebner K. (1995) Death associated proteins (DAPs): from gene identification to the analysis of their apoptotic and tumor suppressive functions. (PubMed id 9916995) 1 , 9 Levy-Strumpf N. and Kimchi A. (1998) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) Meta-analysis identifies 29 additional ulcerative col itis risk loci, increasing the number of confirmed associations to 47. (PubMed id 21297633) 1 Anderson C.A....Rioux J.D. (2011) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) New genetic associations detected in a host response study to hepatitis B vaccine. (PubMed id 20237496) 1 Davila S....Seielstad M. (2010)
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External Searches for DAP gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing DAP gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing DAP gene
(According to HUGE )
About This Section --
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Specialized Databases showing DAP gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for DAP gene: Search GeneIP for patents involving DAP GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor DAP gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for DAP OriGene shRNA RFP for DAP OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for DAP OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for DAP OriGene Protein Over-expression Lysate for DAP Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for DAP OriGene 3'-UTR Clone for DAP OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DAP OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DAP Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for DAP OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for DAP OriGene Custom Protein Services for DAP OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat DAP QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing DAP QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat DAP QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat DAP QIAGEN QuantiFast Probe-based Assays in human , mouse , rat DAP QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat DAP
Antibodies & Assays for DAP  
Search Tocris compounds for DAP
DAP Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DAP
ThermoFisher Antibodies for DAP
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DAP
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