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Aliases for DANT2 Gene

Subcategory (RNA class) for DANT2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DANT2 Gene

  • DXZ4 Associated Non-Coding Transcript 2, Distal 2 3 5

External Ids for DANT2 Gene

Summaries for DANT2 Gene

GeneCards Summary for DANT2 Gene

DANT2 (DXZ4 Associated Non-Coding Transcript 2, Distal) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DANT2 Gene

Genomics for DANT2 Gene

Regulatory Elements for DANT2 Gene

Enhancers for DANT2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG115689 1.3 Ensembl ENCODE dbSUPER 4.1 +278.5 278482 1.7 CTCF CHD7 ZNF2 RAD21 ZNF316 PATZ1 ZNF143 SMC3 PRDM10 FOS DANT1 LOC728825 EEF1GP5 DANT2 GC0XP115682
GH0XG115840 0.7 ENCODE dbSUPER 5 +128.0 128042 1.4 POLR2A CHD1 EZH2 EEF1GP5 DANT1 DANT2
GH0XG115686 0.8 ENCODE dbSUPER 4.3 +281.2 281214 2.9 SREBF1 ZNF121 ZNF316 MAFK LOC728825 DANT1 EEF1GP5 DANT2 GC0XP115682
GH0XG115967 0.8 ENCODE 0.7 +0.6 589 2.6 TBP ZSCAN4 YY1 GLIS2 ZNF366 RCOR1 EGR2 ZHX2 CEBPB ZNF398 DANT2 DANT1
GH0XG115966 0.5 FANTOM5 0.7 +2.1 2073 0.4 ZSCAN4 MLLT1 DANT2 DANT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DANT2 on UCSC Golden Path with GeneCards custom track

Promoters for DANT2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000248215 410 1799 GTF2F1 TBP CTCF ESRRA TAF1 BACH1 CEBPG YY1 E2F1 ZFHX2

Genomic Location for DANT2 Gene

Chromosome:
X
Start:
115,917,271 bp from pter
End:
115,969,111 bp from pter
Size:
51,841 bases
Orientation:
Minus strand

Genomic View for DANT2 Gene

Genes around DANT2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DANT2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DANT2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DANT2 Gene

Proteins for DANT2 Gene

Post-translational modifications for DANT2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DANT2 Gene

Domains & Families for DANT2 Gene

Gene Families for DANT2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DANT2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DANT2 Gene

Function for DANT2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DANT2 Gene

Localization for DANT2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DANT2 Gene

Pathways & Interactions for DANT2 Gene

SuperPathways for DANT2 Gene

No Data Available

Interacting Proteins for DANT2 Gene

Gene Ontology (GO) - Biological Process for DANT2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DANT2 Gene

Drugs & Compounds for DANT2 Gene

No Compound Related Data Available

Transcripts for DANT2 Gene

mRNA/cDNA for DANT2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DANT2 Gene

No ASD Table

Relevant External Links for DANT2 Gene

GeneLoc Exon Structure for
DANT2
ECgene alternative splicing isoforms for
DANT2

Expression for DANT2 Gene

NURSA nuclear receptor signaling pathways regulating expression of DANT2 Gene:

DANT2
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DANT2 Gene

Orthologs for DANT2 Gene

Evolution for DANT2 Gene

ENSEMBL:
Gene Tree for DANT2 (if available)
TreeFam:
Gene Tree for DANT2 (if available)

No data available for Orthologs for DANT2 Gene

Paralogs for DANT2 Gene

No data available for Paralogs for DANT2 Gene

Variants for DANT2 Gene

Sequence variations from dbSNP and Humsavar for DANT2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000006532 -- 115,925,692(+) CAGAA(A/G)AAAAA intron-variant
rs1000096408 -- 115,909,984(+) TATTT(A/T)CCATT intron-variant
rs1000134443 -- 115,919,373(+) AAGGG(C/T)TAGTT intron-variant
rs1000166026 -- 115,970,745(+) TTAGC(C/T)GAGAA upstream-variant-2KB
rs1000246246 -- 115,912,992(+) TTACA(C/T)TAGAT intron-variant

Relevant External Links for DANT2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DANT2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DANT2 Gene

Disorders for DANT2 Gene

Relevant External Links for DANT2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DANT2

No disorders were found for DANT2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DANT2 Gene

Publications for DANT2 Gene

  1. Two novel DXZ4-associated long noncoding RNAs show developmental changes in expression coincident with heterochromatin formation at the human (Homo sapiens) macrosatellite repeat. (PMID: 26188586) Figueroa D.M. … Chadwick B.P. (Chromosome Res. 2015) 2 3 64
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DANT2 Gene

Sources for DANT2 Gene

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