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DAND5 Gene

protein-coding GIFtS: 46

GC19P012945

DAN domain family, member 5
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc , and/or ⁷Ensembl, ⁸miRBase)
About This Section

Aliases
CER2 ^¹, ², ³
CERL2 ^²
CKTSF1B3 ^¹, ², ³
COCO ^²
CRL2 ^²
Cerl-2 ^³
DANTE ^¹, ²
DTE ^¹
FLJ38607 ^¹
GREM3 ^¹, ², ³
Gremlin-3 ^³
MGC126849 ^²
SP1 ^², ³
dante ^²

Descriptions
Cerberus-like protein 2 ^³
Cysteine knot superfamily 1, BMP antagonist 3 ^², ³
DAN domain family, member 5 ^²
cerberus 2 ^²
cerberus-like 2 ^²

External Ids
HGNC: 26780¹
Entrez Gene: 199699²
UniProtKB: Q8N907³
Ensembl: ENSG00000179284⁷

Search outside databases for aliases for DAND5 gene

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for DAND5:

This gene encodes a member of the BMP (bone morphogenic protein) antagonist family. Like BMPs, BMP

antagonists contain cystine knots and typically form homo- and heterodimers. The CAN (cerberus and

dan) subfamily of BMP antagonists, to which this gene belongs, is characterized by a C-terminal

cystine knot with an eight-membered ring. The antagonistic effect of the secreted protein encoded

by this gene is likely due to its direct binding to BMP proteins. As an antagonist of BMP, this

gene may play a role in regulating organogenesis, body patterning, and tissue differentiation. In

mouse, this protein has been shown to bind Nodal and to inhibit the Nodal signaling pathway which

patterns left/right body asymmetry. [provided by RefSeq]

UniProtKB/Swiss-Prot: DAND5_HUMAN, Q8N907

Function: Seems to play a role in the correct specification of the left-right axis. May antagonize

NODAL and BMP4 signaling. Cystine knot-containing proteins play important roles during

development, organogenesis, tissue growth and differentiation (By similarity)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:

UCSC Golden Path with GeneCards custom track

Transcription factor binding sites upstream to the DAND5 gene

Entrez Gene cytogenetic band: 19p13.13 Ensembl cytogenetic band: 19p13.13 HGNC cytogenetic band: 19p13

DAND5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure

GeneLoc location for GC19P012945: (about GC identifiers)

Start:	12,936,973 bp from pter
End:	12,946,567 bp from pter
Size:	9,595 bases
Orientation:	plus strand

RefSeq DNA sequence:

NC_000019.8 NT_011295.10

(According to ¹UniProtKB, and/or Ensembl, Phosphorylation sites according to ²Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: DAND5_HUMAN, Q8N907 (See protein sequence)

Recommended Name: DAN domain family member 5 precursor

Size: 189 amino acids; 20180 Da

Subcellular location: Secreted (Probable)

REFSEQ proteins: NP_689867.1

ENSEMBL proteins:

ENSP00000376873 ENSP00000323155

Human Recombinant Proteins

	Browse Drug Discovery Central at Invitrogen for human recombinant proteins
	Browse Purified and Recombinant Proteins at Millipore
	Browse Human Recombinant Proteins at Sigma-Aldrich
	R&D Systems Recombinant & Natural Proteins for DAND5 (COCO)
	Browse recombinant and purified proteins available from Enzo Life Sciences
	Recombinant Proteins from Abcam (SP1)
	Human Recombinant Proteins from Abnova (DAND5)

OriGene Purified Recombinant Human Protein: DAND5

1 Gene Ontology (GO) cellular component term (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005576	extracellular region	IEA	--

About this table

Antibodies for DAND5:

	Browse Antibodies Central at Invitrogen
	Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
	Browse Antibodies at Sigma-Aldrich
	R&D Systems Antibodies for DAND5 (COCO)
	Antibodies from Abcam (SP1), each with their Abpromise^SM
	Monoclonal and Polyclonal Antibodies from Abnova (DAND5)
	Novus Biologicals Antibody for DAND5

Assays for DAND5:

	Browse Invitrogen for biochemical assays
	Browse Kits and Assays available from Millipore
	Browse R&D Systems for biochemical assays
	Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

Graphical View of Domain Structure for InterPro Entry Q8N907

ProtoNet protein and cluster: Q8N907

UniProtKB/Swiss-Prot: DAND5_HUMAN, Q8N907

Similarity: Belongs to the DAN family

Similarity: Contains 1 CTCK (C-terminal cystine knot-like) domain

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (DAND5)
		Browse for Gene Knock-down Tools from Millipore
		Abnova Chimera RNAi Products for Gene knock-down (DAND5)

OriGene 29mer shRNA kit in GFP-retroviral vector: NM_152654

Applied Biosystems Silencer® siRNAs for DAND5

Sigma-Aldrich siRNA for DAND5

Sigma-Aldrich shRNA for DAND5

Explore Sigma-Aldrich super-pooled esiRNAs

Clones:		Browse Clone Ranger at Invitrogen for clones
		Browse Clones for the Expression of Recombinant Proteins Available from Millipore

OriGene GFP tagged cDNA clone in CMV expression vector: NM_152654
Myc/DDK tagged cDNA clone in CMV expression vector: NM_152654
untagged cDNA clone in CMV expression vector: NM_152654

Primers:

Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers

OriGene genome-wide validated SYBR primer pairs: NM_152654

UniProtKB/Swiss-Prot: DAND5_HUMAN, Q8N907

Function: Seems to play a role in the correct specification of the left-right axis. May antagonize

NODAL and BMP4 signaling. Cystine knot-containing proteins play important roles during

development, organogenesis, tissue growth and differentiation (By similarity)

6 MGI mutant phenotypes (inferred from 1 allele) (MGI details for Dand5):

	embryogenesis	growth/size	lethality-prenatal/perinatal	life span-post-weaning/aging
respiratory system

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to ¹UniProtKB, ²MINT, and/or ³STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

2 Gene Ontology (GO) biological process terms (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0007368	determination of left/right symmetry	IEA	--
GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	IEA	--

About this table

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse drugs & compounds from Enzo Life Sciences

Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for DAND5

(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (DAND5)
		Browse for Gene Knock-down Tools from Millipore
		Abnova Chimera RNAi Products for Gene knock-down (DAND5)

OriGene 29mer shRNA kit in GFP-retroviral vector: NM_152654

Sigma-Aldrich siRNA for DAND5

Sigma-Aldrich shRNA for DAND5

Explore Sigma-Aldrich super-pooled esiRNAs

Applied Biosystems Silencer® siRNAs:

NM_152654

REFSEQ mRNAs for DAND5 gene:

NM_152654.2

Applied Biosystems TaqMan ® Gene Expression Assays:

NM_152654

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_152654
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_152654
                                 untagged cDNA clone in CMV expression vector: NM_152654

Additional cDNA sequence:

AB070695.1 AK095926.1 BC025333.1 BC101800.1 BC113476.1

2 DOTS entries:

DT.100009965 DT.91954794

5 AceView cDNA sequences:

AB070695 NM_152654 AK095926 BC025333 BG330085

highest scoring ESTs for DAND5:

AB070695 AK095926 BC025333 BG330085 NM_152654 BC101800 BC113476 BG395224 CK005817 DA563183

Unigene Cluster for DAND5:

DAN domain family, member 5

Hs.331981 [show with all ESTs]

Unigene Representative Sequence: BC025333

GeneLoc Exon Structure

2 Ensembl transcripts including schematic representations:

ENST00000393168 ENST00000317060

(Experimental results according to ¹GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to ²GeneAnnot , ³GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

DAND5 expression in normal and diseased human tissues

Applied Biosystems TaqMan ® Gene Expression Assays for DAND5

¹ / ²

1 probe-set matching DAND5 gene

	Affymetrix probe-set	Array	# genes	Sensitivity	Specificity	Correlation	Length	Gb_Accession	Consensus	Uniqueness	Score	Rank
	Affymetrix probe-set	Array	GeneAnnot data			GeneNote data		GeneTide data
	1562772_a_at²	U133Plus2	1	1.00	1.00	--	--	--	--	--	--	--

About this table

Data from

(Publications) and GNF BioGPS
About these images
About these images

CGAP SAGE TAG: GCATTCCACA

SOURCE GeneReport for Unigene cluster: Hs.331981

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD and/or ⁵MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section

Orthologs for DAND5 gene from 4 species

Organism	Gene	Locus	Description	Human Similarity	NCBI accessions
dog (Canis familiaris)	DAND5¹	--	DAN domain family, member 5	77.43(n) 66.14(a)	484921 XM_542037.1 XP_542037.1
chimpanzee (Pan troglodytes)	DAND5¹	--	DAN domain family, member 5	99.47(n) 98.94(a)	747680 XM_001170597.1 XP_001170597.1
rat (Rattus norvegicus)	Dand5¹	--	DAN domain family, member 5	72.16(n) 65.38(a)	685719 XM_001064979.1 XP_001064979.1
mouse (Mus musculus)	Dand5^{1, 5}	8⁵	DAN domain family, member 5^{1, 5}	72.16(n)¹ 64.29(a)¹	23863¹ NM_201227.2¹ NP_957679.1¹ AA289245⁵ AB070694⁵ (see all 9)

About this table Species with no ortholog for DAND5

ENSEMBL Gene Tree for DAND5

(Paralogs according to ¹HomoloGene
and ²Ensembl, Pseudogenes according to ³Pseudogene.org)
About This Section

Paralogs for DAND5 gene

CER1²

(According to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section

10/41 NCBI SNPs in DAND5 are shown (see all 41 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay) (see all 7)

AB	SNP ID	Valid	Chr 19 pos	Sequence	Recs	AA Chg	Type	More	Recs	Allele freq	Pop	Total sample	More
AB	Genomic Data				Transcription Data				Allele Frequencies
				--	--	--		--	--				--
	rs10411617^1,2	A,C,F,H	12945626(+)	`TGCCCG/ATCCTG`	1	--	ut3¹ ese³		4		EU EA WA	398
--	rs7250153^1,2	C,F,H	12940984(+)	`agagaT/Cgaggt`	1	--	ng5¹		4		EU EA WA	420
--	rs7250142^1,2	A,F,H	12940954(+)	`gtgccC/Tggcca`	1	--	ng5¹		4		EU EA WA	416
	rs11670895^1,2	C,F,H	12942089(+)	`gcatgG/Actccc`	1	--	int¹		8		EU EA WA	838
--	rs7258505^1,2	A,C	12943943(+)	`TCTCGA/GCTCAC`	1	--	int¹		0	--	--	--	--
--	rs4804745^1,2	A,C	12944903(-)	`gtcagC/Gagatc`	1	--	int¹		0	--	--	--	--
--	rs4804746^1,2	A,C	12944883(-)	`CTGGCC/TAACAC`	1	--	int¹		0	--	--	--	--
--	rs7248481^1,2	A,C	12944967(+)	`CACCGC/TGCCCG`	1	--	int¹		0	--	--	--	--
--	rs10419741^1,2	--	12945777(+)	`gtttaC/Tgccat`	1	--	ut3¹ ese³		0	--	--	--	--
--	rs5827169^1,2	--	12946345(-)	`TTTTT-/TTTCTT`	1	--	ut3¹ trp³		0	--	--	--	--

About this table

HapMap Linkage Disequilibrium images for DAND5 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 609068

(Possibly Related Articles in Doctor's Guide)
About This Section

(in PubMed. Associations of this gene to articles via ¹Novoseek, ²HGNC, ³Entrez Gene, ⁴UniProtKB/Swiss-Prot, ⁵UniProtKB/TrEMBL, ⁶GAD, and/or ⁷PharmGKB)
About This Section

10/11 PubMed articles for DAND5 gene (see all 11 ):

Identification and characterization of human CKTSF1B2 and CKTSF1B3 genes in silico. (PubMed id 15254711)^{1, 2, 3, 4} Katoh M. and Katoh M. (2004)
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)^{3, 4} Ota T....Sugano S. (2004)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)⁴ Gerhard D.S....Malek J. (2004)
Comparative genomic analysis of the eight-membered ring cystine knot-containing bone morphogenetic protein antagonists. (PubMed id 14525956)³ Avsian-Kretchmer O. and Hsueh A.J. (2004)
The activity of the Nodal antagonist Cerl-2 in the mouse node is required for correct L/R body axis. (PubMed id 15466485)³ Marques S....Belo J.A. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)³ Strausberg R.L....Marra M.A. (2002)
Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )⁴ Aoki H.... Hino O. (2000)
CER1 is a common target of WNT and NODAL signaling pathways in human embryonic stem cells. (PubMed id 16596263)¹ Katoh M. and Katoh M. (2006)
Comparative genomics on Norrie disease gene. (PubMed id 15806314)¹ Katoh M. and Katoh M. (2005)
Molecular cloning of cDNA for SPase, a monkey cathepsin L orthologue. (PubMed id 16147867)¹ Nishinaka T....Chiu R. (2005)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 199699	HGNC: 26780	AceView: FLJ38607	Ensembl:ENSG00000179284	euGenes: HUgn199699
ECgene: DAND5	H-InvDB: DAND5

(According to HUGE)
About This Section

(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Licensable Technologies for DAND5
(Available from WIS Yeda, Salk, Tufts)

About This Section

(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section

Products for DAND5:

TaqMan ® Gene Expression Assays

TaqMan ® Genotyping Assays

Free SNP selection tool

Invitrogen iPath Pathways	Invitrogen BLOCK-iT™ RNAi
Invitrogen Antibodies	Invitrogen Assays
Invitrogen Clones	Invitrogen Q-PCR Products
Invitrogen Human Recombinant Kinases	Invitrogen Custom Antibody and Peptide Service
Invitrogen Proteins / Assays / Screening Services	Search Invitrogen catalog for DAND5-related products

	Millipore Custom Antibody & Bulk Services
	Millipore Preclinical / Clinical Development Services
	Millipore Immunoassay Services
	Millipore Target Screening & Profiling Services

	Predesigned and custom siRNAs for DAND5		Browse antibodies at Sigma-Aldrich
	Explore super-pooled esiRNAs		Browse proteins at Sigma-Aldrich
	Lentivirus-delivered shRNAs for DAND5		Browse small molecules at Sigma-Aldrich
	"Your Favorite Gene" Pathways		feedback

	Antibodies		Primer Pairs
	Cell Culture Products		ELISAs
	Flow Cytometry Kits		Protease Activity Assays & Reagents
	Cell Selection/Detection Kits & Reagents		ELISA/Assay Development Kits & Reagents
	Multiplex/Array Assay Kits & Reagents		ELISpot Kits & Development Modules
	Recombinant & Natural Proteins

	Recombinant Proteins (DAND5)
	Antibodies (DAND5)
	Chimera RNAi (DAND5)
	Custom Service for Mouse Mab
	Custom Service for Rabbit Pab from Full-length Protein

Search for Antibodies & Assays

	Recombinant Proteins (SP1)
	Antibodies (SP1)

	Tagged/untagged cDNA clones
	Validated SYBR primer pairs
	Purified proteins from HEK293T cells
	Western blot validated antibodies
	shRNA in GFP-retroviral vector

Search Tocris compounds for DAND5

Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies

Antibodies for DAND5

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DAND5 Gene

protein-coding GIFtS: 46

Aliases &
Descriptions
for DAND5

Summaries
for DAND5

Genomic Location
for DAND5

Proteins
for DAND5

Protein Domains/
Families
for DAND5

Gene Function
for DAND5

Pathways & Interactions
for DAND5

Drugs & Compounds
for DAND5

Transcripts
for DAND5

Expression
for DAND5

Orthologs
for DAND5

Paralogs
for DAND5

SNPs/Variants
for DAND5

Disorders & Mutations
for DAND5

Medical News
for DAND5

Publications
for DAND5

Search for DAND5

Genome Databases showing DAND5

Other Databases showing DAND5

Specialized Databases showing DAND5

Licensable Technologies
for DAND5

Services
for DAND5

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

DAND5 (Gene Symbol)
CER2
CERL2
CKTSF1B3
COCO
CRL2
Cerl-2
DANTE
DTE
FLJ38607
GREM3
Gremlin-3
MGC126849
SP1
dante
Cerberus-like protein 2
Cysteine knot superfamily 1, BMP antagonist 3
DAN domain family, member 5
cerberus 2
cerberus-like 2

DAND5 Gene

protein-coding GIFtS: 46

Aliases & Descriptionsfor DAND5

Summariesfor DAND5

Genomic Locationfor DAND5

Proteinsfor DAND5

Protein Domains/Familiesfor DAND5

Gene Functionfor DAND5

Pathways & Interactionsfor DAND5

Drugs & Compoundsfor DAND5

Transcriptsfor DAND5

Expression for DAND5

Orthologsfor DAND5

Paralogsfor DAND5

SNPs/Variantsfor DAND5

Disorders & Mutationsfor DAND5

Medical Newsfor DAND5

Publicationsfor DAND5

Search for DAND5

Genome Databases showing DAND5

Other Databases showing DAND5

Specialized Databases showing DAND5

Licensable Technologiesfor DAND5

Servicesfor DAND5

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Aliases &
Descriptions
for DAND5

Summaries
for DAND5

Genomic Location
for DAND5

Proteins
for DAND5

Protein Domains/
Families
for DAND5

Gene Function
for DAND5

Pathways & Interactions
for DAND5

Drugs & Compounds
for DAND5

Transcripts
for DAND5

Expression
for DAND5

Orthologs
for DAND5

Paralogs
for DAND5

SNPs/Variants
for DAND5

Disorders & Mutations
for DAND5

Medical News
for DAND5

Publications
for DAND5

Licensable Technologies
for DAND5

Services
for DAND5