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Aliases for DANCR Gene

Subcategory (RNA class) for DANCR Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DANCR Gene

  • Differentiation Antagonizing Non-Protein Coding RNA 2 3 4
  • KIAA0114 2 3 4
  • Small Nucleolar RNA Host Gene 13 (Non-Protein Coding) 2 3
  • Adipogenesis Up-Regulated Transcript 2 2 3
  • Anti-Differentiation Noncoding RNA 2 3
  • Anti-Differentiation NcRNA 2 3
  • SNHG13 3 4
  • ANCR 3 4
  • Small Nucleolar RNA Host Gene Protein 13 4
  • Anti-Differentiation NcRNA Protein 4
  • LncRNA-ANCR 3
  • AGU2 3

External Ids for DANCR Gene

Previous HGNC Symbols for DANCR Gene

  • KIAA0114
  • SNHG13

Previous GeneCards Identifiers for DANCR Gene

  • GC04P053582
  • GC04P053584
  • GC04P053588

Summaries for DANCR Gene

GeneCards Summary for DANCR Gene

DANCR (Differentiation Antagonizing Non-Protein Coding RNA) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DANCR Gene

Genomics for DANCR Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for DANCR Gene

Chromosome:
4
Start:
52,712,404 bp from pter
End:
52,720,351 bp from pter
Size:
7,948 bases
Orientation:
Plus strand

Genomic View for DANCR Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DANCR Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DANCR Gene

No data available for Regulatory Elements for DANCR Gene

Proteins for DANCR Gene

  • Protein details for DANCR Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C864-DANCR_HUMAN
    Recommended name:
    Putative uncharacterized protein DANCR
    Protein Accession:
    P0C864
    Secondary Accessions:
    • A0A024RD90

    Protein attributes for DANCR Gene

    Size:
    163 amino acids
    Molecular mass:
    16785 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DANCR Gene

Proteomics data for DANCR Gene at MOPED

Post-translational modifications for DANCR Gene

No Post-translational modifications

No data available for DME Specific Peptides for DANCR Gene

Domains & Families for DANCR Gene

Gene Families for DANCR Gene

Protein Domains for DANCR Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DANCR: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DANCR Gene

Function for DANCR Gene

Phenotypes for DANCR Gene

GenomeRNAi human phenotypes for DANCR:
genes like me logo Genes that share phenotypes with DANCR: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DANCR Gene

Localization for DANCR Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DANCR Gene

Pathways & Interactions for DANCR Gene

SuperPathways for DANCR Gene

No Data Available

Interacting Proteins for DANCR Gene

Gene Ontology (GO) - Biological Process for DANCR Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DANCR Gene

Drugs & Compounds for DANCR Gene

No Compound Related Data Available

Transcripts for DANCR Gene

mRNA/cDNA for DANCR Gene

(4) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DANCR Gene

Differentiation antagonizing non-protein coding RNA:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DANCR Gene

No ASD Table

Relevant External Links for DANCR Gene

GeneLoc Exon Structure for
DANCR
ECgene alternative splicing isoforms for
DANCR

Expression for DANCR Gene

mRNA expression in normal human tissues for DANCR Gene

SOURCE GeneReport for Unigene cluster for DANCR Gene Hs.744077

mRNA Expression by UniProt/SwissProt for DANCR Gene

P0C864-DANCR_HUMAN
Tissue specificity: Expressed in keratinocytes.
genes like me logo Genes that share expression patterns with DANCR: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for DANCR Gene

Orthologs for DANCR Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for DANCR Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Dancr 16
Species with no ortholog for DANCR:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DANCR Gene

ENSEMBL:
Gene Tree for DANCR (if available)
TreeFam:
Gene Tree for DANCR (if available)

Paralogs for DANCR Gene

No data available for Paralogs for DANCR Gene

Variants for DANCR Gene

Relevant External Links for DANCR Gene

HapMap Linkage Disequilibrium report
DANCR

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DANCR Gene

Disorders for DANCR Gene

Relevant External Links for DANCR

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DANCR
genes like me logo Genes that share disorders with DANCR: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DANCR Gene

Publications for DANCR Gene

  1. Suppression of progenitor differentiation requires the long noncoding RNA ANCR. (PMID: 22302877) Kretz M. … Khavari P.A. (Genes Dev. 2012) 2 67
  2. Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation. (PMID: 19531736) Kikuchi K. … Aizawa Y. (Nucleic Acids Res. 2009) 2 67
  3. Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIAA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1. (PMID: 7788527) Nagase T. … Nomura N. (DNA Res. 1995) 2 67
  4. A LncRNA-MAF:MAFB Transcription Factor Network Regulates Epidermal Differentiation. (PMID: 25805135) Lopez-Pajares V. … Khavari P.A. (Dev. Cell 2015) 67
  5. Long noncoding RNA DANCR increases stemness features of hepatocellular carcinoma by derepression of CTNNB1. (PMID: 25964079) Yuan S.X. … Zhou W.P. (Hepatology 2015) 67

Products for DANCR Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate DANCR
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DANCR
    • Block miRNA regulation of DANCR using miScript Target Protectors

    Sources for DANCR Gene

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