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Aliases & Descriptions for DAG1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| 156DAG 1, 2 | | A3a 1, 2 | | AGRNR 1, 2 | | DAG 1, 2, 5 | | alpha-dystroglycan 2 | | beta-dystroglycan 2 |
| | | Descriptions |
|---|
| Dystrophin-associated glycoprotein 1 3 | | dystroglycan 1 2 | | dystroglycan 1 (dystrophin-associated glycoprotein 1) 2 | | dystrophin-associated glycoprotein-1 2 |
|
| | Search outside databases for aliases for DAG1 genePrevious GC identifers: GC03M048929 GC03M048831 GC03P049362 GC03P049466 |
Summaries for DAG1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for DAG1: Dystroglycan is a laminin binding component of the dystrophin-glycoprotein complex which provides a linkage between the subsarcolemmal cytoskeleton and the extracellular matrix. Dystroglycan 1 is a candidate gene for the site of the mutation in autosomal recessive muscular dystrophies. The dramatic reduction of dystroglycan 1 in Duchenne muscular dystrophy leads to a loss of linkage between the sarcolemma and extracellular matrix, rendering muscle fibers more susceptible to necrosis. Dystroglycan also functions as dual receptor for agrin and laminin-2 in the Schwann cell membrane. The muscle and nonmuscle isoforms of dystroglycan differ by carbohydrate moieties but not protein sequence. [provided by RefSeq] UniProtKB/Swiss-Prot: DAG1_HUMAN, Q14118Function: Forms part of the dystrophin-associated protein complex (DAPC) which may link the cytoskeleton to the extracellular matrix. Alpha-dystroglycan functions as a laminin receptor. Binds to several types of arenaviruses. Is a target for the entry of Mycobacterium leprae into peripheral nerve Schwann cellsGene Wiki entry for DAG1 (Dystroglycan) |
Genomic Location for DAG1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the DAG1 gene 
Entrez Gene cytogenetic band: 3p21 Ensembl cytogenetic band: 3p21.31 HGNC cytogenetic band: 3p21DAG1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03P049482:
(about GC identifiers)
Start:
|
49,482,569 bp from pter |
End:
|
49,548,052 bp from pter |
Size:
|
65,484 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000003.10 NT_022517.17
| Proteins for DAG1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: DAG1_HUMAN, Q14118 (See
protein sequence)Recommended Name: Dystroglycan precursor Size: 895 amino acids; 97441 Da
Subunit: Interacts with SGCD (By similarity). Interacts with AGR2 and AGR3
Subcellular location: Alpha-dystroglycan: Secreted, extracellular space
Subcellular location: Beta-dystroglycan: Cell membrane; Single-pass type I membrane protein. Cytoplasm, cytoskeleton
PDB structures from and Proteopedia :1EG4 (3D)
 
Secondary accessions: A8K6M7 Q969J9Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004384.2
ENSEMBL proteins: ENSP00000312435
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5/9 Gene Ontology (GO) cellular component terms (links to tree view) (see all 9
): About this table
Antibodies for DAG1: Assays for DAG1: | Protein
Domains/ Families for DAG1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q14118
ProtoNet protein and cluster: Q14118 2 Blocks protein families: IPB006644 Dystroglycan-type cadherin-like domain IPB008465 Dystroglycan
UniProtKB/Swiss-Prot: DAG1_HUMAN, Q14118Similarity: Contains 1 peptidase S72 domain | Gene Function for DAG1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004393
Applied Biosystems Silencer® siRNAs for DAG1
Sigma-Aldrich siRNA and siRNA Panels for DAG1  Sigma-Aldrich shRNA Panels and shRNA for DAG1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004393                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004393                                  untagged cDNA clone in CMV expression vector: NM_004393 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004393
UniProtKB/Swiss-Prot: DAG1_HUMAN, Q14118Function: Forms part of the dystrophin-associated protein complex (DAPC) which may link the cytoskeleton to the extracellular matrix. Alpha-dystroglycan functions as a laminin receptor. Binds to several types of arenaviruses. Is a target for the entry of Mycobacterium leprae into peripheral nerve Schwann cellsGenatlas biochemistry entry for DAG1:dystrophin associated glycoprotein 1 (97kDa).expressed in muscle,epithelial cells and cells of the nervous system,precursor of the 43kDa DYS associated transmembrane glycoprotein DAG beta (dystroglycan beta),binding to dystrophin or utrophin or one of their truncated forms by its cytoplasmic tail,and a 156kDa extracellular component DAG alpha (dystroglycan alpha) membrane associated through a non covalent interaction with the extracellular domain of DAG beta,also bound to laminin 2 (alpha 2,beta 1,gamma 1) and to agrin and perlecan,multifunctional protein critical in the formation of extracellular matrix in cells contacting basement membranes,connecting the intracellular cytoskeleton to ECM and protecting muscle from mechanical injury,receptor for lymphocytic choriomeningitis virus and Lassa fever virus,also acting as a Schwann cell receptor for mycobacterium leprae,in the presence of the G domain of LAMA27 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Dag1):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for DAG1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 1 Sigma-Aldrich "Your Favorite Gene" Pathway for DAG1 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for DAG1 
5/57 Interacting proteins for DAG1 (Q141181, 2 ENSP000003124353) via UniProtKB, MINT, and/or STRING (see all 57
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for DAG1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for DAG1 1 Novoseek chemical compound relationship for DAG1 gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| calcium |
0.00 |
2 |
9791728 (1), 12963372 (1) |
About this table
|
Transcripts for DAG1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004393
Sigma-Aldrich siRNA and siRNA Panels for DAG1  Sigma-Aldrich shRNA Panels and shRNA for DAG1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004393 REFSEQ mRNAs for DAG1 gene: NM_004393.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004393               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004393                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004393                                  untagged cDNA clone in CMV expression vector: NM_004393  Additional cDNA sequence: AK291692.1 AK297802.1 BC012740.2 BC014616.2 CR591955.1 CR592448.1 L19711.1 17 DOTS entries: DT.219807 DT.100659498 DT.95178088 DT.120904326 DT.95075533 DT.120904122 DT.91922083 DT.100780499 DT.120904198 DT.75160208 DT.102840619 DT.120904533 DT.40116217 DT.91765516 DT.95086220 DT.100742856 DT.95193034 24/499 AceView cDNA sequences (see all 499
):BQ230594 BM718321 BC012740 BF435689 CD514832 BF914772 F37039 AA339603 BF035364 AI932573 BM709238 BX384229 AI570680 CR591955 AA340773 BQ955254 BX280536 BG983242 CF527970 F31074 AU119166 AI031721 BM479667 AA315848
highest scoring ESTs for DAG1:L19711 AA312841 AA323412 AA339603 AA345421 AA349783 AA350768 AA371984 AA507004 AA603599 Unigene Cluster for DAG1: Dystroglycan 1 (dystrophin-associated glycoprotein 1) Hs.76111 [show with all ESTs]Unigene Representative Sequence: NM_004393
GeneLoc Exon Structure
5/11 Alternative Splicing Database (ASD) splice patterns (SP) for DAG1 (see all 11
)
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | · | 2c | · | 2d | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8a | · | 8b | ^ | 9a | · | 9b | · | 9c | · | 9d | · | 9e | · | 9f | · | 9g | ^ | 10a | · | 10b | · | 10c | |
| SP1: | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for DAG1
1 Ensembl transcript including schematic representation: ENST00000308775
|
Expression for DAG1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| DAG1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for DAG1
1 / 2 / 3 5 probe-sets matching DAG1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.76111
Expression variation in blood from EXPOLDB for DAG1 UniProtKB/Swiss-Prot: DAG1_HUMAN, Q14118Tissue specificity: Expressed in a variety of fetal and adult tissues |
Orthologs for DAG1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for DAG1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for DAG1
ENSEMBL Gene Tree for DAG1 | Paralogs for DAG1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for DAG1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for DAG1 (up to first 250kb)
|
Disorders & Mutations for DAG1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 128239
10/12 Novoseek disease relationships for DAG1 gene (see all 12
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| walker-warburg syndrome |
87.16 |
2 |
17559086 (1), 16575835 (1) |
| muscular dystrophies |
86.95 |
18 |
16531417 (3), 15833426 (2), 15342399 (1), 15351499 (1) (see all 13) |
| muscle-eye-brain disease |
82.94 |
1 |
17559086 (1) |
| lassa fever |
80.92 |
4 |
15246261 (1), 17761532 (1), 16254363 (1), 16254364 (1) |
| lymphocytic choriomeningitis |
71.24 |
6 |
15246261 (1), 17761532 (1), 16254363 (1), 16254364 (1) (see all 6) |
| muscular dystrophy duchenne |
63.58 |
2 |
8113213 (1), 1461282 (1) |
| myopathy |
27.45 |
1 |
16289897 (1) |
| breast carcinoma |
25.35 |
2 |
12598319 (1) |
| cancer |
7.56 |
11 |
18808525 (4), 15341990 (1) |
| necrosis |
0.00 |
1 |
9436418 (1) |
About this table
Human Gene Mutation Database: DAG1 Human Genome Epidemiology Navigator: DAG1 (2 documents)
|
Medical News for DAG1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for DAG1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/130 PubMed articles for DAG1 gene (see all 130
):- Human dystroglycan: skeletal muscle cDNA, genomic structure, origin of tissue specific isoforms and chromosomal localization. (PubMed id 8268918)1, 3, 4 Ibraghimov-Beskrovnaya O.... Campbell K.P. (1993)
- hAG-2 and hAG-3, human homologues of genes involved in differentiation, are associated with oestrogen receptor-positive breast tumours and interact with metastasis gene C4.4a and dystroglycan. (PubMed id 12592373)3, 4 Fletcher G.C....Terrett J.A. (2003)
- Structure of a WW domain containing fragment of dystrophin in complex with beta-dystroglycan. (PubMed id 10932245)3, 4 Huang X.... Eck M.J. (2000)
- Genetic mapping of the mouse neuromuscular mutation kyphoscoliosis. (PubMed id 7774920)2, 3 Skynner M.J....Blanco G. (1995)
- Primary structure of dystrophin-associated glycoproteins linking dystrophin to the extracellular matrix. (PubMed id 1741056)2, 3 Ibraghimov-Beskrovnaya O....Campbell K.P. (1992)
- Altered glycosylation of alpha-dystroglycan in neurons of Fukuyama congenital muscular dystrophy brains. (PubMed id 16466646)1, 3 Saito Y....Osawa M. (2006)
- O Mannosylation of alpha-dystroglycan is essential for lymphocytic choriomeningitis virus receptor function. (PubMed id 16254364)1, 3 Imperiali M....Oxenius A. (2005)
- Dystroglycan expression is frequently reduced in human breast and colon cancers and is associated with tumor progression. (PubMed id 12598319)1, 3 Sgambato A....Cittadini A. (2003)
- Nuclear translocation of beta-dystroglycan reveals a distinctive trafficking pattern of autoproteolyzed mucins. (PubMed id 18764929)1, 3 Oppizzi M.L....Muschler J.L. (2008)
- Altered expression of alpha-dystroglycan subunit in human gliomas. (PubMed id 16575202)1, 3 Calogero A....Petrucci T.C. (2006)
|
Search for DAG1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing DAG1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing DAG1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing DAG1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for DAG1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for DAG1:

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