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Aliases for DACT3-AS1 Gene

Subcategory (RNA class) for DACT3-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for DACT3-AS1 Gene

  • DACT3 Antisense RNA 1 2 3
  • DACT3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DACT3-AS1 Gene

ORGUL Members for DACT3-AS1 Gene

Summaries for DACT3-AS1 Gene

GeneCards Summary for DACT3-AS1 Gene

DACT3-AS1 (DACT3 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DACT3-AS1 Gene

Genomics for DACT3-AS1 Gene

Genomic Location for DACT3-AS1 Gene

Start:
46,660,364 bp from pter
End:
46,677,456 bp from pter
Size:
17,093 bases
Orientation:
Plus strand

Genomic View for DACT3-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DACT3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DACT3-AS1 Gene

No data available for Regulatory Elements for DACT3-AS1 Gene

Proteins for DACT3-AS1 Gene

Post-translational modifications for DACT3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DACT3-AS1 Gene

Domains for DACT3-AS1 Gene

Gene Families for DACT3-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with DACT3-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for DACT3-AS1 Gene

Function for DACT3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DACT3-AS1 Gene

Localization for DACT3-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for DACT3-AS1 Gene

Pathways for DACT3-AS1 Gene

SuperPathways for DACT3-AS1 Gene

No Data Available

Interacting Proteins for DACT3-AS1 Gene

Gene Ontology (GO) - Biological Process for DACT3-AS1 Gene

None

No data available for Pathways by source for DACT3-AS1 Gene

Transcripts for DACT3-AS1 Gene

mRNA/cDNA for DACT3-AS1 Gene

(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DACT3-AS1 Gene

DACT3 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DACT3-AS1 Gene

No ASD Table

Relevant External Links for DACT3-AS1 Gene

GeneLoc Exon Structure for
DACT3-AS1
ECgene alternative splicing isoforms for
DACT3-AS1

Expression for DACT3-AS1 Gene

mRNA expression in normal human tissues for DACT3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DACT3-AS1 Gene

This gene is overexpressed in Testis (14.9).

SOURCE GeneReport for Unigene cluster for DACT3-AS1 Gene Hs.434327

genes like me logo Genes that share expressions with DACT3-AS1: view

Orthologs for DACT3-AS1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for DACT3-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia 9330104G04Rik 16
Species with no ortholog for DACT3-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DACT3-AS1 Gene

ENSEMBL:
Gene Tree for DACT3-AS1 (if available)
TreeFam:
Gene Tree for DACT3-AS1 (if available)

Paralogs for DACT3-AS1 Gene

No data available for Paralogs for DACT3-AS1 Gene

Variants for DACT3-AS1 Gene

Sequence variations from dbSNP and Humsavar for DACT3-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs178346 -- 46,667,787(-) ccttg(C/T)gcctt intron-variant
rs188778 -- 46,669,612(-) gactc(C/T)gtctc intron-variant
rs314658 -- 46,670,948(-) AAATA(C/T)CTCAG intron-variant
rs314659 -- 46,670,370(-) CTAAC(C/T)TTCCC intron-variant
rs314660 -- 46,669,588(-) ACAAA(A/G)TCCCA intron-variant

Relevant External Links for DACT3-AS1 Gene

HapMap Linkage Disequilibrium report
DACT3-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for DACT3-AS1 Gene

Disorders for DACT3-AS1 Gene

No disorders were found for DACT3-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for DACT3-AS1 Gene

Publications for DACT3-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for DACT3-AS1 Gene

Sources for DACT3-AS1 Gene

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