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Aliases for DACT3-AS1 Gene

Subcategory (RNA class) for DACT3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DACT3-AS1 Gene

  • DACT3 Antisense RNA 1 2 3 5
  • DACT3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DACT3-AS1 Gene

Previous GeneCards Identifiers for DACT3-AS1 Gene

  • GC19P047163

Summaries for DACT3-AS1 Gene

GeneCards Summary for DACT3-AS1 Gene

DACT3-AS1 (DACT3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DACT3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DACT3-AS1 Gene

Genomics for DACT3-AS1 Gene

Regulatory Elements for DACT3-AS1 Gene

Enhancers for DACT3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H046658 1.3 ENCODE dbSUPER 0.7 +0.3 301 4.2 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A YY1 SLC30A9 ZNF143 FOS ZC3H4 BICRA CCDC61 CCDC9 GNG8 ENSG00000268746 PRKD2 ENSG00000268810 SNRPD2 INAFM1
GH19H046638 1.4 ENCODE dbSUPER 0.3 -21.0 -21016 2.4 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 ZNF2 ZNF143 ZNF207 ZNF548 ZC3H4 BICRA CCDC61 ENSG00000268810 IRF2BP1 CCDC9 SNRPD2 ENSG00000269148 FBXO46 SYMPK
GH19H046654 1 Ensembl ENCODE dbSUPER 0.4 -5.4 -5446 0.7 HDGF PKNOX1 ELF1 ATF7 RFX5 PRKD2 FKRP STRN4 DACT3-AS1 ENSG00000279161
GH19H046652 0.2 dbSUPER 0.4 -7.4 -7400 1.3 PRKD2 STRN4 FKRP DACT3-AS1 ENSG00000279161
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DACT3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DACT3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000110406 836 1201 HDGF PKNOX1 FOXA2 ATF1 ARID4B YY1 SLC30A9 GLIS2 ZNF143 FOS

Genomic Locations for DACT3-AS1 Gene

Genomic Locations for DACT3-AS1 Gene
chr19:46,660,364-46,677,456
(GRCh38/hg38)
Size:
17,093 bases
Orientation:
Plus strand
chr19:47,163,621-47,180,713
(GRCh37/hg19)

Genomic View for DACT3-AS1 Gene

Genes around DACT3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DACT3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DACT3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DACT3-AS1 Gene

Proteins for DACT3-AS1 Gene

Post-translational modifications for DACT3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DACT3-AS1 Gene

Domains & Families for DACT3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DACT3-AS1 Gene

Function for DACT3-AS1 Gene

Phenotypes From GWAS Catalog for DACT3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DACT3-AS1 Gene

Localization for DACT3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DACT3-AS1 Gene

Pathways & Interactions for DACT3-AS1 Gene

SuperPathways for DACT3-AS1 Gene

No Data Available

Interacting Proteins for DACT3-AS1 Gene

Gene Ontology (GO) - Biological Process for DACT3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DACT3-AS1 Gene

Drugs & Compounds for DACT3-AS1 Gene

No Compound Related Data Available

Transcripts for DACT3-AS1 Gene

mRNA/cDNA for DACT3-AS1 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DACT3-AS1 Gene

DACT3 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DACT3-AS1 Gene

No ASD Table

Relevant External Links for DACT3-AS1 Gene

GeneLoc Exon Structure for
DACT3-AS1
ECgene alternative splicing isoforms for
DACT3-AS1

Expression for DACT3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DACT3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DACT3-AS1 Gene

This gene is overexpressed in Testis (x14.9).

SOURCE GeneReport for Unigene cluster for DACT3-AS1 Gene:

Hs.434327
genes like me logo Genes that share expression patterns with DACT3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DACT3-AS1 Gene

Orthologs for DACT3-AS1 Gene

Evolution for DACT3-AS1 Gene

ENSEMBL:
Gene Tree for DACT3-AS1 (if available)
TreeFam:
Gene Tree for DACT3-AS1 (if available)

No data available for Orthologs for DACT3-AS1 Gene

Paralogs for DACT3-AS1 Gene

No data available for Paralogs for DACT3-AS1 Gene

Variants for DACT3-AS1 Gene

Sequence variations from dbSNP and Humsavar for DACT3-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000086866 -- 46,669,519(+) ACAGT(A/G)TGACT intron-variant
rs1000546385 -- 46,673,541(+) AGCTC(A/G)GTGAC intron-variant
rs1000708362 -- 46,659,143(+) CACTA(C/G)AGAAG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000938898 -- 46,661,158(+) CCCGC(C/T)GGCCG intron-variant, upstream-variant-2KB
rs1001021779 -- 46,673,741(+) GTGAT(C/T)TTGGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DACT3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv833849 CNV loss 17160897
esv3644534 CNV loss 21293372
esv2670391 CNV deletion 23128226

Relevant External Links for DACT3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DACT3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DACT3-AS1 Gene

Disorders for DACT3-AS1 Gene

Relevant External Links for DACT3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DACT3-AS1

No disorders were found for DACT3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DACT3-AS1 Gene

Publications for DACT3-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for DACT3-AS1 Gene

Sources for DACT3-AS1 Gene

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