 |
 | Services
| |
 |
Aliases & Descriptions for DAAM1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| FLJ41657 2 | | KIAA0666 1, 2, 3, 5 | | OTTHUMP00000179033 2 |
| | | Descriptions |
|---|
| dishevelled associated activator of morphogenesis 1 2 | | dishevelled-associated activator of morphogenesis 1 2 |
|
| | Search outside databases for aliases for DAAM1 genePrevious GC identifers: GC14P056979 GC14P053451 GC14P057645 |
Summaries for DAAM1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for DAAM1: Functions of the cell cortex, including motility, adhesion, and cytokinesis, are mediated by the reorganization of the actin cytoskeleton and recent evidence suggests a role for the Formin homology (FH) proteins in these processes. The protein encoded by this gene contains FH domains and belongs to a novel FH protein subfamily implicated in cell polarity. Wnt/Fz signaling activates the small GTPase Rho, a key regulator of cytoskeleton architecture, to control cell polarity and movement during development. Activation requires Dvl-Rho complex formation, an assembly mediated by this gene product, which is thought to function as a scaffolding protein. Evidence of alternative splicing has been observed for this gene but the full-length nature of these variants has not been determined. [provided by RefSeq] UniProtKB/Swiss-Prot: DAAM1_HUMAN, Q9Y4D1Function: Binds to disheveled (Dvl) and Rho, and mediates Wnt-induced Dvl-Rho complex formation. May play a role as a scaffolding protein to recruit Rho-GDP and Rho-GEF, thereby enhancing Rho-GTP formation. Can direct nucleation and elongation of new actin filamentsGene Wiki entry for DAAM1 |
Genomic Location for DAAM1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the DAAM1 gene 
Entrez Gene cytogenetic band: 14q23.1 Ensembl cytogenetic band: 14q23.1 HGNC cytogenetic band: 14q22.3DAAM1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 14 GeneLoc Exon Structure GeneLoc location for GC14P058725:
(about GC identifiers)
Start:
|
58,725,152 bp from pter |
End:
|
58,907,876 bp from pter |
Size:
|
182,725 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000014.7 NT_026437.11
| Proteins for DAAM1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: DAAM1_HUMAN, Q9Y4D1 (See
protein sequence)Recommended Name: Disheveled-associated activator of morphogenesis 1 Size: 1078 amino acids; 123473 Da
Subunit: Homodimer. Interacts with CIP4, FNBP1 and FNBP1L. Interacts with the SH3 domains of Abl, BTK, endophilin, spectrin and SRC. Binds specifically to GTP-bound CDC42 and RHOA
Subcellular location: Cytoplasm. Note=Perinuclear
PDB structure from and Proteopedia :2J1D (3D)
 2Z6E (3D)
 
Secondary accessions: Q86U34 Q8N1Z8 Q8TB39Alternative splicing: 3 isoforms: Q9Y4D1-1 Q9Y4D1-2 Q9Y4D1-3 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_055807.1
ENSEMBL proteins: ENSP00000247170 ENSP00000351287 ENSP00000354162 ENSP00000378557
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005737 | cytoplasm |
IEA | -- | About this table
Antibodies for DAAM1: Assays for DAAM1: | Protein
Domains/ Families for DAAM1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9Y4D1
ProtoNet protein and cluster: Q9Y4D1 2 Blocks protein families: IPB003104 Actin-binding FH2 IPB010472 Diaphanous FH3
UniProtKB/Swiss-Prot: DAAM1_HUMAN, Q9Y4D1Domain: The C-terminal DAD domain may participate in intramolecular interactions with the N-terminusSimilarity: Belongs to the formin homology familySimilarity: Contains 1 DAD (diaphanous autoregulatory) domainSimilarity: Contains 1 FH1 (formin homology 1) domainSimilarity: Contains 1 FH2 (formin homology 2) domainSimilarity: Contains 1 GBD/FH3 (Rho GTPase-binding/formin homology 3) domain | Gene Function for DAAM1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014992
Applied Biosystems Silencer® siRNAs for DAAM1
Sigma-Aldrich siRNA for DAAM1  Sigma-Aldrich shRNA for DAAM1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_014992                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014992                                  untagged cDNA clone in CMV expression vector: NM_014992 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_014992
UniProtKB/Swiss-Prot: DAAM1_HUMAN, Q9Y4D1Function: Binds to disheveled (Dvl) and Rho, and mediates Wnt-induced Dvl-Rho complex formation. May play a role as a scaffolding protein to recruit Rho-GDP and Rho-GEF, thereby enhancing Rho-GTP formation. Can direct nucleation and elongation of new actin filaments2 Gene Ontology (GO) molecular function terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0003779 | actin binding |
IEA | -- | | GO:0017048 | Rho GTPase binding |
IEA | -- | About this table | Pathways & Interactions for DAAM1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for DAAM1 
5/31 Interacting proteins for DAAM1 (ENSP000002471703 Q9Y4D12) via UniProtKB, MINT, and/or STRING (see all 31
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0016043 | cellular component organization |
IEA | -- | | GO:0030036 | actin cytoskeleton organization |
IEA | -- | About this table
|
Drugs & Compounds for DAAM1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for DAAM1
|
Transcripts for DAAM1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014992
Sigma-Aldrich siRNA for DAAM1  Sigma-Aldrich shRNA for DAAM1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_014992 REFSEQ mRNAs for DAAM1 gene: NM_014992.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_014992               OriGene GFP tagged cDNA clone in CMV expression vector: NM_014992                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014992                                  untagged cDNA clone in CMV expression vector: NM_014992  Additional cDNA sequence: AB014566.1 AK021890.1 AK023892.1 AK093813.1 AK123651.1 AK291790.1 BC024781.1 BC038428.1 BC064999.1 BX247986.1 BX648383.1 CR609221.1 10 DOTS entries: DT.452909 DT.97839555 DT.101978875 DT.100669228 DT.91955185 DT.70103627 DT.100692624 DT.100795585 DT.316327 DT.120730495 24/260 AceView cDNA sequences (see all 260
):AW090763 BI755288 BM721944 AI659015 AA487359 BE884438 BQ026874 AW238502 AL043290 AA487338 AA278828 AI292318 AI280147 AA731456 AA677452 AI452880 AA278826 AA731830 AA889970 AI688825 AB014566 F08952 BC064999 BE818918
highest scoring ESTs for DAAM1:AB014566 AA043108 AA278826 AA278828 AA487243 AA609681 AA625524 AA731456 AA731830 AA772712 Unigene Cluster for DAAM1: Dishevelled associated activator of morphogenesis 1 Hs.654934 [show with all ESTs]Unigene Representative Sequence: NM_014992
GeneLoc Exon Structure
5/8 Alternative Splicing Database (ASD) splice patterns (SP) for DAAM1 (see all 8
)
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | · | 1e | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | |
| SP1: | |   | |   | |   | |   | - |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 18a | · | 18b | ^ | 19 | ^ | 20a | · | 20b | ^ | 21a | · | 21b | ^ | 22 | ^ | 23 | ^ | 24a | · | 24b | ^ | 25 | ^ | 26 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for DAAM1
4 Ensembl transcripts including schematic representations: ENST00000351081
ENST00000358498
ENST00000360909
ENST00000395125
|
Expression for DAAM1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| DAAM1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for DAAM1
1 / 2 / 3 11 probe-sets matching DAAM1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CTTTTTTAAA
SOURCE GeneReport for Unigene cluster: Hs.654934
Expression variation in blood from EXPOLDB for DAAM1 UniProtKB/Swiss-Prot: DAAM1_HUMAN, Q9Y4D1Tissue specificity: Expressed in all tissues examined |
Orthologs for DAAM1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for DAAM1 gene from 5/12 species (see all 12
)
About this table Species with no ortholog for DAAM1
ENSEMBL Gene Tree for DAAM1 | Paralogs for DAAM1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for DAAM1 gene
- DAAM22
|
SNPs/Variants for DAAM1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for DAAM1 (up to first 250kb)
|
Disorders & Mutations for DAAM1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 606626
1 PharmGKB disease relationship for DAAM1 geneAbout this table
|
Medical News for DAAM1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for DAAM1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/17 PubMed articles for DAAM1 gene (see all 17
):- Wnt/Frizzled activation of Rho regulates vertebrate gastrulation and requires a novel Formin homology protein Daam1. (PubMed id 11779461)2, 3, 4 Habas R.... He X. (2001)
- Structure of the FH2 domain of Daam1: implications for formin regulation of actin assembly. (PubMed id 17482208)1, 3, 4 Lu J....Eck M.J. (2007)
- Mechanism of activation of the Formin protein Daam1. (PubMed id 18162551)2, 3 Liu W....Habas R. (2008)
- The diaphanous-related formin DAAM1 collaborates with the Rho GTPases RhoA and Cdc42, CIP4 and Src in regulating cell morphogenesis and actin dynamics. (PubMed id 16630611)3, 4 Aspenstroem P.... Johansson A.-S. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- The DNA sequence and analysis of human chromosome 14. (PubMed id 12508121)3, 4 Heilig R.... Weissenbach J. (2003)
- Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PubMed id 9734811)3, 4 Ishikawa K....Ohara O. (1998)
- Biochemical characterization of the Rho GTPase-regulated actin assembly by diaphanous-related formins, mDia1 and Daam1, in platelets. (PubMed id 18218625)1, 3 Higashi T....Horiuchi H. (2008)
- Crystal structure of human DAAM1 formin homology 2 domain. (PubMed id 17986009)3 Yamashita M....Nureki O. (2007)
|
Search for DAAM1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing DAAM1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing DAAM1
(According to HUGE)
About This Section
| |
Specialized Databases showing DAAM1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for DAAM1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for DAAM1:

 | |
 | | | | |
|
 |  |  |
| | | | Search Tocris compounds for DAAM1 |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|