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Aliases for CYP51A1-AS1 Gene

Subcategory (RNA class) for CYP51A1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CYP51A1-AS1 Gene

  • CYP51A1 Antisense RNA 1 2 3 5
  • CYP51A1 Antisense RNA 1 (Head To Head) 2 3
  • CTB-161K23.1 3
  • LRRD1-AS1 3

External Ids for CYP51A1-AS1 Gene

Summaries for CYP51A1-AS1 Gene

GeneCards Summary for CYP51A1-AS1 Gene

CYP51A1-AS1 (CYP51A1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP51A1-AS1 Gene

Genomics for CYP51A1-AS1 Gene

Regulatory Elements for CYP51A1-AS1 Gene

Enhancers for CYP51A1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G092423 1.6 FANTOM5 Ensembl ENCODE 10.8 +290.1 290138 2.2 HDGF PKNOX1 MLX CREB3L1 ARNT ARID4B SIN3A YBX1 DMAP1 ZNF2 FAM133B CYP51A1-AS1 TMBIM7P GC07P092389
GH07G091694 0.4 ENCODE 5 -439.9 -439924 1.1 NR2F2 CYP51A1-AS1 ENSG00000223665 GC07P091818
GH07G092132 1.2 ENCODE 0.7 -0.1 -144 3.9 CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC CYP51A1 ENSG00000243107 GATAD1 KRIT1 CYP51A1-AS1 GC07P092082
GH07G092100 0.4 ENCODE 0.3 -33.9 -33929 1.2 CREB1 GC07P092082 CYP51A1-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYP51A1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CYP51A1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000215073 -563 3201 CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC

Genomic Location for CYP51A1-AS1 Gene

Chromosome:
7
Start:
92,134,563 bp from pter
End:
92,180,725 bp from pter
Size:
46,163 bases
Orientation:
Plus strand

Genomic View for CYP51A1-AS1 Gene

Genes around CYP51A1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP51A1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP51A1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP51A1-AS1 Gene

Proteins for CYP51A1-AS1 Gene

Post-translational modifications for CYP51A1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP51A1-AS1 Gene

Domains & Families for CYP51A1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP51A1-AS1 Gene

Function for CYP51A1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP51A1-AS1 Gene

Localization for CYP51A1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYP51A1-AS1 Gene

Pathways & Interactions for CYP51A1-AS1 Gene

SuperPathways for CYP51A1-AS1 Gene

No Data Available

Interacting Proteins for CYP51A1-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP51A1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP51A1-AS1 Gene

Drugs & Compounds for CYP51A1-AS1 Gene

No Compound Related Data Available

Transcripts for CYP51A1-AS1 Gene

mRNA/cDNA for CYP51A1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYP51A1-AS1 Gene

No ASD Table

Relevant External Links for CYP51A1-AS1 Gene

GeneLoc Exon Structure for
CYP51A1-AS1
ECgene alternative splicing isoforms for
CYP51A1-AS1

Expression for CYP51A1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYP51A1-AS1 Gene

genes like me logo Genes that share expression patterns with CYP51A1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYP51A1-AS1 Gene

Orthologs for CYP51A1-AS1 Gene

Evolution for CYP51A1-AS1 Gene

ENSEMBL:
Gene Tree for CYP51A1-AS1 (if available)
TreeFam:
Gene Tree for CYP51A1-AS1 (if available)

No data available for Orthologs for CYP51A1-AS1 Gene

Paralogs for CYP51A1-AS1 Gene

No data available for Paralogs for CYP51A1-AS1 Gene

Variants for CYP51A1-AS1 Gene

Sequence variations from dbSNP and Humsavar for CYP51A1-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000038509 -- 92,140,425(+) AGAGG(C/T)TGAGG intron-variant
rs1000069436 -- 92,165,729(+) GGTAG(C/T)GGGCG intron-variant, upstream-variant-2KB
rs1000138814 -- 92,157,005(+) GGAAA(C/T)TGTAT intron-variant
rs1000344867 -- 92,158,055(+) AATTA(A/G)GGCTA intron-variant
rs1000357260 -- 92,180,810(+) CTTTT(C/G)TTTTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for CYP51A1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2734818 CNV deletion 23290073
esv3614136 CNV loss 21293372
esv3614137 CNV loss 21293372
nsv1114987 CNV deletion 24896259
nsv5839 CNV insertion 18451855

Relevant External Links for CYP51A1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP51A1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CYP51A1-AS1 Gene

Disorders for CYP51A1-AS1 Gene

Relevant External Links for CYP51A1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CYP51A1-AS1

No disorders were found for CYP51A1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CYP51A1-AS1 Gene

Publications for CYP51A1-AS1 Gene

  1. Expression pattern of long non-coding RNAs in renal cell carcinoma revealed by microarray. (PMID: 24905231) Qin C. … Yin C. (PLoS ONE 2014) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CYP51A1-AS1 Gene

Sources for CYP51A1-AS1 Gene

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