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Aliases for CYP4A22-AS1 Gene

Subcategory (RNA class) for CYP4A22-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CYP4A22-AS1 Gene

  • CYP4A22 Antisense RNA 1 2 3 5
  • CYP4A22 Antisense RNA 1 (Non-Protein Coding) 2 3
  • NcRNA-A3 3

External Ids for CYP4A22-AS1 Gene

Previous GeneCards Identifiers for CYP4A22-AS1 Gene

  • GC01M047562

Summaries for CYP4A22-AS1 Gene

GeneCards Summary for CYP4A22-AS1 Gene

CYP4A22-AS1 (CYP4A22 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP4A22-AS1 Gene

Genomics for CYP4A22-AS1 Gene

Regulatory Elements for CYP4A22-AS1 Gene

Enhancers for CYP4A22-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G047322 1 ENCODE dbSUPER 10.1 -145.4 -145436 3.6 HDAC1 ELF3 CEBPG FEZF1 THRB FOXK2 ZSCAN5C KLF13 SMAD5 HLF ENSG00000226252 CMPK1 TAL1 CYP4A22-AS1 LINC00853 FOXE3 GC01M047322 GC01P047330
GH01G047477 1 ENCODE 9.1 -298.7 -298691 1.5 PKNOX1 FOXA2 MLX ARID4B ZNF48 YY1 SLC30A9 SP5 ZHX2 MXD4 FOXD2 FOXD2-AS1 LINC01389 FOXE3 CYP4A22-AS1 LINC00853 ENSG00000271355 GC01M047436
GH01G047253 0.8 ENCODE 11 -75.0 -74958 1.4 SOX13 SAP130 ZNF384 CEBPG TEAD3 ZNF664 NR2F6 CREM SOX5 GATAD2A TAL1 ENSG00000226252 CMPK1 CYP4A22-AS1 LINC00853 FOXD2-AS1 FOXD2 GC01M047285
GH01G047107 0.8 Ensembl ENCODE 10.7 +71.1 71147 2.0 CEBPG HNF4A FOS ZIC2 PRDM1 CYP4A22 CYP4A22-AS1 LINC00853 CYP4Z1 GC01M047099 LOC100533626
GH01G047252 0.6 FANTOM5 11 -73.3 -73323 0.3 PKNOX1 ZSCAN4 SREBF1 POLR2H FOSL1 JUND ATF3 PBX2 FOS CMPK1 TAL1 ENSG00000226252 CYP4A22-AS1 LINC00853 FOXD2 FOXD2-AS1 GC01M047285
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYP4A22-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CYP4A22-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000006023 -29 601 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF766 ZNF143 DEK ZNF263

Genomic Location for CYP4A22-AS1 Gene

Chromosome:
1
Start:
47,096,653 bp from pter
End:
47,179,271 bp from pter
Size:
82,619 bases
Orientation:
Minus strand

Genomic View for CYP4A22-AS1 Gene

Genes around CYP4A22-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP4A22-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP4A22-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CYP4A22-AS1 Gene

Proteins for CYP4A22-AS1 Gene

Post-translational modifications for CYP4A22-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP4A22-AS1 Gene

Domains & Families for CYP4A22-AS1 Gene

Gene Families for CYP4A22-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CYP4A22-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP4A22-AS1 Gene

Function for CYP4A22-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP4A22-AS1 Gene

Localization for CYP4A22-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYP4A22-AS1 Gene

Pathways & Interactions for CYP4A22-AS1 Gene

SuperPathways for CYP4A22-AS1 Gene

No Data Available

Interacting Proteins for CYP4A22-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP4A22-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP4A22-AS1 Gene

Drugs & Compounds for CYP4A22-AS1 Gene

No Compound Related Data Available

Transcripts for CYP4A22-AS1 Gene

mRNA/cDNA for CYP4A22-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYP4A22-AS1 Gene

No ASD Table

Relevant External Links for CYP4A22-AS1 Gene

GeneLoc Exon Structure for
CYP4A22-AS1
ECgene alternative splicing isoforms for
CYP4A22-AS1

Expression for CYP4A22-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYP4A22-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CYP4A22-AS1 Gene

This gene is overexpressed in Kidney - Cortex (x16.2).
genes like me logo Genes that share expression patterns with CYP4A22-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYP4A22-AS1 Gene

Orthologs for CYP4A22-AS1 Gene

Evolution for CYP4A22-AS1 Gene

ENSEMBL:
Gene Tree for CYP4A22-AS1 (if available)
TreeFam:
Gene Tree for CYP4A22-AS1 (if available)

No data available for Orthologs for CYP4A22-AS1 Gene

Paralogs for CYP4A22-AS1 Gene

No data available for Paralogs for CYP4A22-AS1 Gene

Variants for CYP4A22-AS1 Gene

Relevant External Links for CYP4A22-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP4A22-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYP4A22-AS1 Gene

Disorders for CYP4A22-AS1 Gene

No disorders were found for CYP4A22-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYP4A22-AS1 Gene

Publications for CYP4A22-AS1 Gene

  1. Long noncoding RNAs with enhancer-like function in human cells. (PMID: 20887892) A9rom U.A. … Shiekhattar R. (Cell 2010) 2 3 64

Products for CYP4A22-AS1 Gene

Sources for CYP4A22-AS1 Gene

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