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Aliases for CYP4A22-AS1 Gene

Subcategory (RNA class) for CYP4A22-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CYP4A22-AS1 Gene

  • CYP4A22 Antisense RNA 1 2 3 5
  • CYP4A22 Antisense RNA 1 (Non-Protein Coding) 2 3
  • NcRNA-A3 3

External Ids for CYP4A22-AS1 Gene

Previous GeneCards Identifiers for CYP4A22-AS1 Gene

  • GC01M047562

Summaries for CYP4A22-AS1 Gene

GeneCards Summary for CYP4A22-AS1 Gene

CYP4A22-AS1 (CYP4A22 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP4A22-AS1 Gene

Genomics for CYP4A22-AS1 Gene

Regulatory Elements for CYP4A22-AS1 Gene

Enhancers for CYP4A22-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F047477 1 ENCODE 9.1 -298.7 -298691 1.5 PKNOX1 MLX ARID4B ZNF48 SLC30A9 SP5 MXD4 MIER2 PPARG MIER3 FOXD2 FOXD2-AS1 LINC01389 FOXE3 CYP4A22-AS1 LINC00853 ENSG00000271355 GC01M047436
GH01F047253 0.7 ENCODE 11 -75.0 -74958 1.4 SOX13 SAP130 ZNF384 CEBPG TEAD3 ZNF664 NR2F6 CREM SOX5 GATAD2A TAL1 ENSG00000226252 CMPK1 CYP4A22-AS1 LINC00853 FOXD2 FOXD2-AS1 GC01M047285
GH01F047107 0.7 Ensembl ENCODE 10.7 +71.1 71147 2.0 ZIC2 PRDM1 CYP4A22 CYP4A22-AS1 LINC00853 CYP4Z1 GC01M047099 LOC100533626
GH01F047322 0.7 ENCODE 10.1 -145.4 -145436 3.6 ELF3 HLF CEBPB CEBPG FEZF1 THRB ZSCAN16 IKZF1 ZNF24 IRF1 ENSG00000226252 CMPK1 TAL1 CYP4A22-AS1 LINC00853 FOXE3 GC01M047322 GC01P047330
GH01F047252 0.6 FANTOM5 11 -73.3 -73323 0.3 POLR2H SREBF1 PKNOX1 JUND ATF3 PBX2 FOS CMPK1 TAL1 ENSG00000226252 CYP4A22-AS1 LINC00853 FOXD2 FOXD2-AS1 GC01M047285
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYP4A22-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CYP4A22-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000076981 70 1200 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF143 ZNF263 SP3 NFYC

Genomic Location for CYP4A22-AS1 Gene

Chromosome:
1
Start:
47,096,653 bp from pter
End:
47,179,271 bp from pter
Size:
82,619 bases
Orientation:
Minus strand

Genomic View for CYP4A22-AS1 Gene

Genes around CYP4A22-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP4A22-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP4A22-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CYP4A22-AS1 Gene

Proteins for CYP4A22-AS1 Gene

Post-translational modifications for CYP4A22-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP4A22-AS1 Gene

Domains & Families for CYP4A22-AS1 Gene

Gene Families for CYP4A22-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CYP4A22-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP4A22-AS1 Gene

Function for CYP4A22-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP4A22-AS1 Gene

Localization for CYP4A22-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYP4A22-AS1 Gene

Pathways & Interactions for CYP4A22-AS1 Gene

SuperPathways for CYP4A22-AS1 Gene

No Data Available

Interacting Proteins for CYP4A22-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP4A22-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP4A22-AS1 Gene

Transcripts for CYP4A22-AS1 Gene

mRNA/cDNA for CYP4A22-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYP4A22-AS1 Gene

No ASD Table

Relevant External Links for CYP4A22-AS1 Gene

GeneLoc Exon Structure for
CYP4A22-AS1
ECgene alternative splicing isoforms for
CYP4A22-AS1

Expression for CYP4A22-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYP4A22-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CYP4A22-AS1 Gene

This gene is overexpressed in Kidney - Cortex (x16.2).
genes like me logo Genes that share expression patterns with CYP4A22-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYP4A22-AS1 Gene

Orthologs for CYP4A22-AS1 Gene

Evolution for CYP4A22-AS1 Gene

ENSEMBL:
Gene Tree for CYP4A22-AS1 (if available)
TreeFam:
Gene Tree for CYP4A22-AS1 (if available)

No data available for Orthologs for CYP4A22-AS1 Gene

Paralogs for CYP4A22-AS1 Gene

No data available for Paralogs for CYP4A22-AS1 Gene

Variants for CYP4A22-AS1 Gene

Relevant External Links for CYP4A22-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP4A22-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYP4A22-AS1 Gene

Disorders for CYP4A22-AS1 Gene

No disorders were found for CYP4A22-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYP4A22-AS1 Gene

Publications for CYP4A22-AS1 Gene

  1. Long noncoding RNAs with enhancer-like function in human cells. (PMID: 20887892) A9rom U.A. … Shiekhattar R. (Cell 2010) 2 3 64

Products for CYP4A22-AS1 Gene

Sources for CYP4A22-AS1 Gene

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