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Aliases for CYP2T1P Gene

Aliases for CYP2T1P Gene

  • Cytochrome P450 Family 2 Subfamily T Member 1, Pseudogene 2 3 5
  • Cytochrome P450, Family 2, Subfamily T, Polypeptide 2, Pseudogene 2 3
  • Cytochrome P450, Family 2, Subfamily T, Polypeptide 1, Pseudogene 2 3
  • Cytochrome P450, Subfamily IIT, Polypeptide 2 Pseudogene 2 3
  • Cytochrome P450, Family 2, Subfamily F, Polypeptide 1 Pseudogene 3
  • CYP2T2P 3

External Ids for CYP2T1P Gene

Previous HGNC Symbols for CYP2T1P Gene

  • CYP2T2P

Summaries for CYP2T1P Gene

GeneCards Summary for CYP2T1P Gene

CYP2T1P (Cytochrome P450 Family 2 Subfamily T Member 1, Pseudogene) is a Pseudogene.

Additional gene information for CYP2T1P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP2T1P Gene

Genomics for CYP2T1P Gene

Regulatory Elements for CYP2T1P Gene

Enhancers for CYP2T1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H041348 1.4 ENCODE dbSUPER 19.8 -540.2 -540222 6 HDGF PKNOX1 ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF143 ZNF207 SP3 ZNF574 ZNF526 SNRPA HNRNPUL1 CCDC97 ENSG00000269843 COQ8B ITPKC CIC CYP2G1P
GH19H040420 2 FANTOM5 Ensembl ENCODE dbSUPER 11.1 +387.8 387815 6 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZNF610 GLIS1 HNRNPUL1 CCDC97 SERTAD3 ITPKC SNRPA FBL AKT2 ENSG00000269843 SUPT5H CYP2T1P
GH19H040796 2 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +9.1 9055 11 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF416 ZNF143 SP3 NFYC ZFP41 ZNF780B HNRNPUL1 SNRPA ENSG00000269843 CCDC97 COQ8B NUMBL CYP2G1P FBL ITPKC
GH19H040747 1.8 FANTOM5 ENCODE dbSUPER 10.7 +58.6 58631 9 MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 ZNF416 ZNF143 SP3 NFYC HNRNPUL1 SNRPA ENSG00000269843 CCDC97 COQ8B ZNF780A AKT2 ZNF780B ITPKC FBL
GH19H039831 1.4 ENCODE dbSUPER 10.5 +977.9 977942 3 HDGF PKNOX1 SIN3A FEZF1 ZNF2 YY1 ZNF143 ZNF207 ZNF548 FOS HNRNPL SNRPA FBL AKT2 RN7SL566P COQ8B PLEKHG2 ZNF780A ZNF780B ENSG00000269688
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYP2T1P on UCSC Golden Path with GeneCards custom track

Promoters for CYP2T1P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000109590 392 401 HDAC1 ATF1 SIN3A KLF17 ATF7 SP3 ZBTB2 ELF1 NR2F2 ZNF592

Genomic Location for CYP2T1P Gene

Chromosome:
19
Start:
40,808,474 bp from pter
End:
40,811,392 bp from pter
Size:
2,919 bases
Orientation:
Minus strand

Genomic View for CYP2T1P Gene

Genes around CYP2T1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP2T1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP2T1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP2T1P Gene

Proteins for CYP2T1P Gene

Post-translational modifications for CYP2T1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP2T1P Gene

Domains & Families for CYP2T1P Gene

Gene Families for CYP2T1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CYP2T1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP2T1P Gene

Function for CYP2T1P Gene

Phenotypes From GWAS Catalog for CYP2T1P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CYP2T1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP2T1P Gene

Localization for CYP2T1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYP2T1P Gene

Pathways & Interactions for CYP2T1P Gene

SuperPathways for CYP2T1P Gene

No Data Available

Interacting Proteins for CYP2T1P Gene

Gene Ontology (GO) - Biological Process for CYP2T1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP2T1P Gene

Drugs & Compounds for CYP2T1P Gene

No Compound Related Data Available

Transcripts for CYP2T1P Gene

mRNA/cDNA for CYP2T1P Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CYP2T1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CYP2T1P Gene

No ASD Table

Relevant External Links for CYP2T1P Gene

GeneLoc Exon Structure for
CYP2T1P
ECgene alternative splicing isoforms for
CYP2T1P

Expression for CYP2T1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYP2T1P Gene

NURSA nuclear receptor signaling pathways regulating expression of CYP2T1P Gene:

CYP2T1P
genes like me logo Genes that share expression patterns with CYP2T1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYP2T1P Gene

Orthologs for CYP2T1P Gene

Evolution for CYP2T1P Gene

ENSEMBL:
Gene Tree for CYP2T1P (if available)
TreeFam:
Gene Tree for CYP2T1P (if available)

No data available for Orthologs for CYP2T1P Gene

Paralogs for CYP2T1P Gene

No data available for Paralogs for CYP2T1P Gene

Variants for CYP2T1P Gene

Sequence variations from dbSNP and Humsavar for CYP2T1P Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000898978 -- 40,810,778(+) CAGTG(C/T)CCACC nc-transcript-variant
rs1001610245 -- 40,808,005(+) TCTGT(C/T)GCTGA intron-variant, nc-transcript-variant, utr-variant-3-prime
rs1002351793 -- 40,811,324(+) GTAGC(C/T)GCACA upstream-variant-2KB
rs1002558940 -- 40,808,029(+) GAAGA(A/G)ACCTT intron-variant, nc-transcript-variant, utr-variant-3-prime
rs1002717216 -- 40,812,145(+) TTCCA(A/G)GGGGT upstream-variant-2KB

Relevant External Links for CYP2T1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP2T1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYP2T1P Gene

Disorders for CYP2T1P Gene

Relevant External Links for CYP2T1P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CYP2T1P

No disorders were found for CYP2T1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CYP2T1P Gene

Publications for CYP2T1P Gene

  1. Organization, structure and evolution of the CYP2 gene cluster on human chromosome 19. (PMID: 11692077) Hoffman SM … Keeney DS (Pharmacogenetics 2001) 2 3 60
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3 60
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  5. Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes, including nomenclature recommendations for genes, pseudogenes and alternative-splice variants. (PMID: 15128046) Nelson DR … Nebert DW (Pharmacogenetics 2004) 3 60

Products for CYP2T1P Gene

Sources for CYP2T1P Gene

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