CYP2E1 Gene
protein-coding GIFtS: 69
GC10P135229
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cytochrome P450, family 2, subfamily E, polypeptide 1 (Previous names: cytochrome P450, subfamily IIE (ethanol-inducible), polypeptide 1 ) Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbol: CYP2E)
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Aliases & Descriptions for CYP2E1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CPE1 2 | | CYP2E 2, 3, 5 | | CYPIIE1 3 | | EC 1.14.13.-,EC 1.14.13.n7 3 | | OTTHUMP00000020813 2 | | OTTHUMP00000046571 2 | | P450-J 2, 3 | | P450C2E 2, 5 |
| | | Descriptions |
|---|
| 4-nitrophenol 2-hydroxylase 3 | | cytochrome P450 2E1 2 | | cytochrome P450, family 2, subfamily E, polypeptide 1 2 | cytochrome P450, subfamily IIE (ethanol-inducible), polypeptide 1 1, 2 | | flavoprotein-linked monooxygenase 2 | | microsomal monooxygenase 2 | | xenobiotic monooxygenase 2 |
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| | Search outside databases for aliases for CYP2E1 genePrevious GC identifers: GC10P134255 GC10P134470 GC10P135256 GC10P134814 |
Summaries for CYP2E1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CYP2E1: This gene encodes a member of the cytochrome P450 superfamily of enzymes. The cytochrome P450 proteins are monooxygenases which catalyze many reactions involved in drug metabolism and synthesis of cholesterol, steroids and other lipids. This protein localizes to the endoplasmic reticulum and is induced by ethanol, the diabetic state, and starvation. The enzyme metabolizes both endogenous substrates, such as ethanol, acetone, and acetal, as well as exogenous substrates including benzene, carbon tetrachloride, ethylene glycol, and nitrosamines which are premutagens found in cigarette smoke. Due to its many substrates, this enzyme may be involved in such varied processes as gluconeogenesis, hepatic cirrhosis, diabetes, and cancer. [provided by RefSeq] UniProtKB/Swiss-Prot: CP2E1_HUMAN, P05181Function: Metabolizes several precarcinogens, drugs, and solvents to reactive metabolites. Inactivates a number of drugs and xenobiotics and also bioactivates many xenobiotic substrates to their hepatotoxic or carcinogenic formsGene Wiki entry for CYP2E1 |
Genomic Location for CYP2E1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CYP2E1 gene 
Entrez Gene cytogenetic band: 10q24.3-qter Ensembl cytogenetic band: 10q26.3 HGNC chromosome: 10CYP2E1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10P135229:
(about GC identifiers)
Start:
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135,190,857 bp from pter |
End:
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135,224,714 bp from pter |
Size:
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33,858 bases |
Orientation:
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plus strand |
RefSeq DNA sequence:- NC_000010.9 NT_017795.18
| Proteins for CYP2E1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CP2E1_HUMAN, P05181 (See
protein sequence)Recommended Name: Cytochrome P450 2E1 Size: 493 amino acids; 56849 Da
Cofactor: Heme group (By similarity)
Subcellular location: Endoplasmic reticulum membrane; Peripheral membrane protein. Microsome membrane; Peripheral membrane protein
PDB structure from and Proteopedia :3E4E (3D)
 3E6I (3D)
 
Secondary accessions: Q5VZD5 Q9UK47Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_000764.1
ENSEMBL proteins: ENSP00000252945 ENSP00000357506
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CYP2E1: Assays for CYP2E1: | Protein
Domains/ Families for CYP2E1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P05181
ProtoNet protein and cluster: P05181 2 Blocks protein families: IPB002401 E-class P450 group I signature IPB008070 CYP2E P450 family signature
UniProtKB/Swiss-Prot: CP2E1_HUMAN, P05181Similarity: Belongs to the cytochrome P450 family | Gene Function for CYP2E1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000773
Applied Biosystems Silencer® siRNAs for CYP2E1
Sigma-Aldrich siRNA and siRNA Panels for CYP2E1  Sigma-Aldrich shRNA for CYP2E1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000773                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000773                                  untagged cDNA clone in CMV expression vector: NM_000773 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000773
UniProtKB/Swiss-Prot: CP2E1_HUMAN, P05181Function: Metabolizes several precarcinogens, drugs, and solvents to reactive metabolites. Inactivates a number of drugs and xenobiotics and also bioactivates many xenobiotic substrates to their hepatotoxic or carcinogenic formsCatalytic activity: 4-nitrophenol + NADPH + O(2) = 4-nitrocatechol + NADP(+) + H(2)OInduction: By ethanol and isoniazidEnzyme Number (IUBMB): EC 1.14.13.-,EC 5 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Cyp2e1):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CYP2E1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
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5/6 Sigma-Aldrich "Your Favorite Gene" Pathways for CYP2E1 (Your Favorite Gene powered by Ingenuity) (see all 6
) 
Gene Network CentralTM Interacting Genes and Proteins Network for CYP2E1 
5/114 Interacting proteins for CYP2E1 (ENSP000002529453) via UniProtKB, MINT, and/or STRING (see all 114
)About this table
1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
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| GO:0055114 | oxidation reduction |
IEA | -- | About this table
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Drugs & Compounds for CYP2E1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
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Enzo Life Sciences drugs & compounds for CYP2E1 |
Browse Tocris compounds for CYP2E1 10/63 Novoseek chemical compound relationships for CYP2E1 gene (see all 63
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| 6-hydroxychlorzoxazone |
91.97 |
22 |
10490907 (2), 12585472 (2), 17119944 (1), 9322481 (1) (see all 16) |
| rsai |
88.36 |
52 |
8547826 (4), 7534543 (4), 9825833 (3), 8977352 (2) (see all 32) |
| dimethylnitrosamine |
81.69 |
23 |
8622629 (1), 9675256 (1), 17567472 (1), 18378564 (1) (see all 20) |
| p-nitrophenol |
80.95 |
40 |
15135088 (4), 17584020 (2), 14669323 (2), 14556645 (2) (see all 26) |
| nitrosamines |
75.22 |
28 |
15242818 (4), 17146594 (2), 9806171 (2), 18818195 (1) (see all 17) |
| chlorodifluoroacetic acid |
75.20 |
2 |
12451447 (1) |
| epoxide |
75.05 |
30 |
8232220 (2), 16039674 (2), 8377657 (1), 8236284 (1) (see all 26) |
| ethanol |
73.69 |
300 |
10029205 (6), 11602665 (5), 8632758 (5), 17284772 (5) (see all 99) |
| glycidamide |
72.05 |
9 |
19131562 (1), 17088317 (1), 18624445 (1), 16337756 (1) |
| 7-ethoxy-4-trifluoromethylcoumarin |
71.30 |
9 |
12490624 (3), 15205384 (1), 15829437 (1), 9241656 (1) |
About this table
9 PharmGKB drug compound relationships for CYP2E1 geneAbout this table
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Transcripts for CYP2E1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000773
Sigma-Aldrich siRNA and siRNA Panels for CYP2E1  Sigma-Aldrich shRNA for CYP2E1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000773 REFSEQ mRNAs for CYP2E1 gene: NM_000773.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000773               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000773                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000773                                  untagged cDNA clone in CMV expression vector: NM_000773  Additional cDNA sequence: AF084225.1 AF182276.1 AJ853939.1 AJ853940.1 AJ877238.1 AK290822.1 BC067433.1 BC067435.1 CR592801.1 CR603555.1 CR618024.1 CR621945.1 CR622294.1 CR626742.1 CR626746.1 DQ149222.1 J02625.1 S77873.1 14 DOTS entries: DT.444621 DT.99987835 DT.92449334 DT.121278796 DT.91699780 DT.92449330 DT.100772634 DT.100798406 DT.40296356 DT.40227062 DT.92449335 DT.100798402 DT.100798404 DT.92449336 24/154 AceView cDNA sequences (see all 154
):AV697094 CR618024 CR603555 CR626746 AL531476 CR621945 AL558632 CB124845 CA311379 CR592801 BQ879759 BX449120 CB154278 T64762 CR622294 BX951454 CR626742 BM547116 CB147267 BG567046 AA423809 AF182276 AL532016 BG545098
highest scoring ESTs for CYP2E1:J02625 AF084225 AF182276 AL532015 AL532220 AL564269 AL564573 AL580410 AV682019 AV718404 Unigene Cluster for CYP2E1: Cytochrome P450, family 2, subfamily E, polypeptide 1 Hs.12907 [show with all ESTs]Unigene Representative Sequence: NM_000773
GeneLoc Exon Structure
5/8 Alternative Splicing Database (ASD) splice patterns (SP) for CYP2E1 (see all 8
)
| ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4a | · | 4b | ^ | 5a | · | 5b | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9a | · | 9b | ^ | 10a | · | 10b | ^ | 11a | · | 11b | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | - |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CYP2E1
2 Ensembl transcripts including schematic representations: ENST00000252945
ENST00000368520
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Expression for CYP2E1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CYP2E1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CYP2E1
1 / 2 / 3 9 probe-sets matching CYP2E1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AGTGTGTGGA
SOURCE GeneReport for Unigene cluster: Hs.12907
Expression variation in blood from EXPOLDB for CYP2E1 |
Orthologs for CYP2E1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CYP2E1 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for CYP2E1
ENSEMBL Gene Tree for CYP2E1 | Paralogs for CYP2E1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CYP2E1 gene
- CYP2C82 CYP2C92 CYP2C192 CYP2C182
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SNPs/Variants for CYP2E1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
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HapMap Linkage Disequilibrium images for CYP2E1 (up to first 250kb)
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Disorders & Mutations for CYP2E1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 124040
10/83 Novoseek disease relationships for CYP2E1 gene (see all 83
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| liver diseases alcoholic |
76.11 |
40 |
9453426 (7), 11410736 (4), 19157621 (4), 9731720 (3) (see all 15) |
| hepatitis halothane |
66.70 |
7 |
8794896 (4), 8902272 (2) |
| fatty liver alcoholic |
56.16 |
2 |
15670659 (1), 14606109 (1) |
| liver diseases |
55.45 |
36 |
12883487 (2), 12743671 (2), 11748356 (2), 16380384 (2) (see all 23) |
| genetic susceptibility |
55.26 |
6 |
11751440 (1), 9829710 (1), 15138035 (1), 16324524 (1) (see all 6) |
| alcoholic cirrhosis |
54.29 |
16 |
19428381 (2), 11748356 (2), 9660317 (1), 14720455 (1) (see all 8) |
| alcoholism |
53.89 |
27 |
7573775 (3), 9660317 (2), 15902904 (2), 9695719 (2) (see all 12) |
| liver damage |
52.36 |
13 |
15554233 (2), 9453426 (2), 9248625 (1), 15036355 (1) (see all 8) |
| fatty liver |
51.73 |
11 |
14606109 (3), 12883487 (1), 15554233 (1), 16321567 (1) (see all 5) |
| cancer lung |
46.55 |
49 |
9029171 (4), 7534543 (4), 10209943 (3), 18798003 (3) (see all 26) |
About this table
3 PharmGKB disease relationships for CYP2E1 geneAbout this table
Human Gene Mutation Database: CYP2E1 Genetic Association Database: CYP2E1 Human Genome Epidemiology Navigator: CYP2E1 (281 documents)
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Medical News for CYP2E1(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for CYP2E1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/968 PubMed articles for CYP2E1 gene (see all 968
):- Detection and characterization of novel polymorphisms in the CYP2E1 gene. (PubMed id 9918138)3, 4, 7 Fairbrother K.S.... Daly A.K. (1998)
- Genetic polymorphisms of aldehyde dehydrogenase 2, cytochrome p450 2E1 for liver cancer risk in HCV antibody-positive japanese patients and the variations of CYP2E1 mRNA expression levels in the liver due to its polymorphism. (PubMed id 12940444)1, 3, 6 Kato S....Naito Z. (2003)
- [Associations of Rsa I polymorphism at the 5' flanking region of CYP2E1 and PON2 148 polymorphism in neonates with preterm delivery] (PubMed id 12939804)1, 3, 6 Wu B.Y....Xu X.P. (2003)
- [Association of CYP2E1 of PON2311 polymorphisms in neonates with preterm] (PubMed id 12561466)1, 3, 6 Liang H.Y....Xu X.P. (2002)
- ALDH2 and CYP2E1 genotypes, urinary acetaldehyde excretion and the health consequences in moderate alcohol consumers. (PubMed id 16365683)1, 3, 6 Yamada Y....Honda R. (2006)
- A polymorphism in the 5'-flanking region of the CYP2E1 gene and elevated lung adenocarcinoma risk in a Japanese population. (PubMed id 16142352)1, 3, 6 Iizasa T....Fujisawa T. (2005)
- Effects of dietary intake and genetic factors on hypermethylation of the hMLH1 gene promoter in gastric cancer. (PubMed id 15991278)1, 3, 6 Nan H.M....Kim H. (2005)
- Effects of genetic polymorphisms in metabolic enzymes on the relationships between 8-hydroxydeoxyguanosine levels in human leukocytes and urinary 1-hydroxypyrene and 2-naphthol concentrations. (PubMed id 14646291)1, 3, 6 Kim Y.D....Kim H. (2003)
- Role of epoxide hydrolase, NAD(P)H:quinone oxidoreductase, cytochrome P450 2E1 or alcohol dehydrogenase genotypes in susceptibility to colorectal cancer. (PubMed id 16039674)1, 3, 6 van der Logt E.M....Peters W.H. (2006)
- Genetic polymorphisms in the cytochromes P-450 (1A1, 2E1), microsomal epoxide hydrolase and glutathione S-transferase M1, T1, and P1 genes, and their relationship with chronic bronchitis and relapsing pneumonia in children. (PubMed id 15928955)1, 3, 6 Korytina G.F....Victorova T.V. (2005)
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Search for CYP2E1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
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Genome Databases showing CYP2E1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CYP2E1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CYP2E1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| ATLAS Chromosomes in Cancer entry for CYP2E1 | Genetics and Cytogenetics in Oncology and Haematology | | Cytochrome P450 Allele Nomenclature Committee | http://www.cypalleles.ki.se/cyp2e1.htm | | Wikipedia | http://en.wikipedia.org/wiki/CYP2E1 | | NIEHS-SNPs | http://egp.gs.washington.edu/data/cyp2e1/ |
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| | | About This Section
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| Services for CYP2E1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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