CYP2A7P1 Gene
pseudogene GIFtS: 23
GCID: GC19M041415
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cytochrome P450, family 2, subfamily A, polypeptide 7 pseudogene...(Previous names: cytochrome P450, subfamily IIA (phenobarbital-inducible),...)
(Previous symbol: CYP2A7P2)
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Aliases
for CYP2A7P1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Cytochrome P450, Family 2, Subfamily A, Polypeptide 7 Pseudogene 11 2 | | CYP2A18PC1 2 | | CYP2A18PN1 2 | | CYP2A7P21 2 | | CYP2A7PT1 2 | | Cytochrome P450, Subfamily IIA (Phenobarbital-Inducible), Polypeptide 7,Pseudogene 11 |
Export aliases for CYP2A7P1 gene to outside databasesPrevious GC identifers: GC19U990023 GC19M046090 GC19M046105 GC19M037847 |
Summaries
for CYP2A7P1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
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Genomic Views
for CYP2A7P1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000019.9 NC_018930.1 NT_011109.16
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for CYP2A7P1
Other transcription factors
Search SABiosciences Chromatin IP Primers for CYP2A7P1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CYP2A7P1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 19q13.2 Ensembl cytogenetic band: 19q13.2 HGNC cytogenetic band: 19q13.2CYP2A7P1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19M041415: view genomic region
(about GC identifiers)
Start:
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41,414,136 bp from pter |
End:
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41,533,990 bp from pter |
Size:
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119,855 bases |
Orientation:
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minus strand |
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Proteins
for CYP2A7P1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
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UniProtKB: --
CYP2A7P1 Protein expression data from MOPED and PaxDb: About this image 
ENSEMBL proteins: ENSP00000301171
Human Recombinant Protein Products:
Antibody Products for CYP2A7P1:
Assay Products for CYP2A7P1: |
Protein
Domains /
Families
for CYP2A7P1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
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Function
for CYP2A7P1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
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Function Summary:
Genatlas biochemistry entry for CYP2A7P1:cytochrome P450,subfamily IIA (phenobarbital-inducible),polypeptide 7,pseudogene 1
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
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| GO:0009055 | electron carrier activity |
-- | -- | | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
-- | -- | | GO:0020037 | heme binding |
-- | -- |
CYP2A7P1 for ontologies About GeneDecksing
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Pathways & Interactions
for CYP2A7P1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
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Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CYP2A7P1
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Drugs & Compounds
for CYP2A7P1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
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CYP2A7P1 for compounds About GeneDecksing
 Browse Tocris compounds for CYP2A7P1
2 PharmGKB related drug/compound annotations for CYP2A7P1 geneAbout this table
Search CenterWatch for drugs/clinical trials and news about CYP2A7P1 
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Transcripts
for CYP2A7P1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
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Unigene Cluster for CYP2A7P1: Cytochrome P450, family 2, subfamily A, polypeptide 7 pseudogene 1 Hs.733030 Unigene Representative Sequence: U220441 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000301171(uc002ops.1)
Additional cDNA sequence: U22030.1 U22044.1 2 DOTS entries: DT.100796642 DT.102836902 2 AceView cDNA sequences: BF869985 BF873337
GeneLoc Exon Structure
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Expression
for CYP2A7P1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| CYP2A7P1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: ATGCTGGAAA
About this image
See CYP2A7P1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for CYP2A7P1
SOURCE GeneReport for Unigene cluster: Hs.733030
SABiosciences Custom PCR Arrays for CYP2A7P1
Primer
Products: |  | Browse OriGene genome-wide validated SYBR primer pairs
Browse OriGene validated miRNA SYBR primer pairs
| | | Search SABiosciences RT2 qPCR
Primer Assays in human, mouse, rat CYP2A7P1 | | | Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CYP2A7P1 | | | Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CYP2A7P1 |
Orthologs
for CYP2A7P1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for CYP2A7P1 (if available)
TreeFam Gene Tree for CYP2A7P1 (if available) |
Paralogs
for CYP2A7P1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for CYP2A7P1 gene
CYP2A7P1 for paralogs About GeneDecksing
1 Pseudogenes.org Pseudogene for CYP2A7P1
PGOHUM00000259334
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Genomic Variants
for CYP2A7P1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
| | SABiosciences Cancer Mutation PCR Assays |
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Disorders
/ Diseases
for CYP2A7P1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
CYP2A7P1 for disorders About GeneDecksing
4  diseases for CYP2A7P1: About MalaCardsgiant cell hepatitis hermaphroditism hepatitis neuronitis
Export disorders for CYP2A7P1 gene to outside databases
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Publications
for CYP2A7P1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for CYP2A7P1 gene integrated from 9 sources:
(articles sorted by number of sources associating them with CYP2A7P1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- A genetic polymorphism in coumarin 7-hydroxylation: sequence of the human CYP2A genes and identification of variant CYP2A6 alleles. (PubMed id 7668294)1, 3 Fernandez-Salguero P.... Idle J.R. (1995)
- Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes, including nomenclature recommendations for genes, pseudogenes and alternative-splice variants. (PubMed id 15128046)1 Nelson D.R....Nebert D.W. (2004)
- Organization, structure and evolution of the CYP2 gene cluster on human chromosome 19. (PubMed id 11692077)1 Hoffman S.M....Keeney D.S. (2001)
- Organization and evolution of the cytochrome P450 CYP2A-2B-2F subfamily gene cluster on human chromosome 19. (PubMed id 8587134)1 Hoffman S.M....Mohrenweiser H.W. (1995)
- Identification of a new human CYP2A gene fragment with close linkage to CYP2GP1. (PubMed id 11124222)9 Sheng J....Ding X. (2001)
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External Searches for CYP2A7P1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
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Genome Databases showing CYP2A7P1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
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Other Databases showing CYP2A7P1 gene
(According to HUGE)
About This Section
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Specialized Databases showing CYP2A7P1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for CYP2A7P1 | Pharmacogenomics, SNPs, Pathways |
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About This Section
| Patent Information for CYP2A7P1 gene:
Search GeneIP for patents involving CYP2A7P1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for CYP2A7P1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
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|  | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CYP2A7P1 | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CYP2A7P1 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CYP2A7P1 | | | Search QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CYP2A7P1 | | | Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CYP2A7P1 | | | Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CYP2A7P1 |
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 | | | | |  |  |  | | | | Search ThermoFisher Antibodies for CYP2A7P1 |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat CYP2A7P1 |
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