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Aliases for CYP1B1-AS1 Gene

Subcategory (RNA class) for CYP1B1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for CYP1B1-AS1 Gene

  • CYP1B1 Antisense RNA 1 2 3
  • CYP1B1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 2 Open Reading Frame 58 2
  • C2orf58 3

External Ids for CYP1B1-AS1 Gene

ORGUL Members for CYP1B1-AS1 Gene

Previous HGNC Symbols for CYP1B1-AS1 Gene

  • C2orf58

Previous GeneCards Identifiers for CYP1B1-AS1 Gene

  • GC02P038302

Summaries for CYP1B1-AS1 Gene

GeneCards Summary for CYP1B1-AS1 Gene

CYP1B1-AS1 (CYP1B1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP1B1-AS1 Gene

Genomics for CYP1B1-AS1 Gene

Genomic Location for CYP1B1-AS1 Gene

Start:
38,075,648 bp from pter
End:
38,181,855 bp from pter
Size:
106,208 bases
Orientation:
Plus strand

Genomic View for CYP1B1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CYP1B1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP1B1-AS1 Gene

No data available for Regulatory Elements for CYP1B1-AS1 Gene

Proteins for CYP1B1-AS1 Gene

Post-translational modifications for CYP1B1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP1B1-AS1 Gene

Domains for CYP1B1-AS1 Gene

Gene Families for CYP1B1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CYP1B1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP1B1-AS1 Gene

Function for CYP1B1-AS1 Gene

Animal Model Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CYP1B1-AS1
    • Block miRNA regulation of CYP1B1-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for CYP1B1-AS1

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CYP1B1-AS1 Gene

    Localization for CYP1B1-AS1 Gene

    No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYP1B1-AS1 Gene

    Pathways for CYP1B1-AS1 Gene

    SuperPathways for CYP1B1-AS1 Gene

    No Data Available

    Interacting Proteins for CYP1B1-AS1 Gene

    Gene Ontology (GO) - Biological Process for CYP1B1-AS1 Gene

    None

    No data available for Pathways by source for CYP1B1-AS1 Gene

    Transcripts for CYP1B1-AS1 Gene

    mRNA/cDNA for CYP1B1-AS1 Gene

    (2) Additional mRNA sequences :
    (6) Selected AceView cDNA sequences:
    (1) REFSEQ mRNAs :
    (15) Ensembl transcripts including schematic representations, and UCSC links where relevant :

    Unigene Clusters for CYP1B1-AS1 Gene

    CYP1B1 antisense RNA 1:
    Representative Sequences:

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate CYP1B1-AS1
      • Block miRNA regulation of CYP1B1-AS1 using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for CYP1B1-AS1

      Primer Products

      • OriGene qSTAR qPCR primer pairs in human,mouse,rat for CYP1B1-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for CYP1B1-AS1 Gene

      No ASD Table

      Relevant External Links for CYP1B1-AS1 Gene

      GeneLoc Exon Structure for
      CYP1B1-AS1
      ECgene alternative splicing isoforms for
      CYP1B1-AS1

      Expression for CYP1B1-AS1 Gene

      mRNA expression in normal human tissues for CYP1B1-AS1 Gene

      mRNA differential expression in normal tissues according to GTEx for CYP1B1-AS1 Gene

      This gene is overexpressed in Whole Blood (9.2).

      SOURCE GeneReport for Unigene cluster for CYP1B1-AS1 Gene Hs.353894

      genes like me logo Genes that share expressions with CYP1B1-AS1: view

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for CYP1B1-AS1 Gene

      Orthologs for CYP1B1-AS1 Gene

      Evolution for CYP1B1-AS1 Gene

      ENSEMBL:
      Gene Tree for CYP1B1-AS1 (if available)
      TreeFam:
      Gene Tree for CYP1B1-AS1 (if available)

      No data available for Orthologs for CYP1B1-AS1 Gene

      Paralogs for CYP1B1-AS1 Gene

      No data available for Paralogs for CYP1B1-AS1 Gene

      Variants for CYP1B1-AS1 Gene

      Sequence variations from dbSNP and Humsavar for CYP1B1-AS1 Gene

      SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
      rs68352 -- 38,180,824(+) ATCAT(C/T)AGACT nc-transcript-variant
      rs170811 -- 38,168,099(-) ACATG(A/T)CTATA intron-variant
      rs170812 -- 38,164,629(-) TACAC(A/T)AACCA intron-variant
      rs170818 -- 38,147,425(-) ctgcc(A/G)aagcg intron-variant
      rs179792 -- 38,162,070(-) ACGGG(G/T)TTTCA intron-variant

      Structural Variations from Database of Genomic Variants (DGV) for CYP1B1-AS1 Gene

      Variant ID Type Subtype PubMed ID
      esv2659660 CNV Deletion 23128226
      nsv9646 CNV Loss 18304495
      esv2245622 CNV Deletion 18987734
      esv21528 CNV Loss 19812545
      esv2719944 CNV Deletion 23290073
      nsv2689 CNV Insertion 18451855

      Relevant External Links for CYP1B1-AS1 Gene

      HapMap Linkage Disequilibrium report
      CYP1B1-AS1

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CYP1B1-AS1 Gene

      Disorders for CYP1B1-AS1 Gene

      No disorders were found for CYP1B1-AS1 Gene.

      No data available for UniProtKB/Swiss-Prot for CYP1B1-AS1 Gene

      Publications for CYP1B1-AS1 Gene

      1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3

      Products for CYP1B1-AS1 Gene

      • QIAGEN qRT-PCR Assays for microRNAs that regulate CYP1B1-AS1
        • QuantiTect SYBR Green Assays in human,mouse,rat
        • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
        • QuantiFast Probe-based Assays in human,mouse,rat
        • Predesigned siRNA for gene silencing in human,mouse,rat for CYP1B1-AS1
        • Block miRNA regulation of CYP1B1-AS1 using miScript Target Protectors

        Sources for CYP1B1-AS1 Gene

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