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Aliases for CYP1B1-AS1 Gene

Subcategory (RNA class) for CYP1B1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for CYP1B1-AS1 Gene

  • CYP1B1 Antisense RNA 1 2 3
  • CYP1B1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 2 Open Reading Frame 58 2
  • C2orf58 3

External Ids for CYP1B1-AS1 Gene

ORGUL Members for CYP1B1-AS1 Gene

Previous HGNC Symbols for CYP1B1-AS1 Gene

  • C2orf58

Previous GeneCards Identifiers for CYP1B1-AS1 Gene

  • GC02P038302

Summaries for CYP1B1-AS1 Gene

GeneCards Summary for CYP1B1-AS1 Gene

CYP1B1-AS1 (CYP1B1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP1B1-AS1 Gene

Genomics for CYP1B1-AS1 Gene

Genomic Location for CYP1B1-AS1 Gene

Start:
38,075,648 bp from pter
End:
38,181,855 bp from pter
Size:
106,208 bases
Orientation:
Plus strand

Genomic View for CYP1B1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CYP1B1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP1B1-AS1 Gene

No data available for Regulatory Elements for CYP1B1-AS1 Gene

Proteins for CYP1B1-AS1 Gene

Post-translational modifications for CYP1B1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP1B1-AS1 Gene

Domains for CYP1B1-AS1 Gene

Gene Families for CYP1B1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CYP1B1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP1B1-AS1 Gene

Function for CYP1B1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CYP1B1-AS1 Gene

Localization for CYP1B1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYP1B1-AS1 Gene

Pathways for CYP1B1-AS1 Gene

SuperPathways for CYP1B1-AS1 Gene

No Data Available

Interacting Proteins for CYP1B1-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP1B1-AS1 Gene

None

No data available for Pathways by source for CYP1B1-AS1 Gene

Transcripts for CYP1B1-AS1 Gene

mRNA/cDNA for CYP1B1-AS1 Gene

(2) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(15) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CYP1B1-AS1 Gene

CYP1B1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CYP1B1-AS1 Gene

No ASD Table

Relevant External Links for CYP1B1-AS1 Gene

GeneLoc Exon Structure for
CYP1B1-AS1
ECgene alternative splicing isoforms for
CYP1B1-AS1

Expression for CYP1B1-AS1 Gene

mRNA expression in normal human tissues for CYP1B1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CYP1B1-AS1 Gene

This gene is overexpressed in Whole Blood (9.2).

SOURCE GeneReport for Unigene cluster for CYP1B1-AS1 Gene Hs.353894

genes like me logo Genes that share expressions with CYP1B1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for CYP1B1-AS1 Gene

Orthologs for CYP1B1-AS1 Gene

Evolution for CYP1B1-AS1 Gene

ENSEMBL:
Gene Tree for CYP1B1-AS1 (if available)
TreeFam:
Gene Tree for CYP1B1-AS1 (if available)

No data available for Orthologs for CYP1B1-AS1 Gene

Paralogs for CYP1B1-AS1 Gene

No data available for Paralogs for CYP1B1-AS1 Gene

Variants for CYP1B1-AS1 Gene

Sequence variations from dbSNP and Humsavar for CYP1B1-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs68352 -- 38,180,824(+) ATCAT(C/T)AGACT nc-transcript-variant
rs170811 -- 38,168,099(-) ACATG(A/T)CTATA intron-variant
rs170812 -- 38,164,629(-) TACAC(A/T)AACCA intron-variant
rs170818 -- 38,147,425(-) ctgcc(A/G)aagcg intron-variant
rs179792 -- 38,162,070(-) ACGGG(G/T)TTTCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CYP1B1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2659660 CNV Deletion 23128226
nsv9646 CNV Loss 18304495
esv2245622 CNV Deletion 18987734
esv21528 CNV Loss 19812545
esv2719944 CNV Deletion 23290073
nsv2689 CNV Insertion 18451855

Relevant External Links for CYP1B1-AS1 Gene

HapMap Linkage Disequilibrium report
CYP1B1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CYP1B1-AS1 Gene

Disorders for CYP1B1-AS1 Gene

No disorders were found for CYP1B1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for CYP1B1-AS1 Gene

Publications for CYP1B1-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3

Products for CYP1B1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CYP1B1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CYP1B1-AS1
    • Block miRNA regulation of CYP1B1-AS1 using miScript Target Protectors

    Sources for CYP1B1-AS1 Gene

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