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Aliases for CYP17A1-AS1 Gene

Subcategory (RNA class) for CYP17A1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CYP17A1-AS1 Gene

  • CYP17A1 Antisense RNA 1 2 3 5
  • Cytochrome P450, Family 17, Subfamily A, Polypeptide 1 Opposite Strand 2 3
  • CYP17A1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • BA753C18.3 3
  • CYP17A1OS 3

External Ids for CYP17A1-AS1 Gene

Previous HGNC Symbols for CYP17A1-AS1 Gene

  • CYP17A1OS

Previous GeneCards Identifiers for CYP17A1-AS1 Gene

  • GC10U901552
  • GC10P104593

Summaries for CYP17A1-AS1 Gene

GeneCards Summary for CYP17A1-AS1 Gene

CYP17A1-AS1 (CYP17A1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP17A1-AS1 Gene

Genomics for CYP17A1-AS1 Gene

Regulatory Elements for CYP17A1-AS1 Gene

Enhancers for CYP17A1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F102772 1.1 FANTOM5 ENCODE 6.1 -54.1 -54069 11.7 PKNOX1 ZFP64 SIN3A YY1 ZNF121 GLIS2 FOS ZNF263 ZNF202 REST PDCD11 SFXN2 TAF5 ARL3 PPRC1 GBF1 LDB1 AS3MT INA BORCS7
GH10F102449 0.6 ENCODE 5.2 -379.5 -379487 8.0 ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 PDCD11 TAF5 GBF1 RPEL1 SFXN2 PPRC1 ARL3 RPARP-AS1 INA CALHM2
GH10F102833 1.4 Ensembl ENCODE 0.8 +1.9 1940 1.6 CTCF PKNOX1 KLF17 ARID4B ZNF2 RAD21 ZNF324 CBX5 ZBTB48 PATZ1 AS3MT NT5C2 CYP17A1 CYP17A1-AS1
GH10F102811 1.3 FANTOM5 Ensembl ENCODE 0.3 -16.8 -16827 8.4 PKNOX1 ATF1 MLX ARID4B FEZF1 DMAP1 ZNF48 YY1 SLC30A9 SP5 AS3MT BORCS7 CYP17A1 PFN1P11 PTGES3P4 RPEL1 ARL3 SFXN2 CNNM2 WBP1L
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CYP17A1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYP17A1-AS1 Gene

Chromosome:
10
Start:
102,832,667 bp from pter
End:
102,834,516 bp from pter
Size:
1,850 bases
Orientation:
Plus strand

Genomic View for CYP17A1-AS1 Gene

Genes around CYP17A1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP17A1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP17A1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP17A1-AS1 Gene

Proteins for CYP17A1-AS1 Gene

Post-translational modifications for CYP17A1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP17A1-AS1 Gene

Domains & Families for CYP17A1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP17A1-AS1 Gene

Function for CYP17A1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP17A1-AS1 Gene

Localization for CYP17A1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYP17A1-AS1 Gene

Pathways & Interactions for CYP17A1-AS1 Gene

SuperPathways for CYP17A1-AS1 Gene

No Data Available

Interacting Proteins for CYP17A1-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP17A1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP17A1-AS1 Gene

Transcripts for CYP17A1-AS1 Gene

mRNA/cDNA for CYP17A1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYP17A1-AS1 Gene

No ASD Table

Relevant External Links for CYP17A1-AS1 Gene

GeneLoc Exon Structure for
CYP17A1-AS1
ECgene alternative splicing isoforms for
CYP17A1-AS1

Expression for CYP17A1-AS1 Gene

mRNA expression in normal human tissues for CYP17A1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CYP17A1-AS1 Gene

This gene is overexpressed in Adrenal Gland (x23.6).
genes like me logo Genes that share expression patterns with CYP17A1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYP17A1-AS1 Gene

Orthologs for CYP17A1-AS1 Gene

Evolution for CYP17A1-AS1 Gene

ENSEMBL:
Gene Tree for CYP17A1-AS1 (if available)
TreeFam:
Gene Tree for CYP17A1-AS1 (if available)

No data available for Orthologs for CYP17A1-AS1 Gene

Paralogs for CYP17A1-AS1 Gene

No data available for Paralogs for CYP17A1-AS1 Gene

Variants for CYP17A1-AS1 Gene

Sequence variations from dbSNP and Humsavar for CYP17A1-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs104894136 Pathogenic 102,834,074(-) AAATA(C/T)GAAAT intron-variant, reference, stop-gained
rs104894137 Pathogenic 102,832,626(-) GCACA(A/C)CAACT upstream-variant-2KB, reference, missense
rs104894139 Pathogenic 102,832,577(-) CATCC(A/G)AGAGG upstream-variant-2KB, reference, missense
rs104894142 Pathogenic 102,832,566(-) TGCTT(C/T)GCCTC upstream-variant-2KB, reference, missense
rs104894143 Pathogenic 102,831,535(-) AGGAG(C/T)GGCAC upstream-variant-2KB, reference, missense

Relevant External Links for CYP17A1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP17A1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYP17A1-AS1 Gene

Disorders for CYP17A1-AS1 Gene

No disorders were found for CYP17A1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYP17A1-AS1 Gene

Publications for CYP17A1-AS1 Gene

  1. Genome-wide association study of blood pressure and hypertension. (PMID: 19430479) Levy D. … van Duijn C.M. (Nat. Genet. 2009) 3 64
  2. Genome-wide association study reveals genetic risk underlying Parkinson's disease. (PMID: 19915575) SimA^n-SA!nchez J. … Gasser T. (Nat. Genet. 2009) 3 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for CYP17A1-AS1 Gene

Sources for CYP17A1-AS1 Gene

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