Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CYCSP55 Gene

Aliases for CYCSP55 Gene

  • Cytochrome C, Somatic Pseudogene 55 2 3 5
  • Cytochrome C, Somatic-Like 1 (Pseudogene) 2 3
  • Cytochrome C, Somatic-Like 1 2
  • BA513I15.3 3
  • CYCSL1 3
  • HCP15 3
  • HS11 3

External Ids for CYCSP55 Gene

Previous HGNC Symbols for CYCSP55 Gene

  • CYCSL1

Previous GeneCards Identifiers for CYCSP55 Gene

  • GC06P034191
  • GC06P034193
  • GC06P034444
  • GC06P035767
  • GC06P036297
  • GC06P037283
  • GC06P034919
  • GC06P035502
  • GC06P037623
  • GC06P038312

Summaries for CYCSP55 Gene

GeneCards Summary for CYCSP55 Gene

CYCSP55 (Cytochrome C, Somatic Pseudogene 55) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP55 Gene

Genomics for CYCSP55 Gene

Regulatory Elements for CYCSP55 Gene

Enhancers for CYCSP55 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F033414 1.5 FANTOM5 ENCODE 16.2 -801.7 -801663 6.4 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 RPL35AP4 HTATSF1P1 MIR219A1 KRT18P9 CYCSP55 LOC102725019 RING1 ENSG00000233183 MIR5004 CUTA
GH06F034791 1.4 FANTOM5 ENCODE 16.2 +573.0 572980 2.7 HDGF ARNT ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 SP3 UHRF1BP1 RPS10P13 CYCSP55 KRT18P9 ENSG00000233183 ENSG00000272374 ENSG00000206717
GH06F033618 1.4 FANTOM5 ENCODE 16.2 -597.3 -597288 6.5 HDGF PKNOX1 MLX CREB3L1 WRNIP1 ZFP64 SIN3A ARID4B DMAP1 ZNF2 RPL35AP4 HTATSF1P1 MIR219A1 CYCSP55 KRT18P9 LOC102725019 ITPR3 ENSG00000233183 RING1 IP6K3
GH06F033247 1.4 FANTOM5 ENCODE 16.2 -969.8 -969795 3.3 HDGF PKNOX1 ARNT CREB3L1 MLX SIN3A ARID4B DMAP1 ZNF2 YY1 DAXX HTATSF1P1 MIR219A1 RPL35AP4 LOC102725019 KRT18P9 CYCSP55 ENSG00000233183 TAPBP HCG25
GH06F034382 1.3 Ensembl ENCODE 16.2 +165.7 165741 4.6 PKNOX1 FEZF1 ZNF2 GTF3C2 ZNF121 FOS ZNF263 TSHZ1 ZNF488 NFIL3 RPS10 CYCSP55 KRT18P9 RPS10P13 RPL35AP4 LEMD2 ITPR3 ENSG00000233183 ENSG00000272374 NUDT3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP55 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP55 Gene

Chromosome:
6
Start:
34,219,372 bp from pter
End:
34,220,937 bp from pter
Size:
1,566 bases
Orientation:
Plus strand

Genomic View for CYCSP55 Gene

Genes around CYCSP55 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP55 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP55 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP55 Gene

Proteins for CYCSP55 Gene

Post-translational modifications for CYCSP55 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP55 Gene

Domains & Families for CYCSP55 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP55 Gene

Function for CYCSP55 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP55 Gene

Localization for CYCSP55 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP55 Gene

Pathways & Interactions for CYCSP55 Gene

SuperPathways for CYCSP55 Gene

No Data Available

Interacting Proteins for CYCSP55 Gene

Gene Ontology (GO) - Biological Process for CYCSP55 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP55 Gene

Transcripts for CYCSP55 Gene

mRNA/cDNA for CYCSP55 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP55 Gene

No ASD Table

Relevant External Links for CYCSP55 Gene

GeneLoc Exon Structure for
CYCSP55
ECgene alternative splicing isoforms for
CYCSP55

Expression for CYCSP55 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP55 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP55 Gene:

CYCSP55
genes like me logo Genes that share expression patterns with CYCSP55: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYCSP55 Gene

Orthologs for CYCSP55 Gene

Evolution for CYCSP55 Gene

ENSEMBL:
Gene Tree for CYCSP55 (if available)
TreeFam:
Gene Tree for CYCSP55 (if available)

No data available for Orthologs for CYCSP55 Gene

Paralogs for CYCSP55 Gene

No data available for Paralogs for CYCSP55 Gene

Variants for CYCSP55 Gene

Relevant External Links for CYCSP55 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP55

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP55 Gene

Disorders for CYCSP55 Gene

No disorders were found for CYCSP55 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP55 Gene

Publications for CYCSP55 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64
  2. The human somatic cytochrome c gene: two classes of processed pseudogenes demarcate a period of rapid molecular evolution. (PMID: 2849112) Evans M.J. … Scarpulla R.C. (Proc. Natl. Acad. Sci. U.S.A. 1988) 3 64

Products for CYCSP55 Gene

Sources for CYCSP55 Gene

Content
Loading form....