Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CYCSP55 Gene

Aliases for CYCSP55 Gene

  • Cytochrome C, Somatic Pseudogene 55 2 3 5
  • Cytochrome C, Somatic-Like 1 (Pseudogene) 2 3
  • Cytochrome C, Somatic-Like 1 2
  • BA513I15.3 3
  • CYCSL1 3
  • HCP15 3
  • HS11 3

External Ids for CYCSP55 Gene

Previous HGNC Symbols for CYCSP55 Gene

  • CYCSL1

Previous GeneCards Identifiers for CYCSP55 Gene

  • GC06P034191
  • GC06P034193
  • GC06P034444
  • GC06P035767
  • GC06P036297
  • GC06P037283
  • GC06P034919
  • GC06P035502
  • GC06P037623
  • GC06P038312
  • GC06P038952

Summaries for CYCSP55 Gene

GeneCards Summary for CYCSP55 Gene

CYCSP55 (Cytochrome C, Somatic Pseudogene 55) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP55 Gene

Genomics for CYCSP55 Gene

Regulatory Elements for CYCSP55 Gene

Enhancers for CYCSP55 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G034223 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.1 5066 2.7 HDGF ARNT ARID4B SIN3A YBX1 DMAP1 ZNF2 ZBTB7B ZNF766 ZNF207 RPS10 ITPR3 LEMD2 DAXX RGL2 WDR46 B3GALT4 VPS52 HCG25 NUDT3
GH06G034226 1.6 Ensembl ENCODE dbSUPER 0.4 +8.9 8871 4.1 HDGF CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 FOS WDR46 VPS52 DAXX RPS10 LEMD2 RPL35P2 RGL2 SMIM29 PIR48064 CYCSP55
GH06G034200 1.1 Ensembl ENCODE 0.4 -18.7 -18674 0.7 BCOR HDGF ESRRA ATF1 CBX3 NFRKB ZMYM3 NFXL1 PYGO2 YY1 MLN KRT18P9 CYCSP55
GH06G034195 1.3 Ensembl ENCODE 0.3 -22.8 -22841 1.5 HDGF CREB3L1 AGO1 WRNIP1 SIN3A ARID4B DMAP1 ZNF2 ZNF143 ZNF263 LEMD2 RPS10 KRT18P9 CYCSP55
GH06G034230 0.9 ENCODE dbSUPER 0.4 +12.0 12001 0.9 BCOR SCRT1 ZMYM3 ZNF623 SCRT2 KDM1A ZBTB33 SPI1 SMIM29 PIR48064 CYCSP55
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP55 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP55 Gene

Chromosome:
6
Start:
34,219,372 bp from pter
End:
34,220,937 bp from pter
Size:
1,566 bases
Orientation:
Plus strand

Genomic View for CYCSP55 Gene

Genes around CYCSP55 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP55 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP55 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP55 Gene

Proteins for CYCSP55 Gene

Post-translational modifications for CYCSP55 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP55 Gene

Domains & Families for CYCSP55 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP55 Gene

Function for CYCSP55 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP55 Gene

Localization for CYCSP55 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP55 Gene

Pathways & Interactions for CYCSP55 Gene

SuperPathways for CYCSP55 Gene

No Data Available

Interacting Proteins for CYCSP55 Gene

Gene Ontology (GO) - Biological Process for CYCSP55 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP55 Gene

Drugs & Compounds for CYCSP55 Gene

No Compound Related Data Available

Transcripts for CYCSP55 Gene

mRNA/cDNA for CYCSP55 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP55 Gene

No ASD Table

Relevant External Links for CYCSP55 Gene

GeneLoc Exon Structure for
CYCSP55
ECgene alternative splicing isoforms for
CYCSP55

Expression for CYCSP55 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP55 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP55 Gene:

CYCSP55
genes like me logo Genes that share expression patterns with CYCSP55: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP55 Gene

Orthologs for CYCSP55 Gene

Evolution for CYCSP55 Gene

ENSEMBL:
Gene Tree for CYCSP55 (if available)
TreeFam:
Gene Tree for CYCSP55 (if available)

No data available for Orthologs for CYCSP55 Gene

Paralogs for CYCSP55 Gene

No data available for Paralogs for CYCSP55 Gene

Variants for CYCSP55 Gene

Relevant External Links for CYCSP55 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP55

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP55 Gene

Disorders for CYCSP55 Gene

No disorders were found for CYCSP55 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP55 Gene

Publications for CYCSP55 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64
  2. The human somatic cytochrome c gene: two classes of processed pseudogenes demarcate a period of rapid molecular evolution. (PMID: 2849112) Evans M.J. … Scarpulla R.C. (Proc. Natl. Acad. Sci. U.S.A. 1988) 3 64

Products for CYCSP55 Gene

Sources for CYCSP55 Gene

Content
Loading form....