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Aliases for CYCSP52 Gene

Subcategory (RNA class) for CYCSP52 Gene

antisense

Aliases for CYCSP52 Gene

  • Cytochrome C, Somatic Pseudogene 52 2 3
  • Somatic Cytochrome C (HC6) Processed Pseudogene 3
  • HCP2 3
  • HC6 3

External Ids for CYCSP52 Gene

ORGUL Members for CYCSP52 Gene

Previous GeneCards Identifiers for CYCSP52 Gene

  • GC01P153912
  • GC01P155364
  • GC01P128456

Summaries for CYCSP52 Gene

GeneCards Summary for CYCSP52 Gene

CYCSP52 (Cytochrome C, Somatic Pseudogene 52) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP52 Gene

Genomics for CYCSP52 Gene

Regulatory Elements for CYCSP52 Gene

Genomic Location for CYCSP52 Gene

Start:
157,128,362 bp from pter
End:
157,128,671 bp from pter
Size:
310 bases
Orientation:
Plus strand

Genomic View for CYCSP52 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CYCSP52 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP52 Gene

Proteins for CYCSP52 Gene

Post-translational modifications for CYCSP52 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP52 Gene

Domains for CYCSP52 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP52 Gene

Function for CYCSP52 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CYCSP52 Gene

Localization for CYCSP52 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP52 Gene

Pathways for CYCSP52 Gene

SuperPathways for CYCSP52 Gene

No Data Available

Interacting Proteins for CYCSP52 Gene

Gene Ontology (GO) - Biological Process for CYCSP52 Gene

None

No data available for Pathways by source for CYCSP52 Gene

Transcripts for CYCSP52 Gene

mRNA/cDNA for CYCSP52 Gene

(2) Selected AceView cDNA sequences:
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CYCSP52 Gene

Cytochrome c, somatic pseudogene 52:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CYCSP52

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP52 Gene

No ASD Table

Relevant External Links for CYCSP52 Gene

GeneLoc Exon Structure for
CYCSP52
ECgene alternative splicing isoforms for
CYCSP52

Expression for CYCSP52 Gene

mRNA expression in normal human tissues for CYCSP52 Gene

SOURCE GeneReport for Unigene cluster for CYCSP52 Gene Hs.491808

genes like me logo Genes that share expressions with CYCSP52: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for CYCSP52 Gene

Orthologs for CYCSP52 Gene

Evolution for CYCSP52 Gene

ENSEMBL:
Gene Tree for CYCSP52 (if available)
TreeFam:
Gene Tree for CYCSP52 (if available)

No data available for Orthologs for CYCSP52 Gene

Paralogs for CYCSP52 Gene

No data available for Paralogs for CYCSP52 Gene

Variants for CYCSP52 Gene

Structural Variations from Database of Genomic Variants (DGV) for CYCSP52 Gene

Variant ID Type Subtype PubMed ID
nsv3121 CNV Loss 18451855

Relevant External Links for CYCSP52 Gene

HapMap Linkage Disequilibrium report
CYCSP52

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for CYCSP52 Gene

Disorders for CYCSP52 Gene

Relevant External Links for CYCSP52

Genetic Association Database (GAD)
CYCSP52
genes like me logo Genes that share disorders with CYCSP52: view

No data available for UniProtKB/Swiss-Prot for CYCSP52 Gene

Publications for CYCSP52 Gene

  1. The human somatic cytochrome c gene: two classes of processed pseudogenes demarcate a period of rapid molecular evolution. (PMID: 2849112) Evans M.J. … Scarpulla R.C. (Proc. Natl. Acad. Sci. U.S.A. 1988) 2 3
  2. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 48
  5. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D. … Mitchell G.F. (BMC Med. Genet. 2007) 48

Products for CYCSP52 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CYCSP52
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CYCSP52
    • Block miRNA regulation of CYCSP52 using miScript Target Protectors

    Sources for CYCSP52 Gene

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