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Aliases for CYCSP51 Gene

Subcategory (RNA class) for CYCSP51 Gene

lncRNA

Aliases for CYCSP51 Gene

  • Cytochrome C, Somatic Pseudogene 51 2 3 5
  • HCP1 3

External Ids for CYCSP51 Gene

ORGUL Members for CYCSP51 Gene

Previous GeneCards Identifiers for CYCSP51 Gene

  • GC01P147691
  • GC01P149142
  • GC01P150877

Summaries for CYCSP51 Gene

GeneCards Summary for CYCSP51 Gene

CYCSP51 (Cytochrome C, Somatic Pseudogene 51) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP51 Gene

Genomics for CYCSP51 Gene

Regulatory Elements for CYCSP51 Gene

Enhancers for CYCSP51 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F150320 1.6 FANTOM5 ENCODE 16.2 -582.1 -582141 2.4 HDGF PKNOX1 ARNT MLX CREB3L1 WRNIP1 ARID4B SIN3A YBX1 DMAP1 GABPB2 PRPF3 ADAMTSL4 SETDB1 CYCSP51 MRPS21 MCL1 BOLA1 LYSMD1 UBE2D3P3
GH01F150874 1.2 ENCODE 16.4 -28.0 -27996 3.7 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 HORMAD1 SETDB1 GOLPH3L CYCSP51 PRPF3 SF3B4 ARNT UBE2D3P3 MRPL9 RPS10P6
GH01F150557 1.2 ENCODE 16.2 -334.6 -334592 23.1 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC HORMAD1 SETDB1 GOLPH3L SF3B4 CTSK PRPF3 UBE2D3P3 CYCSP51 VPS45 GABPB2
GH01F150514 1.2 ENCODE 16.2 -388.1 -388082 2.7 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC SETDB1 ADAMTSL4 GOLPH3L GABPB2 MRPS21 CYCSP51 LOC100289061 ADAMTSL4-AS1 HIST2H2AB PRPF3
GH01F150262 1.2 ENCODE 16.2 -641.0 -641023 1.7 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 CYCSP51 SETDB1 ADAMTSL4 HIST2H2AB PRPF3 SF3B4 CTSK UBE2D3P3 MCL1 HORMAD1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP51 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP51 Gene

Chromosome:
1
Start:
150,903,896 bp from pter
End:
150,904,213 bp from pter
Size:
318 bases
Orientation:
Plus strand

Genomic View for CYCSP51 Gene

Genes around CYCSP51 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP51 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP51 Gene

Proteins for CYCSP51 Gene

Post-translational modifications for CYCSP51 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP51 Gene

Domains & Families for CYCSP51 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP51 Gene

Function for CYCSP51 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP51 Gene

Localization for CYCSP51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP51 Gene

Pathways & Interactions for CYCSP51 Gene

SuperPathways for CYCSP51 Gene

No Data Available

Interacting Proteins for CYCSP51 Gene

Gene Ontology (GO) - Biological Process for CYCSP51 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP51 Gene

Transcripts for CYCSP51 Gene

mRNA/cDNA for CYCSP51 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP51 Gene

No ASD Table

Relevant External Links for CYCSP51 Gene

GeneLoc Exon Structure for
CYCSP51
ECgene alternative splicing isoforms for
CYCSP51

Expression for CYCSP51 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP51 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP51 Gene:

CYCSP51
genes like me logo Genes that share expression patterns with CYCSP51: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYCSP51 Gene

Orthologs for CYCSP51 Gene

Evolution for CYCSP51 Gene

ENSEMBL:
Gene Tree for CYCSP51 (if available)
TreeFam:
Gene Tree for CYCSP51 (if available)

No data available for Orthologs for CYCSP51 Gene

Paralogs for CYCSP51 Gene

No data available for Paralogs for CYCSP51 Gene

Variants for CYCSP51 Gene

Relevant External Links for CYCSP51 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP51 Gene

Disorders for CYCSP51 Gene

No disorders were found for CYCSP51 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP51 Gene

Publications for CYCSP51 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64

Products for CYCSP51 Gene

Sources for CYCSP51 Gene

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