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Aliases for CYCSP51 Gene

Subcategory (RNA class) for CYCSP51 Gene

lncRNA

Aliases for CYCSP51 Gene

  • Cytochrome C, Somatic Pseudogene 51 2 3 5
  • HCP1 3

External Ids for CYCSP51 Gene

ORGUL Members for CYCSP51 Gene

Previous GeneCards Identifiers for CYCSP51 Gene

  • GC01P147691
  • GC01P149142
  • GC01P150877

Summaries for CYCSP51 Gene

GeneCards Summary for CYCSP51 Gene

CYCSP51 (Cytochrome C, Somatic Pseudogene 51) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CYCSP51 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP51 Gene

Genomics for CYCSP51 Gene

Regulatory Elements for CYCSP51 Gene

Enhancers for CYCSP51 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H150557 1.7 Ensembl ENCODE dbSUPER 14.6 -334.6 -334592 23.1 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A SSRP1 ZNF610 SETDB1 PIP5K1A HORMAD1 GOLPH3L PI4KB ARNT GABPB2 RPRD2 SF3B4 PRPF3
GH01H150320 1.5 FANTOM5 ENCODE 14.6 -582.1 -582141 2.4 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 YBX1 ZNF2 ZBTB7B PRPF3 GABPB2 SETDB1 PIP5K1A UBE2D3P3 RPRD2 GOLPH3L SF3B4 ARNT ZNF687
GH01H150232 1.4 ENCODE dbSUPER 14.6 -668.8 -668760 4.8 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZNF610 GLIS1 NBN SETDB1 PRPF3 GABPB2 PIP5K1A SF3B4 RPRD2 ARNT UBE2D3P3 GOLPH3L HIST2H2BD
GH01H150874 1.2 ENCODE 14.9 -28.0 -27996 3.7 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 PI4KB MRPL9 HORMAD1 RPRD2 PIP5K1A ARNT POGZ LYSMD1 SETDB1 GOLPH3L
GH01H150514 1.1 ENCODE 14.6 -388.1 -388082 2.7 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 ADAMTSL4 MRPS21 PIP5K1A SETDB1 CYCSP51 C1orf56 LOC100289061 ADAMTSL4-AS1 CA14 SF3B4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP51 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP51 Gene

Genomic Locations for CYCSP51 Gene
chr1:150,903,896-150,904,213
(GRCh38/hg38)
Size:
318 bases
Orientation:
Plus strand
chr1:150,876,372-150,876,689
(GRCh37/hg19)

Genomic View for CYCSP51 Gene

Genes around CYCSP51 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP51 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP51 Gene

Proteins for CYCSP51 Gene

Post-translational modifications for CYCSP51 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP51 Gene

Domains & Families for CYCSP51 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP51 Gene

Function for CYCSP51 Gene

Phenotypes From GWAS Catalog for CYCSP51 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP51 Gene

Localization for CYCSP51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP51 Gene

Pathways & Interactions for CYCSP51 Gene

SuperPathways for CYCSP51 Gene

No Data Available

Interacting Proteins for CYCSP51 Gene

Gene Ontology (GO) - Biological Process for CYCSP51 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP51 Gene

Drugs & Compounds for CYCSP51 Gene

No Compound Related Data Available

Transcripts for CYCSP51 Gene

mRNA/cDNA for CYCSP51 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP51 Gene

No ASD Table

Relevant External Links for CYCSP51 Gene

GeneLoc Exon Structure for
CYCSP51
ECgene alternative splicing isoforms for
CYCSP51

Expression for CYCSP51 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP51 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP51 Gene:

CYCSP51
genes like me logo Genes that share expression patterns with CYCSP51: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP51 Gene

Orthologs for CYCSP51 Gene

Evolution for CYCSP51 Gene

ENSEMBL:
Gene Tree for CYCSP51 (if available)
TreeFam:
Gene Tree for CYCSP51 (if available)

No data available for Orthologs for CYCSP51 Gene

Paralogs for CYCSP51 Gene

No data available for Paralogs for CYCSP51 Gene

Variants for CYCSP51 Gene

Relevant External Links for CYCSP51 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP51 Gene

Disorders for CYCSP51 Gene

No disorders were found for CYCSP51 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP51 Gene

Publications for CYCSP51 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 60

Products for CYCSP51 Gene

Sources for CYCSP51 Gene

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