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Aliases for CYCSP45 Gene

Subcategory (RNA class) for CYCSP45 Gene

lncRNA

Aliases for CYCSP45 Gene

  • Cytochrome C, Somatic Pseudogene 45 2 3 5
  • HCP45 3

External Ids for CYCSP45 Gene

ORGUL Members for CYCSP45 Gene

Previous GeneCards Identifiers for CYCSP45 Gene

  • GC0XP152628
  • GC0XP152760
  • GC0XP153107

Summaries for CYCSP45 Gene

GeneCards Summary for CYCSP45 Gene

CYCSP45 (Cytochrome C, Somatic Pseudogene 45) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP45 Gene

Genomics for CYCSP45 Gene

Regulatory Elements for CYCSP45 Gene

Enhancers for CYCSP45 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG153844 0.5 ENCODE 0.7 +4.4 4429 1.8 ZNF316 PBX2 MAFG EMSY MAFK IDH3G SSR4 SRPK3 PLXNB3 L1CAM BCAP31 ABCD1 FAM3A CYCSP45 GC0XM153869
GH0XG153854 0.4 ENCODE 0.4 +13.6 13610 0.2 CTCF HLF L1CAM PDZD4 AVPR2 SSR4 IDH3G SRPK3 PLXNB3 BCAP31 ABCD1 CYCSP45
GH0XG153847 0.2 ENCODE 0.4 +7.1 7111 1.1 L1CAM CYCSP45 GC0XM153869
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP45 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP45 Gene

Chromosome:
X
Start:
153,841,251 bp from pter
End:
153,841,565 bp from pter
Size:
315 bases
Orientation:
Plus strand

Genomic View for CYCSP45 Gene

Genes around CYCSP45 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP45 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP45 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP45 Gene

Proteins for CYCSP45 Gene

Post-translational modifications for CYCSP45 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP45 Gene

Domains & Families for CYCSP45 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP45 Gene

Function for CYCSP45 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP45 Gene

Localization for CYCSP45 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP45 Gene

Pathways & Interactions for CYCSP45 Gene

SuperPathways for CYCSP45 Gene

No Data Available

Interacting Proteins for CYCSP45 Gene

Gene Ontology (GO) - Biological Process for CYCSP45 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP45 Gene

Drugs & Compounds for CYCSP45 Gene

No Compound Related Data Available

Transcripts for CYCSP45 Gene

mRNA/cDNA for CYCSP45 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP45 Gene

No ASD Table

Relevant External Links for CYCSP45 Gene

GeneLoc Exon Structure for
CYCSP45
ECgene alternative splicing isoforms for
CYCSP45

Expression for CYCSP45 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP45 Gene

mRNA differential expression in normal tissues according to GTEx for CYCSP45 Gene

This gene is overexpressed in Heart - Left Ventricle (x10.6), Brain - Cerebellar Hemisphere (x6.9), and Brain - Cerebellum (x6.2).

NURSA nuclear receptor signaling pathways regulating expression of CYCSP45 Gene:

CYCSP45
genes like me logo Genes that share expression patterns with CYCSP45: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP45 Gene

Orthologs for CYCSP45 Gene

Evolution for CYCSP45 Gene

ENSEMBL:
Gene Tree for CYCSP45 (if available)
TreeFam:
Gene Tree for CYCSP45 (if available)

No data available for Orthologs for CYCSP45 Gene

Paralogs for CYCSP45 Gene

No data available for Paralogs for CYCSP45 Gene

Variants for CYCSP45 Gene

Relevant External Links for CYCSP45 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP45

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP45 Gene

Disorders for CYCSP45 Gene

No disorders were found for CYCSP45 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP45 Gene

Publications for CYCSP45 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64

Products for CYCSP45 Gene

Sources for CYCSP45 Gene

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