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Aliases for CYCSP39 Gene

Subcategory (RNA class) for CYCSP39 Gene

lncRNA

Aliases for CYCSP39 Gene

  • Cytochrome C, Somatic Pseudogene 39 2 3 5
  • HCP39 3
  • HC1 3

External Ids for CYCSP39 Gene

ORGUL Members for CYCSP39 Gene

Previous GeneCards Identifiers for CYCSP39 Gene

  • GC16M025374

Summaries for CYCSP39 Gene

GeneCards Summary for CYCSP39 Gene

CYCSP39 (Cytochrome C, Somatic Pseudogene 39) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP39 Gene

Genomics for CYCSP39 Gene

Genomic Location for CYCSP39 Gene

Chromosome:
16
Start:
25,454,339 bp from pter
End:
25,454,647 bp from pter
Size:
309 bases
Orientation:
Minus strand

Genomic View for CYCSP39 Gene

Genes around CYCSP39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP39 Gene

No data available for Regulatory Elements for CYCSP39 Gene

Proteins for CYCSP39 Gene

Post-translational modifications for CYCSP39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP39 Gene

Domains & Families for CYCSP39 Gene

Suggested Antigen Peptide Sequences for CYCSP39 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for CYCSP39 Gene

Function for CYCSP39 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP39 Gene

Localization for CYCSP39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP39 Gene

Pathways & Interactions for CYCSP39 Gene

SuperPathways for CYCSP39 Gene

No Data Available

Interacting Proteins for CYCSP39 Gene

Gene Ontology (GO) - Biological Process for CYCSP39 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP39 Gene

Drugs & Compounds for CYCSP39 Gene

No Compound Related Data Available

Transcripts for CYCSP39 Gene

mRNA/cDNA for CYCSP39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP39 Gene

No ASD Table

Relevant External Links for CYCSP39 Gene

GeneLoc Exon Structure for
CYCSP39
ECgene alternative splicing isoforms for
CYCSP39

Expression for CYCSP39 Gene

mRNA expression in normal human tissues for CYCSP39 Gene

genes like me logo Genes that share expression patterns with CYCSP39: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CYCSP39 Gene

Orthologs for CYCSP39 Gene

Evolution for CYCSP39 Gene

ENSEMBL:
Gene Tree for CYCSP39 (if available)
TreeFam:
Gene Tree for CYCSP39 (if available)

No data available for Orthologs for CYCSP39 Gene

Paralogs for CYCSP39 Gene

No data available for Paralogs for CYCSP39 Gene

Variants for CYCSP39 Gene

Relevant External Links for CYCSP39 Gene

HapMap Linkage Disequilibrium report
CYCSP39

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP39 Gene

Disorders for CYCSP39 Gene

Relevant External Links for CYCSP39

Genetic Association Database (GAD)
CYCSP39

No disorders were found for CYCSP39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CYCSP39 Gene

Publications for CYCSP39 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 67
  2. The human somatic cytochrome c gene: two classes of processed pseudogenes demarcate a period of rapid molecular evolution. (PMID: 2849112) Evans M.J. … Scarpulla R.C. (Proc. Natl. Acad. Sci. U.S.A. 1988) 2 3

Products for CYCSP39 Gene

Sources for CYCSP39 Gene

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