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Aliases for CYCSP34 Gene

Subcategory (RNA class) for CYCSP34 Gene

lncRNA

Aliases for CYCSP34 Gene

  • Cytochrome C, Somatic Pseudogene 34 2 3 5
  • HCP34 3

External Ids for CYCSP34 Gene

ORGUL Members for CYCSP34 Gene

Previous GeneCards Identifiers for CYCSP34 Gene

  • GC13M040336
  • GC13M040337
  • GC13M041438

Summaries for CYCSP34 Gene

GeneCards Summary for CYCSP34 Gene

CYCSP34 (Cytochrome C, Somatic Pseudogene 34) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP34 Gene

Genomics for CYCSP34 Gene

Regulatory Elements for CYCSP34 Gene

Enhancers for CYCSP34 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F040920 0.4 ENCODE 10.6 -57.9 -57853 3.0 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF48 ZNF2 YY1 GLIS2 ZNF143 WBP4 CYCSP34 SLC25A15 TPTE2P5 SUGT1P3
GH13F040932 0.7 ENCODE 10.4 -70.0 -69970 2.3 CYCSP34 SUGT1P3 PIR56183
GH13F040962 0.8 ENCODE 10.1 -100.2 -100246 2.4 ARNT CREB3L1 JUN GATA3 CTBP1 ZNF600 FOSL2 FOS ZNF680 ZNF687 CYCSP34 PIR56183 RGS17P1
GH13F040636 1 Ensembl ENCODE 9.9 +224.7 224706 5.6 JUN ZNF140 NR2F2 JUND ATF3 FOS NR2F6 ZNF600 TRIM28 FOXO1 TPTE2P5 CYCSP34 WBP4 SLC25A15 GC13P040625 PIR36841
GH13F040679 0.2 ENCODE 9.9 +183.9 183946 0.8 ZFP64 FOXA3 HLF ZNF140 ZBTB8A ZNF781 ZNF518A PRDM12 ZNF548 TPTE2P5 KBTBD6 CYCSP34 SLC25A15 GC13P040667 GC13P040698
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CYCSP34 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP34 Gene

Chromosome:
13
Start:
40,863,594 bp from pter
End:
40,863,906 bp from pter
Size:
313 bases
Orientation:
Minus strand

Genomic View for CYCSP34 Gene

Genes around CYCSP34 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP34 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP34 Gene

Proteins for CYCSP34 Gene

Post-translational modifications for CYCSP34 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP34 Gene

Domains & Families for CYCSP34 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP34 Gene

Function for CYCSP34 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP34 Gene

Localization for CYCSP34 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP34 Gene

Pathways & Interactions for CYCSP34 Gene

SuperPathways for CYCSP34 Gene

No Data Available

Interacting Proteins for CYCSP34 Gene

Gene Ontology (GO) - Biological Process for CYCSP34 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP34 Gene

Transcripts for CYCSP34 Gene

mRNA/cDNA for CYCSP34 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP34 Gene

No ASD Table

Relevant External Links for CYCSP34 Gene

GeneLoc Exon Structure for
CYCSP34
ECgene alternative splicing isoforms for
CYCSP34

Expression for CYCSP34 Gene

mRNA expression in normal human tissues for CYCSP34 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP34 Gene:

CYCSP34
genes like me logo Genes that share expression patterns with CYCSP34: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYCSP34 Gene

Orthologs for CYCSP34 Gene

Evolution for CYCSP34 Gene

ENSEMBL:
Gene Tree for CYCSP34 (if available)
TreeFam:
Gene Tree for CYCSP34 (if available)

No data available for Orthologs for CYCSP34 Gene

Paralogs for CYCSP34 Gene

No data available for Paralogs for CYCSP34 Gene

Variants for CYCSP34 Gene

Relevant External Links for CYCSP34 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP34 Gene

Disorders for CYCSP34 Gene

No disorders were found for CYCSP34 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP34 Gene

Publications for CYCSP34 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64

Products for CYCSP34 Gene

Sources for CYCSP34 Gene

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