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Aliases for CYCSP34 Gene

Subcategory (RNA class) for CYCSP34 Gene

lncRNA

Aliases for CYCSP34 Gene

  • Cytochrome C, Somatic Pseudogene 34 2 3 5
  • HCP34 3

External Ids for CYCSP34 Gene

ORGUL Members for CYCSP34 Gene

Previous GeneCards Identifiers for CYCSP34 Gene

  • GC13M040336
  • GC13M040337
  • GC13M041438

Summaries for CYCSP34 Gene

GeneCards Summary for CYCSP34 Gene

CYCSP34 (Cytochrome C, Somatic Pseudogene 34) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP34 Gene

Genomics for CYCSP34 Gene

Regulatory Elements for CYCSP34 Gene

Enhancers for CYCSP34 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G040972 1.8 FANTOM5 Ensembl ENCODE dbSUPER 8.9 -115.8 -115819 15.1 PKNOX1 FOXA2 ARNT WRNIP1 ZFP64 FEZF1 YY1 FOS JUNB REST ELF1 WBP4 CYCSP34 SUGT1P3 RGCC NAA16 FOXO1 RGS17P1 PIR56183
GH13G040920 1.3 Ensembl ENCODE 10.6 -57.9 -57853 3.0 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 WBP4 CYCSP34 SLC25A15 SUGT1P3 TPTE2P5
GH13G040962 1.3 Ensembl ENCODE dbSUPER 10.1 -100.2 -100246 2.4 CREB3L1 ARNT JUN FOSL1 CTBP1 GATA3 FOSL2 ZNF600 FOS ZNF680 CYCSP34 PIR56183 RGS17P1
GH13G040991 1.3 Ensembl ENCODE dbSUPER 8.9 -130.6 -130636 5.5 ZFP64 SIN3A RAD21 SCRT2 FOS RCOR1 RELB GATAD2B ZNF217 SMARCA4 WBP4 ELF1 CYCSP34 SLC25A15 RGS17P1 GC13M041023
GH13G041001 1.5 Ensembl ENCODE dbSUPER 6.7 -141.4 -141436 8.1 PKNOX1 FOXA2 MLX ARID4B DMAP1 YY1 SLC30A9 CBX5 FOS JUNB WBP4 ELF1 CYCSP34 SLC25A15 RGS17P1 GC13M041023
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP34 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP34 Gene

Chromosome:
13
Start:
40,863,594 bp from pter
End:
40,863,906 bp from pter
Size:
313 bases
Orientation:
Minus strand

Genomic View for CYCSP34 Gene

Genes around CYCSP34 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP34 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP34 Gene

Proteins for CYCSP34 Gene

Post-translational modifications for CYCSP34 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP34 Gene

Domains & Families for CYCSP34 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP34 Gene

Function for CYCSP34 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP34 Gene

Localization for CYCSP34 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP34 Gene

Pathways & Interactions for CYCSP34 Gene

SuperPathways for CYCSP34 Gene

No Data Available

Interacting Proteins for CYCSP34 Gene

Gene Ontology (GO) - Biological Process for CYCSP34 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP34 Gene

Drugs & Compounds for CYCSP34 Gene

No Compound Related Data Available

Transcripts for CYCSP34 Gene

mRNA/cDNA for CYCSP34 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP34 Gene

No ASD Table

Relevant External Links for CYCSP34 Gene

GeneLoc Exon Structure for
CYCSP34
ECgene alternative splicing isoforms for
CYCSP34

Expression for CYCSP34 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP34 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP34 Gene:

CYCSP34
genes like me logo Genes that share expression patterns with CYCSP34: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP34 Gene

Orthologs for CYCSP34 Gene

Evolution for CYCSP34 Gene

ENSEMBL:
Gene Tree for CYCSP34 (if available)
TreeFam:
Gene Tree for CYCSP34 (if available)

No data available for Orthologs for CYCSP34 Gene

Paralogs for CYCSP34 Gene

No data available for Paralogs for CYCSP34 Gene

Variants for CYCSP34 Gene

Relevant External Links for CYCSP34 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP34 Gene

Disorders for CYCSP34 Gene

No disorders were found for CYCSP34 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP34 Gene

Publications for CYCSP34 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64

Products for CYCSP34 Gene

Sources for CYCSP34 Gene

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