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Aliases for CYCSP24 Gene

Subcategory (RNA class) for CYCSP24 Gene

lncRNA

Aliases for CYCSP24 Gene

  • Cytochrome C, Somatic Pseudogene 24 2 3 5
  • HCP24 3
  • HCP31 3
  • HC3 3

External Ids for CYCSP24 Gene

ORGUL Members for CYCSP24 Gene

Previous GeneCards Identifiers for CYCSP24 Gene

  • GC09P093880
  • GC09P095840
  • GC09P096801

Summaries for CYCSP24 Gene

GeneCards Summary for CYCSP24 Gene

CYCSP24 (Cytochrome C, Somatic Pseudogene 24) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP24 Gene

Genomics for CYCSP24 Gene

Regulatory Elements for CYCSP24 Gene

Enhancers for CYCSP24 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F094029 1.1 ENCODE 0.4 -6.9 -6894 2.6 PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 FOS ZNF263 PTPDC1 BARX1 CYCSP24
GH09F094065 0.9 Ensembl ENCODE 0.3 +27.7 27741 0.5 MEF2D CTCF ZNF654 ARNT SMC3 TRIM22 REST RAD21 MIRLET7A1 MIRLET7D MIRLET7F1 CYCSP24 LOC105376152
GH09F094084 1.1 Ensembl ENCODE 0.2 +46.9 46934 2.1 TBP MAX BMI1 ZIC2 ZNF644 ZFHX2 POLR2A PRDM10 NR2F6 TCF7L2 MIRLET7D MIRLET7A1 MIRLET7F1 PTPDC1 CYCSP24 LOC105376152
GH09F094055 0.6 ENCODE 0.3 +18.6 18591 1.5 CBX3 JUN JUNB NR2F2 ZNF274 CBX5 ZNF143 TRIM24 TRIM28 BARX1 CYCSP24 LOC105376152
GH09F094097 0.9 Ensembl ENCODE 0.2 +59.9 59883 1.1 FEZF1 ATF2 ZNF23 ZNF316 JUND ZFHX2 FOSL2 FOS PRDM10 ZNF600 MIRLET7D LOC105376152 CYCSP24
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP24 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP24 Gene

Chromosome:
9
Start:
94,038,030 bp from pter
End:
94,038,345 bp from pter
Size:
316 bases
Orientation:
Plus strand

Genomic View for CYCSP24 Gene

Genes around CYCSP24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP24 Gene

Proteins for CYCSP24 Gene

Post-translational modifications for CYCSP24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP24 Gene

Domains & Families for CYCSP24 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP24 Gene

Function for CYCSP24 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP24 Gene

Localization for CYCSP24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP24 Gene

Pathways & Interactions for CYCSP24 Gene

SuperPathways for CYCSP24 Gene

No Data Available

Interacting Proteins for CYCSP24 Gene

Gene Ontology (GO) - Biological Process for CYCSP24 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP24 Gene

Transcripts for CYCSP24 Gene

mRNA/cDNA for CYCSP24 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP24 Gene

No ASD Table

Relevant External Links for CYCSP24 Gene

GeneLoc Exon Structure for
CYCSP24
ECgene alternative splicing isoforms for
CYCSP24

Expression for CYCSP24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP24 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP24 Gene:

CYCSP24
genes like me logo Genes that share expression patterns with CYCSP24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYCSP24 Gene

Orthologs for CYCSP24 Gene

Evolution for CYCSP24 Gene

ENSEMBL:
Gene Tree for CYCSP24 (if available)
TreeFam:
Gene Tree for CYCSP24 (if available)

No data available for Orthologs for CYCSP24 Gene

Paralogs for CYCSP24 Gene

No data available for Paralogs for CYCSP24 Gene

Variants for CYCSP24 Gene

Relevant External Links for CYCSP24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP24 Gene

Disorders for CYCSP24 Gene

Relevant External Links for CYCSP24

Genetic Association Database (GAD)
CYCSP24

No disorders were found for CYCSP24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CYCSP24 Gene

Publications for CYCSP24 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64
  2. The human somatic cytochrome c gene: two classes of processed pseudogenes demarcate a period of rapid molecular evolution. (PMID: 2849112) Evans M.J. … Scarpulla R.C. (Proc. Natl. Acad. Sci. U.S.A. 1988) 2 3 64
  3. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64

Products for CYCSP24 Gene

Sources for CYCSP24 Gene

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