Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CYCSP23 Gene

Subcategory (RNA class) for CYCSP23 Gene

lncRNA

Aliases for CYCSP23 Gene

  • Cytochrome C, Somatic Pseudogene 23 2 3 5
  • HCP23 3

External Ids for CYCSP23 Gene

ORGUL Members for CYCSP23 Gene

Previous GeneCards Identifiers for CYCSP23 Gene

  • GC08M120701
  • GC08M120630

Summaries for CYCSP23 Gene

GeneCards Summary for CYCSP23 Gene

CYCSP23 (Cytochrome C, Somatic Pseudogene 23) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP23 Gene

Genomics for CYCSP23 Gene

Regulatory Elements for CYCSP23 Gene

Enhancers for CYCSP23 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F119614 0.8 Ensembl ENCODE 0.8 +3.4 3367 1.8 HLF CEBPA CEBPB CEBPG FOS ENPP2 CYCSP23 LOC392264
GH08F119578 1.4 FANTOM5 Ensembl ENCODE 0.3 +38.2 38181 4.0 CTCF BACH1 ZNF316 TRIM24 NFE2 FOS MAFK NFE2L2 EGR2 ZNF263 CYCSP23 LOC392264
GH08F119655 1.2 Ensembl ENCODE 0.3 -36.8 -36827 0.6 PKNOX1 ATF1 ARID4B YY1 ELK1 FOS SP5 PPARG KAT8 MBD2 LOC105375727 CYCSP23
GH08F119648 1 Ensembl ENCODE 0.3 -30.1 -30120 0.4 TBP PKNOX1 MAX BMI1 EBF1 ZBTB40 RELA EED ETV6 PAF1 LOC105375727 CYCSP23
GH08F119585 0.9 Ensembl ENCODE 0.3 +32.1 32057 2.2 MAFG JUND ARID3A ZFHX2 ZNF316 FOS MAFK EGR2 CYCSP23 LOC392264
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP23 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP23 Gene

Chromosome:
8
Start:
119,618,156 bp from pter
End:
119,618,474 bp from pter
Size:
319 bases
Orientation:
Minus strand

Genomic View for CYCSP23 Gene

Genes around CYCSP23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP23 Gene

Proteins for CYCSP23 Gene

Post-translational modifications for CYCSP23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP23 Gene

Domains & Families for CYCSP23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP23 Gene

Function for CYCSP23 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP23 Gene

Localization for CYCSP23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP23 Gene

Pathways & Interactions for CYCSP23 Gene

SuperPathways for CYCSP23 Gene

No Data Available

Interacting Proteins for CYCSP23 Gene

Gene Ontology (GO) - Biological Process for CYCSP23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP23 Gene

Transcripts for CYCSP23 Gene

mRNA/cDNA for CYCSP23 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP23 Gene

No ASD Table

Relevant External Links for CYCSP23 Gene

GeneLoc Exon Structure for
CYCSP23
ECgene alternative splicing isoforms for
CYCSP23

Expression for CYCSP23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP23 Gene

mRNA differential expression in normal tissues according to GTEx for CYCSP23 Gene

This gene is overexpressed in Breast - Mammary Tissue (x5.5), Adipose - Subcutaneous (x5.3), and Uterus (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of CYCSP23 Gene:

CYCSP23
genes like me logo Genes that share expression patterns with CYCSP23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CYCSP23 Gene

Orthologs for CYCSP23 Gene

Evolution for CYCSP23 Gene

ENSEMBL:
Gene Tree for CYCSP23 (if available)
TreeFam:
Gene Tree for CYCSP23 (if available)

No data available for Orthologs for CYCSP23 Gene

Paralogs for CYCSP23 Gene

No data available for Paralogs for CYCSP23 Gene

Variants for CYCSP23 Gene

Relevant External Links for CYCSP23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP23 Gene

Disorders for CYCSP23 Gene

No disorders were found for CYCSP23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP23 Gene

Publications for CYCSP23 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64

Products for CYCSP23 Gene

Sources for CYCSP23 Gene

Content
Loading form....