Free for academic non-profit institutions. Other users need a Commercial license

CYCSP2 Gene(Pseudogene)

Cytochrome C, Somatic Pseudogene 2

GCID:
GC15P041108
GIFtS:
13
Genes Participants
UDN Logo

Aliases for CYCSP2 Gene

Subcategory (RNA class) for CYCSP2 Gene

antisense

Aliases for CYCSP2 Gene

  • Cytochrome C, Somatic Pseudogene 2 2 3 5
  • HCP37 3

External Ids for CYCSP2 Gene

ORGUL Members for CYCSP2 Gene

Previous GeneCards Identifiers for CYCSP2 Gene

  • GC15P039188
  • GC15P041401

Summaries for CYCSP2 Gene

GeneCards Summary for CYCSP2 Gene

CYCSP2 (Cytochrome C, Somatic Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP2 Gene

Genomics for CYCSP2 Gene

Products:

  1. Regulatory Element

Regulatory Elements for CYCSP2 Gene

Enhancers for CYCSP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G041114 1.2 ENCODE 0.4 +7.3 7255 2.9 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 PPARGC1A DNAJC17 NDUFAF1 INO80 ENSG00000259617 CYCSP2
GH15G041104 0.2 ENCODE 0.7 -4.4 -4448 0.2 DLL4 CYCSP2 GC15M041033
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP2 Gene

Chromosome:
15
Start:
41,108,865 bp from pter
End:
41,109,178 bp from pter
Size:
314 bases
Orientation:
Plus strand

Genomic View for CYCSP2 Gene

Genes around CYCSP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for CYCSP2 Gene

Proteins for CYCSP2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for CYCSP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP2 Gene

Domains & Families for CYCSP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP2 Gene

Function for CYCSP2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP2 Gene

Localization for CYCSP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CYCSP2 Gene

Pathways & Interactions for CYCSP2 Gene

SuperPathways for CYCSP2 Gene

PathCards logo More details on SuperPathways for CYCSP2
No Data Available

Interacting Proteins for CYCSP2 Gene

Gene Ontology (GO) - Biological Process for CYCSP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP2 Gene

Drugs & Compounds for CYCSP2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for CYCSP2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for CYCSP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP2 Gene

No ASD Table

Relevant External Links for CYCSP2 Gene

GeneLoc Exon Structure for
CYCSP2
ECgene alternative splicing isoforms for
CYCSP2

Expression for CYCSP2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP2 Gene

mRNA expression in normal human tissues for CYCSP2 Gene
mRNA expression by GTEx for CYCSP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP2 Gene:

CYCSP2
genes like me logo Genes that share expression patterns with CYCSP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP2 Gene

Orthologs for CYCSP2 Gene

Evolution for CYCSP2 Gene

ENSEMBL:
Gene Tree for CYCSP2 (if available)
TreeFam:
Gene Tree for CYCSP2 (if available)

No data available for Orthologs for CYCSP2 Gene

Paralogs for CYCSP2 Gene

No data available for Paralogs for CYCSP2 Gene

Variants for CYCSP2 Gene

Relevant External Links for CYCSP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP2 Gene

Disorders for CYCSP2 Gene

No disorders were found for CYCSP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP2 Gene

Publications for CYCSP2 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z. … Gerstein M. (Gene 2003) 2 3 64

Products for CYCSP2 Gene

Sources for CYCSP2 Gene

Content
Loading form....