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Aliases for CYCSP10 Gene

Subcategory (RNA class) for CYCSP10 Gene

lncRNA

Aliases for CYCSP10 Gene

  • Cytochrome C, Somatic Pseudogene 10 2 3 5
  • HCP10 3

External Ids for CYCSP10 Gene

ORGUL Members for CYCSP10 Gene

Previous GeneCards Identifiers for CYCSP10 Gene

  • GC03M010018
  • GC03M010043
  • GC03M010044

Summaries for CYCSP10 Gene

GeneCards Summary for CYCSP10 Gene

CYCSP10 (Cytochrome C, Somatic Pseudogene 10) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CYCSP10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP10 Gene

Genomics for CYCSP10 Gene

Regulatory Elements for CYCSP10 Gene

Enhancers for CYCSP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H009730 1.2 ENCODE 32.5 +268.9 268914 3 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 SETD5 BRPF1 SRGAP3-AS3 THUMPD3-AS1 CYCSP10 RAD18 SRGAP3-AS1 ENSG00000269982 ENSG00000269886 EMC3-AS1
GH03H009141 0.9 ENCODE 42 +859.2 859150 1 PKNOX1 ZSCAN4 INSM2 FEZF1 ZNF2 ZNF366 ZSCAN5C ZNF391 OVOL3 TSHZ1 CYCSP10 THUMPD3-AS1 SETD5 RAD18 ENSG00000269894 THUMPD3 GC03P009098 SRGAP3-AS2
GH03H010188 2.1 FANTOM5 Ensembl ENCODE dbSUPER 12.8 -193.9 -193898 12 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A ZNF2 ZBTB7B YY1 ZNF143 BRPF1 SETD5 IRAK2 GHRLOS LINC00852 TATDN2 FANCD2 BRK1 GHRL TTLL3
GH03H010024 1.2 ENCODE 12.2 -25.3 -25306 2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 SLC30A9 CBX5 ZNF207 ZNF143 SRGAP3-AS3 BRK1 ATP2B2-IT1 ENSG00000230599 FANCD2OS CRELD1 CYCSP10 FANCD2 CIDECP MARK2P2
GH03H009945 1 ENCODE 10.7 +53.9 53864 2 MLX ARID4B SIN3A DMAP1 ZNF2 SLC30A9 GLIS2 ELK1 ZNF143 KLF7 THUMPD3-AS1 CYCSP10 ENSG00000269894 EMC3-AS1 PRRT3-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CYCSP10 on UCSC Golden Path with GeneCards custom track

Genomic Location for CYCSP10 Gene

Chromosome:
3
Start:
10,000,640 bp from pter
End:
10,000,947 bp from pter
Size:
308 bases
Orientation:
Minus strand

Genomic View for CYCSP10 Gene

Genes around CYCSP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP10 Gene

Proteins for CYCSP10 Gene

Post-translational modifications for CYCSP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP10 Gene

Domains & Families for CYCSP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP10 Gene

Function for CYCSP10 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CYCSP10
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP10 Gene

Localization for CYCSP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP10 Gene

Pathways & Interactions for CYCSP10 Gene

SuperPathways for CYCSP10 Gene

No Data Available

Interacting Proteins for CYCSP10 Gene

Gene Ontology (GO) - Biological Process for CYCSP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP10 Gene

Drugs & Compounds for CYCSP10 Gene

No Compound Related Data Available

Transcripts for CYCSP10 Gene

mRNA/cDNA for CYCSP10 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CYCSP10
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP10 Gene

No ASD Table

Relevant External Links for CYCSP10 Gene

GeneLoc Exon Structure for
CYCSP10
ECgene alternative splicing isoforms for
CYCSP10

Expression for CYCSP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP10 Gene

mRNA differential expression in normal tissues according to GTEx for CYCSP10 Gene

This gene is overexpressed in Testis (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of CYCSP10 Gene:

CYCSP10
genes like me logo Genes that share expression patterns with CYCSP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP10 Gene

Orthologs for CYCSP10 Gene

Evolution for CYCSP10 Gene

ENSEMBL:
Gene Tree for CYCSP10 (if available)
TreeFam:
Gene Tree for CYCSP10 (if available)

No data available for Orthologs for CYCSP10 Gene

Paralogs for CYCSP10 Gene

No data available for Paralogs for CYCSP10 Gene

Variants for CYCSP10 Gene

Relevant External Links for CYCSP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP10 Gene

Disorders for CYCSP10 Gene

No disorders were found for CYCSP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP10 Gene

Publications for CYCSP10 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 60

Products for CYCSP10 Gene

Sources for CYCSP10 Gene

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