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Aliases for CXorf66 Gene

Aliases for CXorf66 Gene

  • Chromosome X Open Reading Frame 66 2 3 5
  • Secreted Glycoprotein, X-Linked 3
  • Secreted Glycoprotein 2
  • RP11-35F15.2 3
  • X-Linked 2
  • SGPX 3

External Ids for CXorf66 Gene

Previous GeneCards Identifiers for CXorf66 Gene

  • GC0XM138866
  • GC0XM139037
  • GC0XM128305

Summaries for CXorf66 Gene

Entrez Gene Summary for CXorf66 Gene

  • The protein encoded by this gene is predicted to be a type I membrane protein, however, its exact function is not known. [provided by RefSeq, Sep 2009]

GeneCards Summary for CXorf66 Gene

CXorf66 (Chromosome X Open Reading Frame 66) is a Protein Coding gene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXorf66 Gene

Genomics for CXorf66 Gene

Genomic Location for CXorf66 Gene

Chromosome:
X
Start:
139,955,725 bp from pter
End:
139,965,520 bp from pter
Size:
9,796 bases
Orientation:
Minus strand

Genomic View for CXorf66 Gene

Genes around CXorf66 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXorf66 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXorf66 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXorf66 Gene

No data available for Regulatory Elements for CXorf66 Gene

Proteins for CXorf66 Gene

  • Protein details for CXorf66 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5JRM2-CX066_HUMAN
    Recommended name:
    Uncharacterized protein CXorf66
    Protein Accession:
    Q5JRM2

    Protein attributes for CXorf66 Gene

    Size:
    361 amino acids
    Molecular mass:
    39944 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CXorf66 Gene

Proteomics data for CXorf66 Gene at MOPED

Post-translational modifications for CXorf66 Gene

  • Glycosylation at Asn 24
  • Modification sites at PhosphoSitePlus

Other Protein References for CXorf66 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CXorf66 Gene

Domains & Families for CXorf66 Gene

Protein Domains for CXorf66 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CXorf66: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXorf66 Gene

Function for CXorf66 Gene

genes like me logo Genes that share phenotypes with CXorf66: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXorf66 Gene

Localization for CXorf66 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CXorf66 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CXorf66 Gene COMPARTMENTS Subcellular localization image for CXorf66 gene
Compartment Confidence
extracellular 3
golgi apparatus 1
peroxisome 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for CXorf66 Gene

Pathways & Interactions for CXorf66 Gene

SuperPathways for CXorf66 Gene

No Data Available

Interacting Proteins for CXorf66 Gene

Gene Ontology (GO) - Biological Process for CXorf66 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CXorf66 Gene

Drugs & Compounds for CXorf66 Gene

No Compound Related Data Available

Transcripts for CXorf66 Gene

mRNA/cDNA for CXorf66 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXorf66 Gene

Chromosome X open reading frame 66:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXorf66 Gene

No ASD Table

Relevant External Links for CXorf66 Gene

GeneLoc Exon Structure for
CXorf66
ECgene alternative splicing isoforms for
CXorf66

Expression for CXorf66 Gene

mRNA expression in normal human tissues for CXorf66 Gene

mRNA differential expression in normal tissues according to GTEx for CXorf66 Gene

This gene is overexpressed in Testis (x52.3).

Protein differential expression in normal tissues from HIPED for CXorf66 Gene

This gene is overexpressed in Heart (45.7) and Testis (23.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CXorf66 Gene



SOURCE GeneReport for Unigene cluster for CXorf66 Gene Hs.121384

genes like me logo Genes that share expression patterns with CXorf66: view

Protein tissue co-expression partners for CXorf66 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CXorf66 Gene

Orthologs for CXorf66 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CXorf66 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CXHXorf66 35
  • 98.61 (n)
  • 97.78 (a)
CXorf66 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 35 (a)
OneToMany
CXHXorf66 36
  • 36 (a)
OneToMany
CXHXorf66 36
  • 35 (a)
OneToMany
LOC787011 35
  • 61.06 (n)
  • 39.76 (a)
dog
(Canis familiaris)
Mammalia CXHXorf66 35
  • 71.11 (n)
  • 47.83 (a)
CXorf66 36
  • 44 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm7073 36
  • 30 (a)
OneToOne
Gm7073 16
Gm7073 35
  • 61.24 (n)
  • 37.97 (a)
rat
(Rattus norvegicus)
Mammalia LOC688842 35
  • 59.56 (n)
  • 38.64 (a)
Species with no ortholog for CXorf66:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CXorf66 Gene

ENSEMBL:
Gene Tree for CXorf66 (if available)
TreeFam:
Gene Tree for CXorf66 (if available)

Paralogs for CXorf66 Gene

No data available for Paralogs for CXorf66 Gene

Variants for CXorf66 Gene

Sequence variations from dbSNP and Humsavar for CXorf66 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs5955139 - 139,956,284(+) CCTGT(A/G)GACCG reference, missense
rs4628444 -- 139,967,377(+) TTGCT(C/T)CCAAT upstream-variant-2KB
rs5953892 -- 139,956,809(+) AGAAC(A/G)TATGG intron-variant
rs5953894 -- 139,965,071(+) AACTT(A/G)AAGTA intron-variant
rs5953897 -- 139,966,306(+) aggtt(A/G)cagtg upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CXorf66 Gene

Variant ID Type Subtype PubMed ID
esv2672915 CNV Deletion 23128226

Variation tolerance for CXorf66 Gene

Residual Variation Intolerance Score: 73.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.15; 3.46% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CXorf66 Gene

HapMap Linkage Disequilibrium report
CXorf66

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CXorf66 Gene

Disorders for CXorf66 Gene

Relevant External Links for CXorf66

Genetic Association Database (GAD)
CXorf66
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CXorf66

No disorders were found for CXorf66 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXorf66 Gene

Publications for CXorf66 Gene

  1. A novel transmembrane glycoprotein cancer biomarker present in the X chromosome. (PMID: 24709545) Delgado A.P. … Narayanan R. (Cancer Genomics Proteomics 2014) 2 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CXorf66 Gene

Sources for CXorf66 Gene

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