Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CXorf58 Gene

Aliases for CXorf58 Gene

  • Chromosome X Open Reading Frame 58 2 3

External Ids for CXorf58 Gene

Previous GeneCards Identifiers for CXorf58 Gene

  • GC0XP023835
  • GC0XP021670

Summaries for CXorf58 Gene

GeneCards Summary for CXorf58 Gene

CXorf58 (Chromosome X Open Reading Frame 58) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXorf58 Gene

Genomics for CXorf58 Gene

Regulatory Elements for CXorf58 Gene

Genomic Location for CXorf58 Gene

Start:
23,907,801 bp from pter
End:
23,939,507 bp from pter
Size:
31,707 bases
Orientation:
Plus strand

Genomic View for CXorf58 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CXorf58 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXorf58 Gene

Proteins for CXorf58 Gene

  • Protein details for CXorf58 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96LI9-CX058_HUMAN
    Recommended name:
    Putative uncharacterized protein CXorf58
    Protein Accession:
    Q96LI9
    Secondary Accessions:

    Protein attributes for CXorf58 Gene

    Size:
    332 amino acids
    Molecular mass:
    38899 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CXorf58 Gene

Proteomics data for CXorf58 Gene at MOPED

Post-translational modifications for CXorf58 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CXorf58 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CXorf58 Gene

Domains for CXorf58 Gene

Protein Domains for CXorf58 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for CXorf58 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CXorf58: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CXorf58 Gene

Function for CXorf58 Gene

Phenotypes for CXorf58 Gene

GenomeRNAi human phenotypes for CXorf58:
genes like me logo Genes that share phenotypes with CXorf58: view

miRNA for CXorf58 Gene

miRTarBase miRNAs that target CXorf58

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for CXorf58 Gene

Localization for CXorf58 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CXorf58 Gene COMPARTMENTS Subcellular localization image for CXorf58 gene
Compartment Confidence
mitochondrion 2
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CXorf58 Gene

Pathways for CXorf58 Gene

SuperPathways for CXorf58 Gene

No Data Available

Interacting Proteins for CXorf58 Gene

Gene Ontology (GO) - Biological Process for CXorf58 Gene

None

No data available for Pathways by source for CXorf58 Gene

Transcripts for CXorf58 Gene

mRNA/cDNA for CXorf58 Gene

(4) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXorf58 Gene

Chromosome X open reading frame 58:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXorf58 Gene

No ASD Table

Relevant External Links for CXorf58 Gene

GeneLoc Exon Structure for
CXorf58
ECgene alternative splicing isoforms for
CXorf58

Expression for CXorf58 Gene

mRNA expression in normal human tissues for CXorf58 Gene

mRNA differential expression in normal tissues according to GTEx for CXorf58 Gene

This gene is overexpressed in Testis (24.7).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CXorf58 Gene

SOURCE GeneReport for Unigene cluster for CXorf58 Gene Hs.351265

genes like me logo Genes that share expressions with CXorf58: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CXorf58 Gene

Orthologs for CXorf58 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CXorf58 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia CXHXorf58 35
  • 76.63 (n)
  • 61.41 (a)
MGC165780 36
  • 58 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CXHXorf58 35
  • 78.84 (n)
  • 61.3 (a)
CXorf58 36
  • 55 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 4932442L08Rik 16
LOC102640868 35
  • 72.29 (n)
  • 56.69 (a)
oppossum
(Monodelphis domestica)
Mammalia CXorf58 36
  • 52 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CXorf58 36
  • 37 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC685700 35
  • 76.89 (n)
  • 61.35 (a)
lizard
(Anolis carolinensis)
Reptilia CXorf58 36
  • 47 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia cxorf58 35
  • 58.37 (n)
  • 48.28 (a)
zebrafish
(Danio rerio)
Actinopterygii CXorf58 36
  • 28 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 37 (a)
OneToOne
Species with no ortholog for CXorf58:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CXorf58 Gene

ENSEMBL:
Gene Tree for CXorf58 (if available)
TreeFam:
Gene Tree for CXorf58 (if available)

Paralogs for CXorf58 Gene

No data available for Paralogs for CXorf58 Gene

Variants for CXorf58 Gene

Sequence variations from dbSNP and Humsavar for CXorf58 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs2464711 -- 23,914,160(-) tgcag(G/T)gagcc intron-variant
rs2464715 -- 23,926,590(+) TTGAC(C/T)GCACG intron-variant
rs2464716 -- 23,926,591(+) TGACT(G/T)CACGA intron-variant
rs2520229 -- 23,921,562(-) ATCCA(A/G)GTGTT intron-variant
rs2520230 -- 23,916,085(-) AAGAA(C/T)TGGTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CXorf58 Gene

Variant ID Type Subtype PubMed ID
nsv6836 CNV Insertion 18451855

Relevant External Links for CXorf58 Gene

HapMap Linkage Disequilibrium report
CXorf58
Locus Specific Mutation Databases (LSDB)
CXorf58

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CXorf58 Gene

Disorders for CXorf58 Gene

No disorders were found for CXorf58 Gene.

No data available for UniProtKB/Swiss-Prot for CXorf58 Gene

Publications for CXorf58 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CXorf58 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate CXorf58
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CXorf58
    • Block miRNA regulation of CXorf58 using miScript Target Protectors

    Sources for CXorf58 Gene

    Back to Top

    Content