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Aliases for CXorf49 Gene

Aliases for CXorf49 Gene

  • Chromosome X Open Reading Frame 49 2 3 5
  • Uncharacterized Protein CXorf49 3
  • CXorf49 CXorf49B 4
  • CXorf49B 3

External Ids for CXorf49 Gene

Previous GeneCards Identifiers for CXorf49 Gene

  • GC0XP070902
  • GC0XM070850
  • GC0XP064736
  • GC0XM070934

Summaries for CXorf49 Gene

GeneCards Summary for CXorf49 Gene

CXorf49 (Chromosome X Open Reading Frame 49) is a Protein Coding gene. An important paralog of this gene is CXorf49B.

Additional gene information for CXorf49 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXorf49 Gene

Genomics for CXorf49 Gene

Regulatory Elements for CXorf49 Gene

Genomic Locations for CXorf49 Gene

Genomic Locations for CXorf49 Gene
3,915 bases
Minus strand

Genomic View for CXorf49 Gene

Genes around CXorf49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXorf49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXorf49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXorf49 Gene

Proteins for CXorf49 Gene

  • Protein details for CXorf49 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein CXorf49
    Protein Accession:

    Protein attributes for CXorf49 Gene

    514 amino acids
    Molecular mass:
    54417 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CXorf49 Gene

Post-translational modifications for CXorf49 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CXorf49 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CXorf49 Gene

Domains & Families for CXorf49 Gene

Gene Families for CXorf49 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for CXorf49 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CXorf49: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXorf49 Gene

Function for CXorf49 Gene

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXorf49 Gene

Localization for CXorf49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CXorf49 Gene

Pathways & Interactions for CXorf49 Gene

SuperPathways for CXorf49 Gene

No Data Available

Interacting Proteins for CXorf49 Gene

Gene Ontology (GO) - Biological Process for CXorf49 Gene


No data available for Pathways by source and SIGNOR curated interactions for CXorf49 Gene

Drugs & Compounds for CXorf49 Gene

No Compound Related Data Available

Transcripts for CXorf49 Gene

mRNA/cDNA for CXorf49 Gene

(1) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXorf49 Gene

Chromosome X open reading frame 49:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXorf49 Gene

No ASD Table

Relevant External Links for CXorf49 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CXorf49 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CXorf49 Gene

Protein differential expression in normal tissues from HIPED for CXorf49 Gene

This gene is overexpressed in Testis (44.1), Adipocyte (17.4), and Ovary (7.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CXorf49 Gene

Protein tissue co-expression partners for CXorf49 Gene

NURSA nuclear receptor signaling pathways regulating expression of CXorf49 Gene:


SOURCE GeneReport for Unigene cluster for CXorf49 Gene:

genes like me logo Genes that share expression patterns with CXorf49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXorf49 Gene

Orthologs for CXorf49 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CXorf49 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia LOC737558 33
  • 99.03 (n)
(Canis familiaris)
Mammalia LOC607776 33
  • 71.91 (n)
(Bos Taurus)
Mammalia MGC152340 33
  • 63.43 (n)
(Rattus norvegicus)
Mammalia LOC100361265 33
  • 59.2 (n)
(Mus musculus)
Mammalia LOC102634296 33
  • 55.21 (n)
Species where no ortholog for CXorf49 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CXorf49 Gene

Gene Tree for CXorf49 (if available)
Gene Tree for CXorf49 (if available)

Paralogs for CXorf49 Gene

Paralogs for CXorf49 Gene

genes like me logo Genes that share paralogs with CXorf49: view

Variants for CXorf49 Gene

Sequence variations from dbSNP and Humsavar for CXorf49 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs146243895 -- 71,719,297(+) AGCAG(C/G)TTCAC upstream-variant-2KB
rs35847065 -- 71,718,996(+) TTCCA(C/T)CCGGG upstream-variant-2KB
rs377607746 -- 71,719,165(+) GTAGC(C/T)GTTTG upstream-variant-2KB
rs6625842 -- 71,717,240(+) GCAGC(A/G)GCAGC reference, synonymous-codon
rs6625843 -- 71,718,122(+) GCCCC(A/C)CAAAC reference, missense

Structural Variations from Database of Genomic Variants (DGV) for CXorf49 Gene

Variant ID Type Subtype PubMed ID
nsv9954 CNV loss 18304495
nsv9952 CNV loss 18304495
nsv7449 OTHER inversion 18451855
nsv1147790 CNV duplication 26484159
esv3576925 CNV gain 25503493
esv33082 CNV loss 17666407
esv2758872 CNV loss 17122850
esv2740215 CNV deletion 23290073
esv1584074 OTHER inversion 17803354
dgv516n21 CNV loss 19592680

Relevant External Links for CXorf49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CXorf49 Gene

Disorders for CXorf49 Gene

Relevant External Links for CXorf49

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CXorf49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXorf49 Gene

Publications for CXorf49 Gene

  1. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross MT … Bentley DR (Nature 2005) 4 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 60

Products for CXorf49 Gene

Sources for CXorf49 Gene

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