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Aliases for CXorf49 Gene

Aliases for CXorf49 Gene

  • Chromosome X Open Reading Frame 49 2 3
  • Putative Uncharacterized Protein CXorf49 3
  • Uncharacterized Protein CXorf49 3
  • CXorf49 CXorf49B 4
  • CXorf49B 3

External Ids for CXorf49 Gene

Summaries for CXorf49 Gene

GeneCards Summary for CXorf49 Gene

CXorf49 (Chromosome X Open Reading Frame 49) is a Protein Coding gene. An important paralog of this gene is CXorf49B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXorf49 Gene

Genomics for CXorf49 Gene

Genomic Location for CXorf49 Gene

Start:
71,714,371 bp from pter
End:
71,718,285 bp from pter
Size:
3,915 bases
Orientation:
Minus strand

Genomic View for CXorf49 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CXorf49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXorf49 Gene

Regulatory Elements for CXorf49 Gene

Proteins for CXorf49 Gene

  • Protein details for CXorf49 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MYA2-CX049_HUMAN
    Recommended name:
    Uncharacterized protein CXorf49
    Protein Accession:
    A8MYA2
    Secondary Accessions:

    Protein attributes for CXorf49 Gene

    Size:
    514 amino acids
    Molecular mass:
    54417 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CXorf49 Gene

Proteomics data for CXorf49 Gene at MOPED

Post-translational modifications for CXorf49 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CXorf49 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CXorf49 Gene

Domains for CXorf49 Gene

Protein Domains for CXorf49 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with CXorf49: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CXorf49 Gene

Function for CXorf49 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CXorf49 Gene

Localization for CXorf49 Gene

No data available for Gene Ontology (GO) - Cellular Components for CXorf49 Gene

Pathways for CXorf49 Gene

SuperPathways for CXorf49 Gene

No Data Available

Interacting Proteins for CXorf49 Gene

Gene Ontology (GO) - Biological Process for CXorf49 Gene

None

No data available for Pathways by source for CXorf49 Gene

Transcripts for CXorf49 Gene

mRNA/cDNA for CXorf49 Gene

(1) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXorf49 Gene

Chromosome X open reading frame 49:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXorf49 Gene

No ASD Table

Relevant External Links for CXorf49 Gene

GeneLoc Exon Structure for
CXorf49
ECgene alternative splicing isoforms for
CXorf49

Expression for CXorf49 Gene

mRNA expression in normal human tissues for CXorf49 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CXorf49 Gene

SOURCE GeneReport for Unigene cluster for CXorf49 Gene Hs.632817

genes like me logo Genes that share expressions with CXorf49: view

Orthologs for CXorf49 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CXorf49 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC737558 36
  • 99.03 (n)
  • 97.86 (a)
cow
(Bos Taurus)
Mammalia MGC152340 36
  • 63.43 (n)
  • 44.55 (a)
dog
(Canis familiaris)
Mammalia LOC607776 36
  • 71.91 (n)
  • 58.17 (a)
mouse
(Mus musculus)
Mammalia LOC102634296 36
  • 55.21 (n)
  • 39.06 (a)
rat
(Rattus norvegicus)
Mammalia LOC100361265 36
  • 59.2 (n)
  • 40.8 (a)
Species with no ortholog for CXorf49:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CXorf49 Gene

ENSEMBL:
Gene Tree for CXorf49 (if available)
TreeFam:
Gene Tree for CXorf49 (if available)

Paralogs for CXorf49 Gene

Paralogs for CXorf49 Gene

genes like me logo Genes that share paralogs with CXorf49: view

Variants for CXorf49 Gene

Sequence variations from dbSNP and Humsavar for CXorf49 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs6625843 -- 71,718,122(+) GCCCC(A/C)CAAAC missense, reference
rs35847065 -- 71,718,996(+) TTCCA(C/T)CCGGG upstream-variant-2KB
rs146243895 -- 71,719,297(+) AGCAG(C/G)TTCAC upstream-variant-2KB
rs377607746 -- 71,719,165(+) GTAGC(C/T)GTTTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CXorf49 Gene

Variant ID Type Subtype PubMed ID
esv1584074 OTHER Inversion 17803354
esv33082 CNV Loss 17666407
essv6290 CNV CNV 17122850
dgv2451e1 CNV Complex 17122850
esv2740215 CNV Deletion 23290073
dgv516n21 CNV Loss 19592680
nsv7449 OTHER Inversion 18451855
nsv9952 CNV Loss 18304495
nsv9954 CNV Loss 18304495

Relevant External Links for CXorf49 Gene

HapMap Linkage Disequilibrium report
CXorf49

Disorders for CXorf49 Gene

No disorders were found for CXorf49 Gene.

No data available for UniProtKB/Swiss-Prot for CXorf49 Gene

Publications for CXorf49 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4

Products for CXorf49 Gene

Sources for CXorf49 Gene

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