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Aliases for CXorf40A Gene

Aliases for CXorf40A Gene

  • Chromosome X Open Reading Frame 40A 2 3 5
  • Endothelial-Overexpressed Lipopolysaccharide-Associated Factor 1 2 3 4
  • CXorf40 3 4
  • EOLA1 3 4
  • Chromosome X Open Reading Frame 40 2
  • Protein CXorf40A 3

External Ids for CXorf40A Gene

Previous HGNC Symbols for CXorf40A Gene

  • CXorf40

Previous GeneCards Identifiers for CXorf40A Gene

  • GC0XP148328
  • GC0XP148432
  • GC0XP148623
  • GC0XP137575

Summaries for CXorf40A Gene

GeneCards Summary for CXorf40A Gene

CXorf40A (Chromosome X Open Reading Frame 40A) is a Protein Coding gene. An important paralog of this gene is CXorf40B.

UniProtKB/Swiss-Prot for CXorf40A Gene

  • May have an important role of cell protection in inflammation reaction.

Gene Wiki entry for CXorf40A Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXorf40A Gene

Genomics for CXorf40A Gene

Regulatory Elements for CXorf40A Gene

Enhancers for CXorf40A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG149510 1.6 FANTOM5 Ensembl ENCODE dbSUPER 25.1 -27.4 -27381 5.1 CTCF PKNOX1 JUN CEBPG RAD21 CTBP1 GATA3 ZNF143 SMC3 FOSL2 IDS2 CXorf40A ENSG00000241489 LINC00893 IDS GC0XP149503
GH0XG149502 1.3 ENCODE dbSUPER 28 -35.8 -35829 4.2 HDGF PKNOX1 SIN3A YBX1 ZBTB7B FOS SP3 REST KAT8 ZNF610 CXorf40A LINC00893 ENSG00000241489 TMEM185AP1 CXorf40B LINC00894 IDS2 GC0XP149503 IDS
GH0XG149538 1.3 ENCODE dbSUPER 14.6 +0.2 181 3.1 HDGF PKNOX1 CREB3L1 ARID4B SIN3A ZBTB7B YY1 ZNF143 FOS ZNF263 TMEM185A CXorf40A CXorf40B IDS2 LINC00893
GH0XG149516 0.7 ENCODE 24.7 -23.7 -23707 0.6 RNF2 NR2F1 TAL1 MAFG DPF2 TCF12 ARID1B ZNF316 NCOR1 IKZF1 IDS2 CXorf40A LINC00893 IDS GC0XP149503
GH0XG149520 0.9 ENCODE dbSUPER 11.8 -18.2 -18248 3.2 ATF2 YY1 JUND ATF3 MTA1 HNF4G HNF4A CREM IDS2 CXorf40A IDS IDSP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CXorf40A on UCSC Golden Path with GeneCards custom track

Promoters for CXorf40A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000249334 145 2601 HDGF PKNOX1 CREB3L1 ARID4B SIN3A ZBTB7B YY1 ZNF143 FOS ZNF263

Genomic Location for CXorf40A Gene

149,540,355 bp from pter
149,555,340 bp from pter
14,986 bases
Plus strand

Genomic View for CXorf40A Gene

Genes around CXorf40A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXorf40A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXorf40A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXorf40A Gene

Proteins for CXorf40A Gene

  • Protein details for CXorf40A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein CXorf40A
    Protein Accession:
    Secondary Accessions:
    • A8K784
    • B7Z6H6
    • B7ZL96
    • D6RA72
    • E7ENU3
    • Q2M3E9

    Protein attributes for CXorf40A Gene

    158 amino acids
    Molecular mass:
    17921 Da
    Quaternary structure:
    • Interacts with MT2A.

    Alternative splice isoforms for CXorf40A Gene


neXtProt entry for CXorf40A Gene

Post-translational modifications for CXorf40A Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXorf40A Gene

Domains & Families for CXorf40A Gene

Protein Domains for CXorf40A Gene

Suggested Antigen Peptide Sequences for CXorf40A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CXorf40A: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CXorf40A Gene

Function for CXorf40A Gene

Molecular function for CXorf40A Gene

UniProtKB/Swiss-Prot Function:
May have an important role of cell protection in inflammation reaction.

Gene Ontology (GO) - Molecular Function for CXorf40A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 15541360
genes like me logo Genes that share ontologies with CXorf40A: view
genes like me logo Genes that share phenotypes with CXorf40A: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXorf40A Gene

Localization for CXorf40A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CXorf40A Gene

Pathways & Interactions for CXorf40A Gene

SuperPathways for CXorf40A Gene

No Data Available

Interacting Proteins for CXorf40A Gene

Gene Ontology (GO) - Biological Process for CXorf40A Gene


No data available for Pathways by source and SIGNOR curated interactions for CXorf40A Gene

Drugs & Compounds for CXorf40A Gene

No Compound Related Data Available

Transcripts for CXorf40A Gene

Unigene Clusters for CXorf40A Gene

Chromosome X open reading frame 40A:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXorf40A Gene

No ASD Table

Relevant External Links for CXorf40A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CXorf40A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CXorf40A Gene

Protein differential expression in normal tissues from HIPED for CXorf40A Gene

This gene is overexpressed in Adipocyte (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CXorf40A Gene

Protein tissue co-expression partners for CXorf40A Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of CXorf40A Gene:


SOURCE GeneReport for Unigene cluster for CXorf40A Gene:


mRNA Expression by UniProt/SwissProt for CXorf40A Gene:

Tissue specificity: Expressed primarily in heart, skeletal muscle, kidney, liver and placenta. Relatively high level of expression in spleen, colon and small intestine. Almost no expression in brain, thymus, lung and peripheral blood leukocytes.

Evidence on tissue expression from TISSUES for CXorf40A Gene

  • Nervous system(3.9)
  • Lung(3.3)
genes like me logo Genes that share expression patterns with CXorf40A: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXorf40A Gene

Orthologs for CXorf40A Gene

This gene was present in the common ancestor of chordates.

Orthologs for CXorf40A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia CXHXorf40A 34
  • 98.31 (n)
-- 35
  • 97 (a)
(Rattus norvegicus)
Mammalia RGD1562747 34
  • 81.53 (n)
(Mus musculus)
Mammalia 1110012L19Rik 34 35
  • 80.68 (n)
(Canis familiaris)
Mammalia CXHXorf40A 34
  • 80.38 (n)
-- 35
  • 78 (a)
-- 35
  • 78 (a)
(Bos Taurus)
Mammalia -- 35
  • 75 (a)
-- 35
  • 63 (a)
-- 35
  • 60 (a)
-- 35
  • 53 (a)
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 74 (a)
(Monodelphis domestica)
Mammalia -- 35
  • 68 (a)
(Gallus gallus)
Aves LOC772269 34
  • 66.45 (n)
-- 35
  • 64 (a)
(Anolis carolinensis)
Reptilia -- 35
  • 65 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia cxorf40a 34
  • 64.71 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.16160 34
(Danio rerio)
Actinopterygii zgc:110222 34
  • 56.75 (n)
C21HXorf40A 35
  • 53 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.1060 34
Species where no ortholog for CXorf40A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CXorf40A Gene

Gene Tree for CXorf40A (if available)
Gene Tree for CXorf40A (if available)

Paralogs for CXorf40A Gene

Paralogs for CXorf40A Gene

(1) SIMAP similar genes for CXorf40A Gene using alignment to 4 proteins: Pseudogenes for CXorf40A Gene

genes like me logo Genes that share paralogs with CXorf40A: view

Variants for CXorf40A Gene

Sequence variations from dbSNP and Humsavar for CXorf40A Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs10482432 -- 149,554,995(+) acctt(C/T)ttaca utr-variant-3-prime
rs11117532 -- 149,545,209(+) CAGAG(C/G)GTGGG intron-variant
rs111314546 -- 149,540,963(+) TTGCG(A/C)GCCCA intron-variant, upstream-variant-2KB
rs111737620 -- 149,555,400(+) TCTAA(C/G)TTCAC downstream-variant-500B
rs111817192 -- 149,539,255(+) GGGGG(A/T)AGACA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CXorf40A Gene

Variant ID Type Subtype PubMed ID
nsv508809 CNV insertion 20534489
nsv518742 CNV gain 19592680
nsv525908 CNV gain 19592680

Variation tolerance for CXorf40A Gene

Residual Variation Intolerance Score: 77.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.15; 3.39% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CXorf40A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CXorf40A Gene

Disorders for CXorf40A Gene

Relevant External Links for CXorf40A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CXorf40A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXorf40A Gene

Publications for CXorf40A Gene

  1. [Purification of human endothelial overexpressed lipopolysaccharide-associated factor 1 protein]. (PMID: 16383041) Cai Z. … Su Y.Y. (Zhonghua Shao Shang Za Zhi 2005) 2 3 22 64
  2. Identification and characterization of a novel gene EOLA1 stimulating ECV304 cell proliferation. (PMID: 15541360) Liang Z. … Yang Z. (Biochem. Biophys. Res. Commun. 2004) 3 4 22 64
  3. 130 kb of DNA sequence reveals two new genes and a regional duplication distal to the human iduronate-2-sulfate sulfatase locus. (PMID: 8717057) Timms K.M. … Gibbs R.A. (Genome Res. 1995) 2 3 4 64
  4. [The effect of inhibiting EOLA1 expression in ECV304 cells]. (PMID: 17557240) Liang Z.W. … Wang X.M. (Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2007) 3 22 64
  5. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4 64

Products for CXorf40A Gene

Sources for CXorf40A Gene

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