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Aliases for CXorf23 Gene

Aliases for CXorf23 Gene

  • Chromosome X Open Reading Frame 23 2 3

External Ids for CXorf23 Gene

Summaries for CXorf23 Gene

GeneCards Summary for CXorf23 Gene

CXorf23 (Chromosome X Open Reading Frame 23) is a Protein Coding gene. An important paralog of this gene is THRAP3.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXorf23 Gene

Genomics for CXorf23 Gene

Genomic Location for CXorf23 Gene

Start:
19,912,860 bp from pter
End:
19,990,926 bp from pter
Size:
78,067 bases
Orientation:
Minus strand

Genomic View for CXorf23 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CXorf23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXorf23 Gene

Regulatory Elements for CXorf23 Gene

Proteins for CXorf23 Gene

  • Protein details for CXorf23 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A2AJT9-CX023_HUMAN
    Recommended name:
    Uncharacterized protein CXorf23
    Protein Accession:
    A2AJT9
    Secondary Accessions:
    • A1A4E8
    • Q5VSM7
    • Q5VSN1
    • Q6ZS60
    • Q8N1W7

    Protein attributes for CXorf23 Gene

    Size:
    711 amino acids
    Molecular mass:
    83871 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC04399.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAC87094.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=CAH71712.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for CXorf23 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CXorf23 Gene

Proteomics data for CXorf23 Gene at MOPED

Post-translational modifications for CXorf23 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CXorf23 Gene

No data available for DME Specific Peptides for CXorf23 Gene

Domains for CXorf23 Gene

Protein Domains for CXorf23 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for CXorf23 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CXorf23: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CXorf23 Gene

Function for CXorf23 Gene

Phenotypes for CXorf23 Gene

MGI mutant phenotypes for CXorf23:
inferred from 2 alleles
GenomeRNAi human phenotypes for CXorf23:
genes like me logo Genes that share phenotypes with CXorf23: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CXorf23 Gene

Localization for CXorf23 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CXorf23 Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CXorf23 Gene COMPARTMENTS Subcellular localization image for CXorf23 gene
Compartment Confidence
mitochondrion 3
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for CXorf23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA --
genes like me logo Genes that share ontologies with CXorf23: view

Pathways for CXorf23 Gene

SuperPathways for CXorf23 Gene

No Data Available

Interacting Proteins for CXorf23 Gene

Gene Ontology (GO) - Biological Process for CXorf23 Gene

None

No data available for Pathways by source for CXorf23 Gene

Transcripts for CXorf23 Gene

Unigene Clusters for CXorf23 Gene

Chromosome X open reading frame 23:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXorf23 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10a · 10b
SP1: -
SP2:

Relevant External Links for CXorf23 Gene

GeneLoc Exon Structure for
CXorf23
ECgene alternative splicing isoforms for
CXorf23

Expression for CXorf23 Gene

mRNA expression in normal human tissues for CXorf23 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for CXorf23 Gene

SOURCE GeneReport for Unigene cluster for CXorf23 Gene Hs.28896

genes like me logo Genes that share expressions with CXorf23: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for CXorf23 Gene

Orthologs for CXorf23 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CXorf23 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CXHXorf23 35
  • 99.8 (n)
  • 99.85 (a)
CXorf23 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CXHXorf23 35
  • 84.09 (n)
  • 73.26 (a)
CXORF23 36
  • 68 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CXHXorf23 35
  • 87.27 (n)
  • 79.6 (a)
CXorf23 36
  • 70 (a)
OneToOne
mouse
(Mus musculus)
Mammalia A830080D01Rik 35
  • 78.53 (n)
  • 65.17 (a)
A830080D01Rik 16
A830080D01Rik 36
  • 54 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CXorf23 36
  • 56 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1562161 35
  • 79.81 (n)
  • 66.72 (a)
chicken
(Gallus gallus)
Aves C1HXorf23 35
  • 69.24 (n)
  • 57.12 (a)
CXorf23 36
  • 50 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia CXorf23 36
  • 44 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100490423 35
  • 55.03 (n)
  • 38.04 (a)
Species with no ortholog for CXorf23:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CXorf23 Gene

ENSEMBL:
Gene Tree for CXorf23 (if available)
TreeFam:
Gene Tree for CXorf23 (if available)

Paralogs for CXorf23 Gene

Paralogs for CXorf23 Gene

Selected SIMAP similar genes for CXorf23 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with CXorf23: view

Variants for CXorf23 Gene

Sequence variations from dbSNP and Humsavar for CXorf23 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs4255322 -- 19,984,185(+) AATCC(C/T)AAAAG intron-variant
rs4265370 -- 19,917,521(+) AATAT(C/T)GCATG intron-variant
rs4416995 -- 19,980,412(+) agtca(C/T)gaagt intron-variant
rs4459043 -- 19,980,482(+) ctgca(C/T)tcact intron-variant
rs4578149 -- 19,917,993(+) AGTAA(A/T)AACGG intron-variant

Relevant External Links for CXorf23 Gene

HapMap Linkage Disequilibrium report
CXorf23
Locus Specific Mutation Databases (LSDB)
CXorf23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CXorf23 Gene

Disorders for CXorf23 Gene

No disorders were found for CXorf23 Gene.

No data available for UniProtKB/Swiss-Prot for CXorf23 Gene

Publications for CXorf23 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. Systematic analysis of human protein complexes identifies chromosome segregation proteins. (PMID: 20360068) Hutchins J.R. … Peters J.M. (Science 2010) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4
  5. A quantitative atlas of mitotic phosphorylation. (PMID: 18669648) Dephoure N. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008) 4

Products for CXorf23 Gene

Sources for CXorf23 Gene

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