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Aliases for CXXC1P1 Gene

Aliases for CXXC1P1 Gene

  • CXXC Finger Protein 1 Pseudogene 1 2 3
  • Putative Uncharacterized Protein CXorf25 3
  • CXXC Finger 1 (PHD Domain) Pseudogene 3
  • Chromosome X Open Reading Frame 25 2
  • Non-Protein Coding RNA 236 2
  • CXXC Finger 1 Pseudogene 1 2
  • NCRNA00236 3
  • CXorf25 3

External Ids for CXXC1P1 Gene

Previous Symbols for CXXC1P1 Gene

  • CXorf25
  • NCRNA00236

Summaries for CXXC1P1 Gene

GeneCards Summary for CXXC1P1 Gene

CXXC1P1 (CXXC Finger Protein 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXXC1P1 Gene

Genomics for CXXC1P1 Gene

Genomic Location for CXXC1P1 Gene

Start:
47,707,191 bp from pter
End:
47,753,456 bp from pter
Size:
46,266 bases
Orientation:
Plus strand

Genomic View for CXXC1P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CXXC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXXC1P1 Gene

No data available for Regulatory Elements for CXXC1P1 Gene

Proteins for CXXC1P1 Gene

Post-translational modifications for CXXC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXXC1P1 Gene

Domains for CXXC1P1 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for CXXC1P1 Gene

Function for CXXC1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CXXC1P1 Gene

Localization for CXXC1P1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CXXC1P1 Gene COMPARTMENTS Subcellular localization image for CXXC1P1 gene
Compartment Confidence
mitochondrion 2
cytosol 1
extracellular 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for CXXC1P1 Gene

Pathways for CXXC1P1 Gene

SuperPathways for CXXC1P1 Gene

No Data Available

Interacting Proteins for CXXC1P1 Gene

Gene Ontology (GO) - Biological Process for CXXC1P1 Gene

None

No data available for Pathways by source for CXXC1P1 Gene

Transcripts for CXXC1P1 Gene

mRNA/cDNA for CXXC1P1 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXXC1P1 Gene

CXXC finger protein 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXXC1P1 Gene

No ASD Table

Relevant External Links for CXXC1P1 Gene

GeneLoc Exon Structure for
CXXC1P1
ECgene alternative splicing isoforms for
CXXC1P1

Expression for CXXC1P1 Gene

mRNA expression in normal human tissues for CXXC1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CXXC1P1 Gene

This gene is overexpressed in Ovary (17.4) and Testis (12.7).

SOURCE GeneReport for Unigene cluster for CXXC1P1 Gene Hs.562045

genes like me logo Genes that share expressions with CXXC1P1: view

Orthologs for CXXC1P1 Gene

Evolution for CXXC1P1 Gene

ENSEMBL:
Gene Tree for CXXC1P1 (if available)
TreeFam:
Gene Tree for CXXC1P1 (if available)

No data available for Orthologs for CXXC1P1 Gene

Paralogs for CXXC1P1 Gene

No data available for Paralogs for CXXC1P1 Gene

Variants for CXXC1P1 Gene

Sequence variations from dbSNP and Humsavar for CXXC1P1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs760579 -- 47,707,443(+) TTGCT(C/G)TCCAG intron-variant
rs995593 -- 47,709,098(+) CACTA(A/G)ACAGG intron-variant
rs1883149 -- 47,731,636(+) tataa(C/T)cccag intron-variant
rs3068153 -- 47,706,652(+) TTTTT(-/TTTTTTT)GTACA upstream-variant-2KB
rs4434741 -- 47,709,521(+) tctca(A/G)gtctt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CXXC1P1 Gene

Variant ID Type Subtype PubMed ID
nsv6888 CNV Insertion 18451855
nsv6889 CNV Insertion 18451855
esv27279 CNV Gain 19812545

Relevant External Links for CXXC1P1 Gene

HapMap Linkage Disequilibrium report
CXXC1P1
Locus Specific Mutation Databases (LSDB)
CXXC1P1

Disorders for CXXC1P1 Gene

No disorders were found for CXXC1P1 Gene.

No data available for UniProtKB/Swiss-Prot for CXXC1P1 Gene

Publications for CXXC1P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3

Products for CXXC1P1 Gene

Sources for CXXC1P1 Gene

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