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Aliases for CXXC1P1 Gene

Aliases for CXXC1P1 Gene

  • CXXC Finger Protein 1 Pseudogene 1 2 3 5
  • CXXC Finger 1 (PHD Domain) Pseudogene 3
  • Chromosome X Open Reading Frame 25 2
  • Non-Protein Coding RNA 236 2
  • CXXC Finger 1 Pseudogene 1 2
  • NCRNA00236 3
  • CXorf25 3

External Ids for CXXC1P1 Gene

Previous HGNC Symbols for CXXC1P1 Gene

  • CXorf25
  • NCRNA00236

Previous GeneCards Identifiers for CXXC1P1 Gene

  • GC0XP047561
  • GC0XP045278

Summaries for CXXC1P1 Gene

GeneCards Summary for CXXC1P1 Gene

CXXC1P1 (CXXC Finger Protein 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXXC1P1 Gene

Genomics for CXXC1P1 Gene

Regulatory Elements for CXXC1P1 Gene

Enhancers for CXXC1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG047706 0.7 ENCODE 0.7 +0.4 392 2.7 TAL1 NR2F1 ZMYM3 FOSL1 TCF12 ZNF316 POLR2A NCOR1 KLF16 SMARCA4 UXT-AS1 CXXC1P1 LOC100419053
GH0XG047696 0.9 ENCODE 0.4 -9.7 -9650 1.4 CBX3 PKNOX1 KLF17 SIN3A FEZF1 ZNF2 ZNF335 GLIS2 SCRT2 FOS SYN1 CXXC1P1 UXT
GH0XG047660 1.2 Ensembl ENCODE 0.3 -45.0 -44988 2.5 HDAC1 PKNOX1 CBX3 ATF1 ARNT NFRKB TCF12 FOS CREM JUNB UXT CXXC1P1
GH0XG047676 0.9 ENCODE 0.3 -31.1 -31075 0.1 HDAC1 TBL1XR1 ARNT TCF12 GATA2 EGR1 ZBTB2 MIER1 NCOA1 REST ELK1 UXT CXXC1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CXXC1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CXXC1P1 Gene

Chromosome:
X
Start:
47,707,191 bp from pter
End:
47,753,456 bp from pter
Size:
46,266 bases
Orientation:
Plus strand

Genomic View for CXXC1P1 Gene

Genes around CXXC1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXXC1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXXC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXXC1P1 Gene

Proteins for CXXC1P1 Gene

Post-translational modifications for CXXC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXXC1P1 Gene

Domains & Families for CXXC1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXXC1P1 Gene

Function for CXXC1P1 Gene

Phenotypes for CXXC1P1 Gene

genes like me logo Genes that share phenotypes with CXXC1P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXXC1P1 Gene

Localization for CXXC1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CXXC1P1 Gene

Pathways & Interactions for CXXC1P1 Gene

SuperPathways for CXXC1P1 Gene

No Data Available

Interacting Proteins for CXXC1P1 Gene

Gene Ontology (GO) - Biological Process for CXXC1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CXXC1P1 Gene

Drugs & Compounds for CXXC1P1 Gene

No Compound Related Data Available

Transcripts for CXXC1P1 Gene

mRNA/cDNA for CXXC1P1 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXXC1P1 Gene

CXXC finger protein 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXXC1P1 Gene

No ASD Table

Relevant External Links for CXXC1P1 Gene

GeneLoc Exon Structure for
CXXC1P1
ECgene alternative splicing isoforms for
CXXC1P1

Expression for CXXC1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CXXC1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CXXC1P1 Gene

This gene is overexpressed in Ovary (x17.4) and Testis (x12.7).

NURSA nuclear receptor signaling pathways regulating expression of CXXC1P1 Gene:

CXXC1P1

SOURCE GeneReport for Unigene cluster for CXXC1P1 Gene:

Hs.562045
genes like me logo Genes that share expression patterns with CXXC1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXXC1P1 Gene

Orthologs for CXXC1P1 Gene

Evolution for CXXC1P1 Gene

ENSEMBL:
Gene Tree for CXXC1P1 (if available)
TreeFam:
Gene Tree for CXXC1P1 (if available)

No data available for Orthologs for CXXC1P1 Gene

Paralogs for CXXC1P1 Gene

No data available for Paralogs for CXXC1P1 Gene

Variants for CXXC1P1 Gene

Sequence variations from dbSNP and Humsavar for CXXC1P1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000099439 -- 47,707,964(+) TTTAT(A/G)GTGGG intron-variant
rs1000105219 -- 47,732,972(+) AGTCT(C/T)GCTCT intron-variant
rs1000237070 -- 47,736,801(+) TTTTC(A/G)TTCAG downstream-variant-500B
rs1000269482 -- 47,724,841(+) CATGA(C/T)CTCCT intron-variant
rs1000312475 -- 47,713,802(+) ACCAA(A/C)AATAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CXXC1P1 Gene

Variant ID Type Subtype PubMed ID
esv27279 CNV gain 19812545
esv3558858 CNV deletion 23714750
nsv6888 CNV insertion 18451855
nsv6889 CNV insertion 18451855

Relevant External Links for CXXC1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CXXC1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CXXC1P1 Gene

Disorders for CXXC1P1 Gene

Relevant External Links for CXXC1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CXXC1P1

No disorders were found for CXXC1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXXC1P1 Gene

Publications for CXXC1P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 64

Products for CXXC1P1 Gene

Sources for CXXC1P1 Gene

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