Aliases for CXXC1P1 Gene
Aliases for CXXC1P1 Gene
External Ids for CXXC1P1 Gene
- HGNC: 27864
- Entrez Gene: 392459
- Ensembl: ENSG00000187893
Previous HGNC Symbols for CXXC1P1 Gene
- CXorf25
- NCRNA00236
Previous GeneCards Identifiers for CXXC1P1 Gene
- GC0XP047561
- GC0XP045278
Summaries for CXXC1P1 Gene
GeneCards Summary for CXXC1P1 Gene
CXXC1P1 (CXXC Finger Protein 1 Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXXC1P1 Gene
Genomics for CXXC1P1 Gene
Regulatory Elements for CXXC1P1 Gene
Enhancers for CXXC1P1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH0XG047706 | 0.7 | ENCODE | 0.7 | +0.4 | 392 | 2.7 | TAL1 NR2F1 ZMYM3 FOSL1 TCF12 ZNF316 POLR2A NCOR1 KLF16 SMARCA4 | UXT-AS1 CXXC1P1 LOC100419053 |
| GH0XG047660 | 1.2 | Ensembl ENCODE | 0.3 | -45.0 | -44988 | 2.5 | HDAC1 PKNOX1 CBX3 ATF1 ARNT NFRKB TCF12 FOS CREM JUNB | UXT CXXC1P1 |
| GH0XG047696 | 0.9 | ENCODE | 0.4 | -9.7 | -9650 | 1.4 | CBX3 PKNOX1 KLF17 SIN3A FEZF1 ZNF2 ZNF335 GLIS2 SCRT2 FOS | SYN1 CXXC1P1 UXT |
| GH0XG047676 | 0.9 | ENCODE | 0.3 | -31.1 | -31075 | 0.1 | HDAC1 TBL1XR1 ARNT TCF12 GATA2 EGR1 ZBTB2 MIER1 NCOA1 REST | ELK1 UXT CXXC1P1 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around CXXC1P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for CXXC1P1 Gene
- Chromosome:
- X
- Start:
- 47,707,191 bp from pter
- End:
- 47,753,456 bp from pter
- Size:
- 46,266 bases
- Orientation:
- Plus strand
Genomic View for CXXC1P1 Gene
Genes around CXXC1P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- Xp11.23 by Ensembl
- Xp11.23 by Entrez Gene
- Xp11.23 by HGNC
CXXC1P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CXXC1P1 Gene
Proteins for CXXC1P1 Gene
Post-translational modifications for CXXC1P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CXXC1P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CXXC1P1
- Origene Custom Protein Services for CXXC1P1
- Search GeneTex for Proteins for CXXC1P1
Assay Products
No data available for DME Specific Peptides for CXXC1P1 Gene
Domains & Families for CXXC1P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXXC1P1 Gene
Function for CXXC1P1 Gene
Phenotypes for CXXC1P1 Gene
- GenomeRNAi human phenotypes for CXXC1P1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CXXC1P1
-
- Search ViGene Biosciences for CXXC1P1
CRISPR Products
- Browse CRISPR knockouts for CXXC1P1
miRNA Products
- Search ViGene Biosciences for CXXC1P1
Inhibitory RNA Products
- Search ViGene Biosciences for CXXC1P1
Clone Products
- GenScript: Custom all cDNA clones Services for CXXC1P1
- VectorBuilder custom plasmid, inducible vectors for CXXC1P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CXXC1P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for CXXC1P1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXXC1P1 Gene
Localization for CXXC1P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CXXC1P1 Gene
Transcripts for CXXC1P1 Gene
mRNA/cDNA for CXXC1P1 Gene
- (2) Additional mRNA sequences :
- (5) Selected AceView cDNA sequences:
- (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for CXXC1P1 Gene
CRISPR Products
- Browse CRISPR knockouts for CXXC1P1
miRNA Products
- Search ViGene Biosciences for CXXC1P1
Inhibitory RNA Products
- Search ViGene Biosciences for CXXC1P1
Clone Products
- GenScript: Custom all cDNA clones Services for CXXC1P1
- VectorBuilder custom plasmid, inducible vectors for CXXC1P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CXXC1P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CXXC1P1 Gene
mRNA differential expression in normal tissues according to GTEx for CXXC1P1 Gene
This gene is overexpressed in Ovary (x17.4) and Testis (x12.7).
NURSA nuclear receptor signaling pathways regulating expression of CXXC1P1 Gene:
CXXC1P1SOURCE GeneReport for Unigene cluster for CXXC1P1 Gene:
Hs.562045Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXXC1P1 Gene
Orthologs for CXXC1P1 Gene
No data available for Orthologs for CXXC1P1 Gene
Paralogs for CXXC1P1 Gene
No data available for Paralogs for CXXC1P1 Gene
Variants for CXXC1P1 Gene
| SNP ID | Clin | Chr 0X pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000099439 | -- | 47,707,964(+) | TTTAT(A/G)GTGGG | intron-variant | |
| rs1000105219 | -- | 47,732,972(+) | AGTCT(C/T)GCTCT | intron-variant | |
| rs1000237070 | -- | 47,736,801(+) | TTTTC(A/G)TTCAG | downstream-variant-500B | |
| rs1000269482 | -- | 47,724,841(+) | CATGA(C/T)CTCCT | intron-variant | |
| rs1000312475 | -- | 47,713,802(+) | ACCAA(A/C)AATAG | intron-variant |
Relevant External Links for CXXC1P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CXXC1P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CXXC1P1 Gene
Disorders for CXXC1P1 Gene
Relevant External Links for CXXC1P1
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- CXXC1P1
No disorders were found for CXXC1P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXXC1P1 Gene
Publications for CXXC1P1 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 64
Products for CXXC1P1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CXXC1P1
- Origene Custom Protein Services for CXXC1P1
- Browse OriGene Inhibitory RNA Products For CXXC1P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CXXC1P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CXXC1P1
- GenScript: Custom all cDNA clones Services for CXXC1P1
- GenScript Custom Purified and Recombinant Proteins Services for CXXC1P1
- GenScript Custom Assay Services for CXXC1P1
- GenScript Custom overexpressing Cell Line Services for CXXC1P1
- Browse GenScript CRISPR for CXXC1P1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CXXC1P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for CXXC1P1
- VectorBuilder custom plasmid, inducible vectors for CXXC1P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CXXC1P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CXXC1P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer