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Aliases for CXXC1P1 Gene

Aliases for CXXC1P1 Gene

  • CXXC Finger Protein 1 Pseudogene 1 2 3 5
  • CXXC Finger 1 (PHD Domain) Pseudogene 3
  • Chromosome X Open Reading Frame 25 2
  • Non-Protein Coding RNA 236 2
  • CXXC Finger 1 Pseudogene 1 2
  • NCRNA00236 3
  • CXorf25 3

External Ids for CXXC1P1 Gene

Previous HGNC Symbols for CXXC1P1 Gene

  • CXorf25
  • NCRNA00236

Previous GeneCards Identifiers for CXXC1P1 Gene

  • GC0XP047561
  • GC0XP045278

Summaries for CXXC1P1 Gene

GeneCards Summary for CXXC1P1 Gene

CXXC1P1 (CXXC Finger Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CXXC1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXXC1P1 Gene

Genomics for CXXC1P1 Gene

Regulatory Elements for CXXC1P1 Gene

Enhancers for CXXC1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH047706 0.6 ENCODE 0.7 +0.4 392 2.7 TAL1 FOSL1 TCF12 ZNF316 NCOR1 KLF16 POLR2A MAFK EMSY UXT-AS1 CXXC1P1 LOC100419053
GH0XH047660 1.2 Ensembl ENCODE 0.3 -45.0 -44988 2.5 HDAC1 TBP PKNOX1 ATF1 ARNT NFRKB TCF12 FOS ATF7 CREM UXT CXXC1P1
GH0XH047676 0.9 ENCODE 0.3 -31.1 -31075 0.1 HDAC1 TBL1XR1 ARNT TCF12 EGR1 ATF7 ZBTB2 NCOA1 REST ZEB2 ELK1 UXT CXXC1P1
GH0XH047696 0.5 ENCODE 0.4 -9.7 -9650 1.4 ZNF680 ZNF184 ZSCAN29 SYN1 CXXC1P1 UXT
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CXXC1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CXXC1P1 Gene

Genomic Locations for CXXC1P1 Gene
46,266 bases
Plus strand

Genomic View for CXXC1P1 Gene

Genes around CXXC1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXXC1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXXC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXXC1P1 Gene

Proteins for CXXC1P1 Gene

Post-translational modifications for CXXC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXXC1P1 Gene

Domains & Families for CXXC1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXXC1P1 Gene

Function for CXXC1P1 Gene

Phenotypes for CXXC1P1 Gene

genes like me logo Genes that share phenotypes with CXXC1P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXXC1P1 Gene

Localization for CXXC1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CXXC1P1 Gene

Pathways & Interactions for CXXC1P1 Gene

SuperPathways for CXXC1P1 Gene

No Data Available

Interacting Proteins for CXXC1P1 Gene

Gene Ontology (GO) - Biological Process for CXXC1P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CXXC1P1 Gene

Drugs & Compounds for CXXC1P1 Gene

No Compound Related Data Available

Transcripts for CXXC1P1 Gene

mRNA/cDNA for CXXC1P1 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXXC1P1 Gene

CXXC finger protein 1 pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXXC1P1 Gene

No ASD Table

Relevant External Links for CXXC1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CXXC1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CXXC1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CXXC1P1 Gene

This gene is overexpressed in Ovary (x17.4) and Testis (x12.7).

NURSA nuclear receptor signaling pathways regulating expression of CXXC1P1 Gene:


SOURCE GeneReport for Unigene cluster for CXXC1P1 Gene:

genes like me logo Genes that share expression patterns with CXXC1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXXC1P1 Gene

Orthologs for CXXC1P1 Gene

Evolution for CXXC1P1 Gene

Gene Tree for CXXC1P1 (if available)
Gene Tree for CXXC1P1 (if available)

No data available for Orthologs for CXXC1P1 Gene

Paralogs for CXXC1P1 Gene

No data available for Paralogs for CXXC1P1 Gene

Variants for CXXC1P1 Gene

Sequence variations from dbSNP and Humsavar for CXXC1P1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000099439 -- 47,707,964(+) TTTAT(A/G)GTGGG intron-variant
rs1000105219 -- 47,732,972(+) AGTCT(C/T)GCTCT intron-variant
rs1000237070 -- 47,736,801(+) TTTTC(A/G)TTCAG downstream-variant-500B
rs1000269482 -- 47,724,841(+) CATGA(C/T)CTCCT intron-variant
rs1000312475 -- 47,713,802(+) ACCAA(A/C)AATAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CXXC1P1 Gene

Variant ID Type Subtype PubMed ID
nsv6889 CNV insertion 18451855
nsv6888 CNV insertion 18451855
esv3558858 CNV deletion 23714750
esv27279 CNV gain 19812545

Relevant External Links for CXXC1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CXXC1P1 Gene

Disorders for CXXC1P1 Gene

Relevant External Links for CXXC1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CXXC1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXXC1P1 Gene

Publications for CXXC1P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 2 3 60

Products for CXXC1P1 Gene

Sources for CXXC1P1 Gene

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