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Aliases for CXADRP3 Gene

Aliases for CXADRP3 Gene

  • Coxsackie Virus And Adenovirus Receptor Pseudogene 3 2 3
  • CTD-2594A10.3 3

External Ids for CXADRP3 Gene

Summaries for CXADRP3 Gene

GeneCards Summary for CXADRP3 Gene

CXADRP3 (Coxsackie Virus And Adenovirus Receptor Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXADRP3 Gene

Genomics for CXADRP3 Gene

Genomic Location for CXADRP3 Gene

Start:
14,477,952 bp from pter
End:
14,499,278 bp from pter
Size:
21,327 bases
Orientation:
Minus strand

Genomic View for CXADRP3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CXADRP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXADRP3 Gene

Regulatory Elements for CXADRP3 Gene

Proteins for CXADRP3 Gene

Post-translational modifications for CXADRP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXADRP3 Gene

Domains for CXADRP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXADRP3 Gene

Function for CXADRP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CXADRP3 Gene

Localization for CXADRP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CXADRP3 Gene

Pathways for CXADRP3 Gene

SuperPathways for CXADRP3 Gene

No Data Available

Interacting Proteins for CXADRP3 Gene

Gene Ontology (GO) - Biological Process for CXADRP3 Gene

None

No data available for Pathways by source for CXADRP3 Gene

Transcripts for CXADRP3 Gene

mRNA/cDNA for CXADRP3 Gene

(2) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXADRP3 Gene

Coxsackie virus and adenovirus receptor pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CXADRP3 Gene

No ASD Table

Relevant External Links for CXADRP3 Gene

GeneLoc Exon Structure for
CXADRP3
ECgene alternative splicing isoforms for
CXADRP3

Expression for CXADRP3 Gene

mRNA expression in normal human tissues for CXADRP3 Gene

mRNA differential expression in normal tissues according to GTEx for CXADRP3 Gene

This gene is overexpressed in Testis (48.4).

SOURCE GeneReport for Unigene cluster for CXADRP3 Gene Hs.721675

genes like me logo Genes that share expressions with CXADRP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for CXADRP3 Gene

Orthologs for CXADRP3 Gene

Evolution for CXADRP3 Gene

ENSEMBL:
Gene Tree for CXADRP3 (if available)
TreeFam:
Gene Tree for CXADRP3 (if available)

No data available for Orthologs for CXADRP3 Gene

Paralogs for CXADRP3 Gene

No data available for Paralogs for CXADRP3 Gene

Variants for CXADRP3 Gene

Sequence variations from dbSNP and Humsavar for CXADRP3 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type MAF
rs2334683 -- 14,490,407(+) GAAAT(A/C/T)ATGTG intron-variant
rs2792383 -- 14,499,827(+) ccatg(C/G)ctggc upstream-variant-2KB
rs2792384 -- 14,499,568(-) GGGCA(C/T)GATGA upstream-variant-2KB
rs2822039 -- 14,482,509(-) AATGG(A/G)TATAC intron-variant
rs2822040 -- 14,482,399(-) TATAT(A/G)GTACC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CXADRP3 Gene

Variant ID Type Subtype PubMed ID
dgv1013e1 CNV Complex 17122850
essv21603 CNV CNV 17122850
essv5519 CNV CNV 17122850
nsv909426 CNV Loss 21882294
esv22403 CNV Gain+Loss 19812545
nsv833593 CNV Gain 17160897
nsv819182 CNV Insertion 19587683
nsv9615 CNV Gain+Loss 18304495
dgv3391n71 CNV Gain 21882294
nsv514861 CNV Complex 21397061
esv2662050 CNV Deletion 23128226

Relevant External Links for CXADRP3 Gene

HapMap Linkage Disequilibrium report
CXADRP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CXADRP3 Gene

Disorders for CXADRP3 Gene

No disorders were found for CXADRP3 Gene.

No data available for UniProtKB/Swiss-Prot for CXADRP3 Gene

Publications for CXADRP3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CXADRP3 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CXADRP3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CXADRP3
    • Block miRNA regulation of CXADRP3 using miScript Target Protectors

    Sources for CXADRP3 Gene

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