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Aliases for CXADRP2 Gene

Aliases for CXADRP2 Gene

  • Coxsackie Virus And Adenovirus Receptor Pseudogene 2 2 3

External Ids for CXADRP2 Gene

Previous GeneCards Identifiers for CXADRP2 Gene

  • GC15M019271
  • GC15M022014
  • GC15M000561

Summaries for CXADRP2 Gene

GeneCards Summary for CXADRP2 Gene

CXADRP2 (Coxsackie Virus And Adenovirus Receptor Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXADRP2 Gene

Genomics for CXADRP2 Gene

Genomic Location for CXADRP2 Gene

Start:
21,371,493 bp from pter
End:
21,373,968 bp from pter
Size:
2,476 bases
Orientation:
Minus strand

Genomic View for CXADRP2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CXADRP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXADRP2 Gene

No data available for Regulatory Elements for CXADRP2 Gene

Proteins for CXADRP2 Gene

Post-translational modifications for CXADRP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXADRP2 Gene

Domains for CXADRP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXADRP2 Gene

Function for CXADRP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CXADRP2 Gene

Localization for CXADRP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CXADRP2 Gene

Pathways for CXADRP2 Gene

SuperPathways for CXADRP2 Gene

No Data Available

Interacting Proteins for CXADRP2 Gene

Gene Ontology (GO) - Biological Process for CXADRP2 Gene

None

No data available for Pathways by source for CXADRP2 Gene

Transcripts for CXADRP2 Gene

mRNA/cDNA for CXADRP2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXADRP2 Gene

Coxsackie virus and adenovirus receptor pseudogene 2:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CXADRP2

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXADRP2 Gene

No ASD Table

Relevant External Links for CXADRP2 Gene

GeneLoc Exon Structure for
CXADRP2
ECgene alternative splicing isoforms for
CXADRP2

Expression for CXADRP2 Gene

mRNA expression in normal human tissues for CXADRP2 Gene

mRNA differential expression in normal tissues according to GTEx for CXADRP2 Gene

This gene is overexpressed in Testis (50.8).

SOURCE GeneReport for Unigene cluster for CXADRP2 Gene Hs.720910

genes like me logo Genes that share expressions with CXADRP2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CXADRP2 Gene

Orthologs for CXADRP2 Gene

Evolution for CXADRP2 Gene

ENSEMBL:
Gene Tree for CXADRP2 (if available)
TreeFam:
Gene Tree for CXADRP2 (if available)

No data available for Orthologs for CXADRP2 Gene

Paralogs for CXADRP2 Gene

No data available for Paralogs for CXADRP2 Gene

Variants for CXADRP2 Gene

Sequence variations from dbSNP and Humsavar for CXADRP2 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1060424 -- 21,371,392(-) AGTGG(A/G)CTTAT downstream-variant-500B
rs1060429 -- 21,371,381(-) TGTAT(C/T)TCCCT downstream-variant-500B
rs76309249 -- 21,371,499(+) TTCTT(C/T)TTTTT nc-transcript-variant
rs76588317 -- 21,371,488(+) TTTTT(C/T)TTTCT downstream-variant-500B
rs77712742 -- 21,371,464(+) TTCTT(A/T)TCTTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for CXADRP2 Gene

Variant ID Type Subtype PubMed ID
dgv668e1 CNV Complex 17122850
dgv669e1 CNV Complex 17122850
nsv428296 CNV Gain+Loss 18775914
dgv92e55 CNV Gain 17911159
dgv93e55 CNV Gain 17911159
dgv96e55 CNV Loss 17911159
nsv9179 CNV Gain+Loss 18304495
dgv2081n71 CNV Gain 21882294
nsv7260 OTHER Inversion 18451855
nsv821678 CNV Loss 15273396
dgv678e1 CNV Complex 17122850
dgv679e1 CNV Complex 17122850
esv33051 CNV Gain+Loss 17666407
nsv819770 CNV Gain 19587683
dgv1n1 OTHER Inversion 15895083
esv1004259 OTHER Inversion 20482838
dgv44n16 CNV Insertion 17901297
dgv2108n71 CNV Gain 21882294
dgv2109n71 CNV Gain+Loss 21882294
dgv2110n71 CNV Gain 21882294
dgv684e1 CNV Complex 17122850
esv2751489 CNV Gain 17911159
dgv686e1 CNV Complex 17122850
esv2749365 CNV Deletion 23290073
dgv97e55 CNV Loss 17911159
nsv902947 CNV Loss 21882294
dgv98e55 CNV Gain 17911159
esv34233 CNV Loss 17911159
dgv2148n71 CNV Gain 21882294
dgv2158n71 CNV Gain 21882294
nsv817667 CNV Gain 17921354
dgv2168n71 CNV Gain 21882294
dgv691e1 CNV Complex 17122850
dgv2172n71 CNV Loss 21882294
essv13315 CNV CNV 17122850
esv2751492 CNV Gain 17911159
dgv2175n71 CNV Gain 21882294
dgv2183n71 CNV Gain 21882294

Relevant External Links for CXADRP2 Gene

HapMap Linkage Disequilibrium report
CXADRP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CXADRP2 Gene

Disorders for CXADRP2 Gene

No disorders were found for CXADRP2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CXADRP2 Gene

Publications for CXADRP2 Gene

No publications were found for CXADRP2 Gene.

Products for CXADRP2 Gene

Sources for CXADRP2 Gene

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