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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

CXADR Gene

protein-coding GIFtS: 63
GCID: GC21P018884

coxsackie virus and adenovirus receptor

Explore 76 diseases affiliated with
CXADR via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, ¹⁰fRNAdb, and/or ¹¹Nature:405,311-319 and CroW21)
About This Section

Aliases
Coxsackie Virus And Adenovirus Receptor¹ ²		CVB3-Binding Protein² ³
CAR¹ ² ³ ⁵		CAR4/6²
46 KD Coxsackievirus And Adenovirus Receptor (CAR) Protein² 11		HCAR²
Coxsackievirus B-Adenovirus Receptor² ³		Coxsackievirus And Adenovirus Receptor²
HCVADR² ³		HCAR²

External Ids:	HGNC: 2559¹	Entrez Gene: 1525²	Ensembl: ENSG00000154639⁷	OMIM: 602621⁵	UniProtKB: P78310³

Export aliases for CXADR gene to outside databases

Previous GC identifers: GC21P015549 GC21P017807 GC21P004271

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CXADR:

The protein encoded by this gene is a type I membrane receptor for group B coxsackieviruses and subgroup C

adenoviruses. Several transcript variants encoding different isoforms have been found for this gene. Pseudogenes of

this gene are found on chromosomes 15, 18, and 21. (provided by RefSeq, May 2011)

UniProtKB/Swiss-Prot: CXAR_HUMAN, P78310

Function: Component of the epithelial apical junction complex that is essential for the tight junction integrity.

Proposed to function as a homophilic cell adhesion molecule. Recruits MPDZ to intercellular contact sites. Probably

involved in transepithelial migration of polymorphonuclear leukocytes (PMN) through adhesive interactions with

AMICA1/JAML located in the plasma membrane of PMN

Gene Wiki entry for CXADR (Coxsackie virus and adenovirus receptor)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics, Whole Chromsome Sequence According to Nature (Cited Here with Permission):405,311-319 and CroW21)
About This Section

RefSeq DNA sequence:

NC_000021.8 NC_018932.1 NT_011512.11

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the CXADR gene promoter:
c-Fos AP-1 JunB Fra-1 FosB LCR-F1 JunD FOXJ2 (long isoform) FOXJ2 c-Jun
Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: CXADR promoter sequence

Search SABiosciences Chromatin IP Primers for CXADR

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CXADR

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 21q21.1 Ensembl cytogenetic band: 21q21.1 HGNC cytogenetic band: 21q21.1
Nature(405: 311-319) cytogenetic band: 21q21.1

CXADR Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CXADR gene location

GeneLoc information about chromosome 21 GeneLoc Exon Structure

(about GC identifiers)

GC21P018884:	GeneLoc	Nature:405,311-319
Start:	18,884,700 bp from pter	4,549,799 bp from centromere
End:	18,965,897 bp from pter	4,603,690 bp from centromere
Size:	81,198 bases	53,892 bases
Orientation:	plus strand	plus strand

Whole chromosome sequencing:
cDNA sequence:	U90716 Y07593
genomic clones:	R827P19 R877L16

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CXAR_HUMAN, P78310 (See protein sequence)

Recommended Name: Coxsackievirus and adenovirus receptor precursor

Size: 365 amino acids; 40030 Da

Subunit: Monomer. Probably homodimer formed by 2 molecules on adjacent cells. Interacts with LNX, MPDZ, BAIAP1, DLG4,

PRKCABP, TJP1 and CTNNB1. Secreted isoform 3, isoform 4 and isoform 5 can interact with the extracellular domain of

the receptor. Interacts with adenovirus subgroups A, C, D, E and F fiber proteins as well as coxsackievirus B1, B2,

B3, B4, B5 and B6 capsid proteins and acts as a receptor for these viruses

Subcellular location: Isoform 1: Cell membrane; Single-pass type I membrane protein. Cell junction, tight junction.

Cell junction, adherens junction. Basolateral cell membrane; Single-pass type I membrane protein. Note=In epithelial

cells localizes to the apical junction complex composced of tight and adherens junctions. In airway epithelial cells

localized to basolateral membrane but not to apical surface

Subcellular location: Isoform 2: Cell membrane; Single-pass type I membrane protein. Cell junction, tight junction.

Cell junction, adherens junction. Basolateral cell membrane; Single-pass membrane protein. Note=In epithelial cells

localizes to the apical junction complex composced of tight and adherens junctions. In airway epithelial cells

localized to basolateral membrane but not to apical surface

Subcellular location: Isoform 3: Secreted

Subcellular location: Isoform 4: Secreted

Subcellular location: Isoform 5: Secreted

6/12 PDB 3D structures from and Proteopedia for CXADR (see all 12):

1EAJ (3D)

1F5W (3D)

1JEW (3D)

1KAC (3D)

1P69 (3D)

1P6A (3D)

Secondary accessions: B2R8V8 O00694 Q8WWT6 Q8WWT7 Q8WWT8 Q9UKV4

Alternative splicing: 5 isoforms: P78310-1 P78310-2 P78310-3 P78310-4 P78310-5 (Ref.12 (AAD31772) sequence is in conflict in position: 343:P->A)

Explore the universe of human proteins at neXtProt for CXADR: NX_P78310

Post-translational modifications:

N-glycosylated (By similarity)¹

Palmitoylated on Cys-259 and/or Cys-260; required for proper localization to the plasma membrane¹

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_P78310

CXADR Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins (5 alternative transcripts):

NP_001193992.1 NP_001193993.1 NP_001193994.1 NP_001193995.1 NP_001329.1

ENSEMBL proteins:

ENSP00000284878 ENSP00000383030 ENSP00000348620 ENSP00000383033 ENSP00000383029

ENSP00000303395

Reactome Protein details: P78310
Human Recombinant Protein Products for CXADR:

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	Sino Biological Recombinant Protein for CXADR
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	Uscn Proteins for CXADR

Gene Ontology (GO): 5/22 cellular component terms (GO ID links to tree view) (see all 22): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0001669	acrosomal vesicle	ISS	--
GO:0005576	extracellular region	IEA	--
GO:0005615	extracellular space	IDA	14978041
GO:0005634	nucleus	IDA	--
GO:0005730	NOT nucleolus	IDA	--

CXADR for ontologies About GeneDecksing

CXADR Antibody Products:

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	Novus Biologicals CXADR Antibodies
	Abcam antibodies for CXADR
	Uscn Antibodies for CXADR
	ThermoFisher Antibodies for CXADR

Assay Products for CXADR:

	Browse Kits and Assays available from EMD Millipore
	OriGene Custom Immunoassay Development Browse OriGene Fluorogenic Cell Assay Kits
	Browse R&D Systems for biochemical assays
	GenScript Custom Assay Services for CXADR
	Browse Enzo Life Sciences for kits & assays
	Uscn ELISAs and CLIAs for CXADR

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

CXADR for domains About GeneDecksing

5 InterPro domains/families:

IPR003598 Ig_sub2

IPR013783 Ig-like_fold

IPR013106 Ig_V-set

IPR007110 Ig-like_dom

IPR003599 Ig_sub

Graphical View of Domain Structure for InterPro Entry P78310

ProtoNet protein and cluster: P78310

2 Blocks protein families:

IPB003598 Immunoglobulin C-2 type

IPB013106 Immunoglobulin V-set

UniProtKB/Swiss-Prot: CXAR_HUMAN, P78310

Domain: The Ig-like C2-type 1 domain probably mediates homodimerization and interaction with JAML

Domain: The PDZ-binding motif mediates interaction with MPDZ and BAIAP1

Similarity: Contains 2 Ig-like C2-type (immunoglobulin-like) domains

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Molecular Function:

UniProtKB/Swiss-Prot Summary: CXAR_HUMAN, P78310

Function: Component of the epithelial apical junction complex that is essential for the tight junction integrity.

Proposed to function as a homophilic cell adhesion molecule. Recruits MPDZ to intercellular contact sites. Probably

involved in transepithelial migration of polymorphonuclear leukocytes (PMN) through adhesive interactions with

AMICA1/JAML located in the plasma membrane of PMN

Genatlas biochemistry entry for CXADR:

coxsackie B and adenovirus (group C) common receptor

Gene Ontology (GO): 5/8 molecular function terms (GO ID links to tree view) (see all 8): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0004872	receptor activity	--	--
GO:0005102	receptor binding	IPI	14978041
GO:0005515	protein binding	IPI	11734628
GO:0008013	beta-catenin binding	IPI	12297051
GO:0030165	PDZ domain binding	IPI	15364909

CXADR for ontologies About GeneDecksing

Phenotypes:
12 MGI mutant phenotypes (inferred from 8 alleles) (MGI details for Cxadr):

behavior/neurological	cardiovascular system	cellular	digestive/alimentary	embryogenesis
endocrine/exocrine gland	hematopoietic system	homeostasis/metabolism	immune system	mortality/aging
muscle	respiratory system

CXADR for phenotypes About GeneDecksing

Animal Models:
Mouse knock-outs for CXADR: Cxadr^tm2Know Cxadr^tm1.1Mds Cxadr^tm1Dvst Cxadr^tm1Rwf

inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for CXADR

miRNA Products:		OriGene 3'-UTR Clone: CXADR Browse MicroRNA Expression Plasmids
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CXADR
		8/102 QIAGEN miScript miRNA Assays for microRNAs that regulate CXADR (see all 102):
		hsa-miR-411* hsa-miR-607 hsa-miR-199a-3p hsa-miR-200a hsa-miR-128 hsa-miR-374a hsa-miR-3653 hsa-miR-10b*

		SwitchGear 3'UTR luciferase reporter plasmid: CXADR 3' UTR sequence

Inhib. RNA Products:		Browse for Gene Knock-down Tools from EMD Millipore
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In Situ Assay
Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CXADR

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways About this table

See pathways by source

Super-pathway

contained gene-specific pathways

Immune System

Immune System

1.00

Adaptive Immune System

0.59

Cell surface interactions at the vascular wall

Cell surface interactions at the vascular wall

1.00

Platelet activation, signaling and aggregation

Hemostasis

0.43

Allograft rejection

Viral myocarditis

0.33

Cleavage of Alpha-1-Microglobulin

Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell

0.30

Pathway sources
See GeneCards unified pathways
Show all pathways

5 Reactome Pathways for CXADR

	Hemostasis
	Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
	Adaptive Immune System
	Cell surface interactions at the vascular wall
	Immune System

1 Kegg Pathway (Kegg details for CXADR):

Viral myocarditis

CXADR for pathways About GeneDecksing

Interactions:

SABiosciences Gene Network Central^TM Interacting Genes and Proteins Network for CXADR

STRING Interaction Network Preview (showing 5 interactants - click image to see more details)

5/11 Interacting proteins for CXADR (P78310^{2, 3} ENSP00000284878⁴) via UniProtKB, MINT, STRING, and/or I2D (see all 11)

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
LNX1	Q8TBB1³, ENSP00000263925⁴	I2D: score=2 STRING: ENSP00000263925
EWSR1	Q01844³, ENSP00000381031⁴	I2D: score=3 STRING: ENSP00000381031
ACTB	P60709³	I2D: score=1
TRAPPC6A	O75865³	I2D: score=1
AMICA1	ENSP00000348635⁴	STRING: ENSP00000348635

About this table

Gene Ontology (GO): 5/21 biological process terms (GO ID links to tree view) (see all 21): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0007005	mitochondrion organization	ISS	--
GO:0007157	heterophilic cell-cell adhesion	IDA	15800062
GO:0007507	heart development	ISS	--
GO:0007596	blood coagulation	TAS	--
GO:0008354	germ cell migration	ISS	--

CXADR for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

CXADR for compounds About GeneDecksing

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for CXADR
10/46 Novoseek chemical compound relationships for CXADR gene (see all 46) About this table

Compound	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
penton	86.4	9	15483666 (2), 12923563 (1), 15684699 (1), 11884569 (1) (see all 7)
androstane	83.6	9	19196842 (1), 14567971 (1), 12695351 (1), 14978227 (1) (see all 8)
citco	82.7	14	15802384 (1), 17585873 (1), 18492798 (1), 19925382 (1)
cinacalcet	69.5	13	16816924 (2), 18561096 (2), 19765257 (2), 15631545 (1)
depsipeptide	68	45	16356494 (4), 16951199 (3), 14614025 (2), 17308048 (2) (see all 9)
ad 11	67.5	1	12915534 (1)
hexon	58.2	2	15671566 (1), 16956941 (1)
tcpobop	57.7	2	15802384 (1), 19925382 (1)
calcium	51	230	15525493 (5), 7835282 (4), 20130845 (4), 9722568 (4) (see all 91)
spermine	43.8	11	17041782 (2), 8694826 (1), 9677383 (1), 11108243 (1) (see all 8)

Search CenterWatch for drugs/clinical trials and news about CXADR / CXAR

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for CXADR gene (5 alternative transcripts):

NM_001207063.1 NM_001207064.1 NM_001207065.1 NM_001207066.1 NM_001338.4

Unigene Cluster for CXADR:

Coxsackie virus and adenovirus receptor

Hs.627078 [show with all ESTs]

Unigene Representative Sequence: NM_001338

6 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000284878(uc002yki.3 uc002ykh.2 uc010gld.2 uc010gle.2 uc021whp.1)

ENST00000400166 ENST00000356275 ENST00000400169(uc002ykj.2) ENST00000400165

ENST00000306618

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		hsa-miR-411* hsa-miR-607 hsa-miR-199a-3p hsa-miR-200a hsa-miR-128 hsa-miR-374a hsa-miR-3653 hsa-miR-10b*

		SwitchGear 3'UTR luciferase reporter plasmid: CXADR 3' UTR sequence

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Additional cDNA sequence:

AF124598.1 AK313526.1 AY072910.1 AY072911.1 AY072912.1 BC003684.1 BC010536.1 BT019876.1

GU474812.1 U90716.1 Y07593.1

11 DOTS entries:

DT.95369288 DT.212280 DT.100778374 DT.100778367 DT.100757082 DT.315373 DT.100638716 DT.100814204

DT.121279063 DT.95369281 DT.75171993

24/152 AceView cDNA sequences (see all 152):

AW628404 BC010536 NM_001338 AI214281 AI290221 BP372920 AA954469 AI369746

AA666170 AI066454 BF062895 AI336853 AL521066 AI394410 Y07593 CR617256

AW265156 BI754365 AA128200 AI686754 AA128199 AA176652 AI538104 AA176808

GeneLoc Exon Structure

5 Alternative Splicing Database (ASD) splice patterns (SP) for CXADR About this scheme

ExUns:	1	^	2a	·	2b	·	2c	^	3a	·	3b	^	4	^	5a	·	5b	^	6	^	7	^	8a	·	8b	·	8c
SP1:											-
SP2:											-								-		-
SP3:											-				-		-		-		-
SP4:			-		-		-				-
SP5:

ECgene alternative splicing isoforms for CXADR

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

CXADR expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TCTCTGTGTA

About this image

CXADR expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine About this table

8 LifeMap In Vivo Development Anatomical Compartments/Cells

Tissue

Anatomical Compartment

Cell

Category (developmental path)

Gut Tube

Midgut

Midgut Endoderm Cells

Endoderm

Adipose

Interscapular Brown Adipose Depot

Adipose

Brain

Brain

Eye

Gut Tube

Neural Tube

Neural Tube

Expression:

Positive

Negative

Selective marker

Experimental details:

Curated

Microarrays

In-situ hybridization

Stem Cell Differentiation: 3 LifeMap Cells

Name

Category

PureStem™ mesenchymal progenitor MEL2 (Embryonic Progenitor Cell)

Adipose, Bone, Cartilage

PureStem™ progenitor RASMO12 (Embryonic Progenitor Cell)

HyStem+BMP4-induced MEL2 cells (HyStem+BMP4 inductio...)

Bone

See CXADR Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for CXADR

SOURCE GeneReport for Unigene cluster: Hs.627078

UniProtKB/Swiss-Prot: CXAR_HUMAN, P78310

Tissue specificity: Expressed in pancreas, brain, heart, small intestine, testis, prostate and at a lower level in

liver and lung. Isoform 5 is ubiquitously expressed. Isoform 3 is expressed in heart, lung and pancreas. In skeletal

muscle, isoform 1 is found at the neuromuscular junction and isoform 2 is found in blood vessels. In cardiac muscle,

isoform 1 and isoform 2 are found at intercalated disks. In heart expressed in subendothelial layers of the vessel

wall but not in the luminal endothelial surface. Expression is elevated in hearts with dilated cardiomyopathy

SABiosciences Custom PCR Arrays for CXADR

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		QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CXADR

In Situ
Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CXADR

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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This gene was present in the common ancestor of chordates.

Orthologs for CXADR gene from 4/12 species (see all 12) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
chicken (Gallus gallus)	Aves	CXADR¹	coxsackie virus and adenovirus receptor	65.78(n) 59.35(a)		418473 XM_416681.3 XP_416681.3
lizard (Anolis carolinensis)	Reptilia	CXADR⁶	--	56(a)	1 ↔ 1	3(153730920-153741517)
tropical clawed frog (Xenopus tropicalis)	Amphibia	Str.2704²	Transcribed sequence with weak similarity to protein more	77.71(n)		AL956823.2
zebrafish (Danio rerio)	Actinopterygii	cxadr²	coxsackie virus and adenovirus receptor	73.3(n)		259305 BC045286.1

ENSEMBL Gene Tree for CXADR (if available)
TreeFam Gene Tree for CXADR (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
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Paralogs for CXADR gene

CLMP² ESAM² VSIG8² GPA33² JAM2² VSIG1² VSIG2² C1orf204²

IGSF11² JAM3² F11R²

3 SIMAP similar genes for CXADR using alignment to 3 protein entries: CXAR_HUMAN (see all proteins):

GPA33 IGSF11 CLMP

CXADR for paralogs About GeneDecksing

4 Pseudogenes.org Pseudogenes for CXADR
PGOHUM00000246625 PGOHUM00000246637 PGOHUM00000234879 PGOHUM00000258119

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
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SNP ID	Valid	Clinical significance	Chr 21 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs76106553^1,2	C,F	--	18883459(+)	`TGTTGT/CCTTAC`	5	--	us2k¹		1		WA	118
rs144790622^1,2		--	18883556(+)	`ACTACC/TACTGG`	5	--	us2k¹		0	--	--	--	--
rs9647196^1,2	C,H	--	18883602(+)	`TTCCCC/TTTAAA`	5	--	us2k¹		4		NS EA	418
rs79080050^1,2		--	18883622(+)	`ATTGGA/CATCAC`	5	--	us2k¹		2		CSA WA	120
rs61694644^1,2	C	--	18883661(+)	`TATAC-/ATATA TAGAT`	5	--	us2k¹		0	--	--	--	--
rs201231587^1,2		--	18883686(+)	`TAGAT-/AGATATT`	5	--	us2k¹		0	--	--	--	--
rs71654606^1,2	C	--	18883690(+)	`ATATA-/TTTTTTT`	5	--	us2k¹		1		CSA	2
rs13049633^1,2	C,F	--	18884042(+)	`ATTGCA/GACTCA`	5	--	us2k¹		6		WA NA CSA EA	364
rs75908521^1,2		--	18884108(+)	`CCCTTC/TTCTTT`	5	--	us2k¹		0	--	--	--	--
rs193239818^1,2		--	18884131(+)	`CATAAC/TAAGAA`	5	--	us2k¹		0	--	--	--	--

HapMap Linkage Disequilibrium report for CXADR (18884700 - 18965897 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for CXADR: --

SABiosciences Cancer Mutation PCR Assays

QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CXADR

DNA2.0 Custom Variant and Variant Library Synthesis for CXADR

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

CXADR for disorders           About GeneDecksing

OMIM gene information: 602621    OMIM disorders: --

20/76 diseases for CXADR (see all 76):    About MalaCards

hypocalcemia, autosomal dominant hypocalciuric hypercalcemia familial hypocalciuric hypercalcemia hypocalcemia

anaplastic large cell lymphoma parathyroid adenoma hypercalcemia bladder transitional cell carcinoma

hyperparathyroidism transitional cell carcinoma dilated cardiomyopathy barrett's esophagus

hypoparathyroidism short stature ventricular fibrillation myocardial infarction

secondary hyperparathyroidism malignant glioma acute myocardial infarction osteolysis

1 disease from the University of Copenhagen DISEASES database for CXADR:

Myocarditis

10/79 Novoseek disease relationships for CXADR gene (see all 79) About this table

Disease	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
adenovirus infections	84.2	23	11972385 (2), 11207218 (2), 11522619 (1), 14614025 (1) (see all 19)
nshpt	74.1	7	7717399 (2), 16509534 (2), 7593455 (1), 9769711 (1)
coxsackie virus	66.9	8	16014330 (2), 12753648 (1), 12923563 (1), 14978758 (1) (see all 7)
hyperparathyroidism secondary	57.4	3	15466262 (1), 16816924 (1), 19303957 (1)
hypocalcemia, autosomal dominant	57	3	9769711 (2), 15591042 (1)
epidemic keratoconjunctivitis	55	1	12429514 (1)
hypercalcemia	54.7	16	12970167 (2), 9769711 (2), 8636323 (1), 11323743 (1) (see all 11)
swine vesicular disease	52.8	2	10814575 (2)
parathyroid adenoma	48	9	10024390 (2), 7759551 (2), 9854589 (1), 10352095 (1) (see all 7)
urogenital cancer	45.5	6	14695181 (4)

Human Genome Epidemiology (HuGE) Navigator: CXADR (4 documents)

Export disorders for CXADR gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
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PubMed articles for CXADR gene, integrated from 9 sources (see all 450):
(articles sorted by number of sources associating them with CXADR)

Utopia: connect your pdf to the dynamic
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Isolation of a common receptor for Coxsackie B viruses and adenoviruses 2 and 5. (PubMed id 9036860)^{1, 2, 3} Bergelson J.M.... Finberg R.W. (1997)
HCAR and MCAR: the human and mouse cellular receptors for subgroup C adenoviruses and group B coxsackieviruses. (PubMed id 9096397)^{1, 2, 3} Tomko R.P.... Philipson L. (1997)
Human coxsackie-adenovirus receptor is colocalized with integrins alpha(v)beta(3) and alpha(v)beta(5) on the cardiomyocyte sarcolemma and upregulated in dilated cardiomyopathy: implications for cardiotropic viral infections. (PubMed id 11457744)^{1, 2, 9} Noutsias M.... Poller W. (2001)
Isoform-specific expression of the Coxsackie and adenovirus receptor (CAR) in neuromuscular junction and cardiac intercalated discs. (PubMed id 15533241)^{1, 2, 9} Shaw C.A.... Nalbantoglu J. (2004)
Alternatively spliced soluble coxsackie-adenovirus receptors inhibit coxsackievirus infection. (PubMed id 14978041)^{1, 2, 9} Doerner A.... Knowlton K.U. (2004)
A role for the PDZ-binding domain of the coxsackie B virus and adenovirus receptor (CAR) in cell adhesion and growth. (PubMed id 15304526)^{1, 2, 9} Ashbourne-Excoffon K.J.D....Zabner J. (2004)
The coxsackievirus and adenovirus receptor is a transmembrane component of the tight junction. (PubMed id 11734628)^{1, 2, 9} Cohen C.J....Bergelson J.M. (2001)
Fatty acid modification of the coxsackievirus and adenovirus receptor. (PubMed id 12021372)^{1, 2, 9} van't Hof W. and Crystal R.G. (2002)
Expression of Coxsackie-adenovirus-receptor and alpha v-integrin does not correlate with adenovector targeting in vivo indicating anatomical vector barriers. (PubMed id 10490761)^{1, 2, 9} Fechner H.... Poller W. (1999)
Neutrophil migration across tight junctions is mediated by adhesive interactions between epithelial CAR and a JAM-like protein on neutrophils. (PubMed id 15800062)^{1, 2} Zen K....Parkos C.A. (2005)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
Disorders
Free Text

Query String		PubMed OMIM NCBI Bookshelf
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(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 1525	HGNC: 2559	AceView: CXADR	Ensembl:ENSG00000154639	euGenes: HUgn1525
ECgene: CXADR	Kegg: 1525	H-InvDB: CXADR

(According to HUGE)
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(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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Name	Description
PharmGKB entry for CXADR	Pharmacogenomics, SNPs, Pathways

Intellectual Property for CXADR gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

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Patent Information for CXADR gene:
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GeneCards and IP:
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coxsackie virus and adenovirus receptor

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CXADR Gene

coxsackie virus and adenovirus receptor

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