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Aliases for CUBNP1 Gene

Aliases for CUBNP1 Gene

  • Cubilin Pseudogene 1 2 3 5
  • Cubilin (Intrinsic Factor-Cobalamin Receptor) Pseudogene 1 2

External Ids for CUBNP1 Gene

Previous GeneCards Identifiers for CUBNP1 Gene

  • GC10M043191

Summaries for CUBNP1 Gene

GeneCards Summary for CUBNP1 Gene

CUBNP1 (Cubilin Pseudogene 1) is a Pseudogene.

Additional gene information for CUBNP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CUBNP1 Gene

Genomics for CUBNP1 Gene

Regulatory Elements for CUBNP1 Gene

Enhancers for CUBNP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H043451 1.6 FANTOM5 ENCODE 14.6 -739.8 -739831 5 HDGF FOXA2 PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 LOC105378272 ENSG00000228426 LOC102724264 LOC105378277 ENSG00000227029 LINC00841 LINC01264 LOC107984178 CUBNP1 RSU1P1
GH10H042781 1.2 ENCODE 14.8 -68.2 -68185 2 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 NFYC ZC3H11A ZFP41 BMS1 ZNF32-AS2 HNRNPF ENSG00000273008 EIF3LP2 ZNF32-AS1 ZNF37BP ZNF239 ZNF32 RSU1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CUBNP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CUBNP1 Gene

Chromosome:
10
Start:
42,694,371 bp from pter
End:
42,714,576 bp from pter
Size:
20,206 bases
Orientation:
Minus strand

Genomic View for CUBNP1 Gene

Genes around CUBNP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CUBNP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CUBNP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CUBNP1 Gene

Proteins for CUBNP1 Gene

Post-translational modifications for CUBNP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CUBNP1 Gene

Domains & Families for CUBNP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CUBNP1 Gene

Function for CUBNP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CUBNP1 Gene

Localization for CUBNP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CUBNP1 Gene

Pathways & Interactions for CUBNP1 Gene

SuperPathways for CUBNP1 Gene

No Data Available

Interacting Proteins for CUBNP1 Gene

Gene Ontology (GO) - Biological Process for CUBNP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CUBNP1 Gene

Drugs & Compounds for CUBNP1 Gene

No Compound Related Data Available

Transcripts for CUBNP1 Gene

mRNA/cDNA for CUBNP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CUBNP1 Gene

No ASD Table

Relevant External Links for CUBNP1 Gene

GeneLoc Exon Structure for
CUBNP1
ECgene alternative splicing isoforms for
CUBNP1

Expression for CUBNP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CUBNP1 Gene

mRNA differential expression in normal tissues according to GTEx for CUBNP1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of CUBNP1 Gene:

CUBNP1
genes like me logo Genes that share expression patterns with CUBNP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CUBNP1 Gene

Orthologs for CUBNP1 Gene

Evolution for CUBNP1 Gene

ENSEMBL:
Gene Tree for CUBNP1 (if available)
TreeFam:
Gene Tree for CUBNP1 (if available)

No data available for Orthologs for CUBNP1 Gene

Paralogs for CUBNP1 Gene

No data available for Paralogs for CUBNP1 Gene

Variants for CUBNP1 Gene

Relevant External Links for CUBNP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CUBNP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CUBNP1 Gene

Disorders for CUBNP1 Gene

No disorders were found for CUBNP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CUBNP1 Gene

Publications for CUBNP1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for CUBNP1 Gene

Sources for CUBNP1 Gene

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