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Aliases for CTSL3P Gene

Aliases for CTSL3P Gene

  • Cathepsin L Family Member 3, Pseudogene 2 3 5
  • HCTSL-S 3 4
  • CTSL3 3 4
  • Cathepsin L Family Member 3 2
  • Cathepsin L-Like Protein 3
  • Cathepsin L3 Pseudogene 4
  • EC 3.4.22 63

External Ids for CTSL3P Gene

Previous HGNC Symbols for CTSL3P Gene

  • CTSL3

Previous GeneCards Identifiers for CTSL3P Gene

  • GC09P090390

Summaries for CTSL3P Gene

GeneCards Summary for CTSL3P Gene

CTSL3P (Cathepsin L Family Member 3, Pseudogene) is a Pseudogene. GO annotations related to this gene include cysteine-type peptidase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTSL3P Gene

Genomics for CTSL3P Gene

Genomic Location for CTSL3P Gene

Chromosome:
9
Start:
87,772,453 bp from pter
End:
87,786,884 bp from pter
Size:
14,432 bases
Orientation:
Plus strand

Genomic View for CTSL3P Gene

Genes around CTSL3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTSL3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTSL3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTSL3P Gene

No data available for Regulatory Elements for CTSL3P Gene

Proteins for CTSL3P Gene

  • Protein details for CTSL3P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5NE16-CATL3_HUMAN
    Recommended name:
    Putative inactive cathepsin L-like protein CTSL3P
    Protein Accession:
    Q5NE16

    Protein attributes for CTSL3P Gene

    Size:
    218 amino acids
    Molecular mass:
    25059 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CTSL3P Gene

Proteomics data for CTSL3P Gene at MOPED

Selected DME Specific Peptides for CTSL3P Gene

Post-translational modifications for CTSL3P Gene

No Post-translational modifications

Domains & Families for CTSL3P Gene

Protein Domains for CTSL3P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for CTSL3P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5NE16

UniProtKB/Swiss-Prot:

CATL3_HUMAN :
  • Belongs to the peptidase C1 family.
Family:
  • Belongs to the peptidase C1 family.
genes like me logo Genes that share domains with CTSL3P: view

No data available for Gene Families for CTSL3P Gene

Function for CTSL3P Gene

Enzyme Numbers (IUBMB) for CTSL3P Gene

Phenotypes for CTSL3P Gene

GenomeRNAi human phenotypes for CTSL3P:
genes like me logo Genes that share phenotypes with CTSL3P: view

No data available for Molecular function , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTSL3P Gene

Localization for CTSL3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CTSL3P Gene

Pathways & Interactions for CTSL3P Gene

SuperPathways for CTSL3P Gene

No Data Available

Interacting Proteins for CTSL3P Gene

Gene Ontology (GO) - Biological Process for CTSL3P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CTSL3P Gene

Drugs & Compounds for CTSL3P Gene

No Compound Related Data Available

Transcripts for CTSL3P Gene

mRNA/cDNA for CTSL3P Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(688) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CTSL3P Gene

Cathepsin L family member 3, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CTSL3P Gene

No ASD Table

Relevant External Links for CTSL3P Gene

GeneLoc Exon Structure for
CTSL3P
ECgene alternative splicing isoforms for
CTSL3P

Expression for CTSL3P Gene

mRNA expression in normal human tissues for CTSL3P Gene

mRNA differential expression in normal tissues according to GTEx for CTSL3P Gene

This gene is overexpressed in Kidney - Cortex (x43.2) and Heart - Atrial Appendage (x6.6).

SOURCE GeneReport for Unigene cluster for CTSL3P Gene Hs.690450

genes like me logo Genes that share expression patterns with CTSL3P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CTSL3P Gene

Orthologs for CTSL3P Gene

Evolution for CTSL3P Gene

ENSEMBL:
Gene Tree for CTSL3P (if available)
TreeFam:
Gene Tree for CTSL3P (if available)

No data available for Orthologs for CTSL3P Gene

Paralogs for CTSL3P Gene

(2) SIMAP similar genes for CTSL3P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CTSL3P: view

No data available for Paralogs for CTSL3P Gene

Variants for CTSL3P Gene

Sequence variations from dbSNP and Humsavar for CTSL3P Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs11141967 - 87,773,586(+) CTTCC(A/G)GTATG nc-transcript-variant
rs718295 -- 87,783,958(-) TGCAT(G/T)CCAGC intron-variant
rs1328577 -- 87,781,896(-) CCAAA(A/G)AAGTA intron-variant
rs1887790 -- 87,777,537(+) TTTCA(C/T)GTGGA intron-variant
rs1887791 -- 87,777,768(+) AGAAT(C/T)GGTGT intron-variant

Relevant External Links for CTSL3P Gene

HapMap Linkage Disequilibrium report
CTSL3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTSL3P Gene

Disorders for CTSL3P Gene

Relevant External Links for CTSL3P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CTSL3P

No disorders were found for CTSL3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTSL3P Gene

Publications for CTSL3P Gene

  1. CA/C1 peptidases of the malaria parasites Plasmodium falciparum and P. berghei and their mammalian hosts--a bioinformatical analysis. (PMID: 19663681) Xiao K. … Dandekar T. (Biol. Chem. 2009) 2 3 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Characterization of a cDNA encoding a cathepsin L-like protein of Rhodnius prolixus. (PMID: 11881815) Lopez-OrdoA+ez T. … HernA!ndez-HernA!ndez F.D. (Insect Mol. Biol. 2001) 23

Products for CTSL3P Gene

Sources for CTSL3P Gene

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