CTSB Gene
protein-coding GIFtS : 73
GCID: GC08 M011700
cathepsin B
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Aliasesfor CTSB gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Cathepsin B 1 2 EC 3.4.22.13 8 CPSB2 3 5 Amyloid Precursor Protein Secretase2 Cathepsin B12 3 Cysteine Protease2 APPS2 3 EC 3.4.228 APP Secretase2 3
Export aliases for CTSB gene to outside databases Previous GC identifers: GC08M011764 GC08M011571 GC08M011739 GC08M011737 GC08M010630
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Summariesfor CTSB gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for CTSB : The protein encoded by this gene is a lysosomal cysteine proteinase composed of a dimer of disulfide-linked heavy and light chains, both produced from a single protein precursor. It is also known as amyloid precursor protein secretase and is involved in the proteolytic processing of amyloid precursor protein (APP). Incomplete proteolytic processing of APP has been suggested to be a causative factor in Alzheimer disease, the most common cause of dementia. Overexpression of the encoded protein, which is a member of the peptidase C1 family, has been associated with esophageal adenocarcinoma and other tumors. At least five transcript variants encoding the same protein have been found for this gene. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: CATB_HUMAN, P07858 Function : Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Hasalso been implicated in tumor invasion and metastasis Gene Wiki entry for CTSB (Cathepsin B)
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Genomic Viewsfor CTSB gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000008.10 NC_018919.1 NT_077531.4 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CTSB gene promoter: AML1a Other transcription factors Search SABiosciences Chromatin IP Primers for CTSB Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CTSB
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 8p22 Ensembl cytogenetic band: 8p23.1 HGNC cytogenetic band: 8p23.1 CTSB Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 8 GeneLoc Exon Structure
GeneLoc location for GC08M011700: view genomic region
(about GC identifiers )
Start:
11,700,033 bp from pter
End:
11,726,957 bp from pter
Size:
26,925 bases
Orientation:
minus strand
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Proteinsfor CTSB gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CATB_HUMAN, P07858 (See
protein sequence )Recommended Name: Cathepsin B precursor Size : 339 amino acids; 37822 Da
Subunit : Dimer of a heavy chain and a light chain cross-linked by a disulfide bond. Interacts with SRPX2
Subcellular location : Lysosome. Melanosome. Secreted, extracellular space (By similarity). Note=Identified by massspectrometry in melanosome fractions from stage I to stage IV
6/11 PDB 3D structures from and Proteopedia for CTSB (see all 11 ):1CSB (3D)
  1GMY (3D)
  1HUC (3D)
  1PBH (3D)
  2IPP (3D)
  2PBH (3D)
 
Secondary accessions : B3KQR5 B3KRR5 Q503A6 Q96D87Explore the universe of human proteins at neXtProt for CTSB: NX_P07858 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P07858 4/11 DME Specific Peptides for CTSB (P07858 ) (see all 11 )CTSB Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (5 alternative transcripts):
NP_001899.1 NP_680090.1 NP_680091.1 NP_680092.1 NP_680093.1 ENSEMBL proteins: ENSP00000345672 ENSP00000435105 ENSP00000433215 ENSP00000409917 ENSP00000436456 ENSP00000342070 ENSP00000432244 ENSP00000434217 ENSP00000436159 ENSP00000433995 ENSP00000435074 ENSP00000436627 ENSP00000434725 ENSP00000436122 ENSP00000431518 ENSP00000435367 ENSP00000435650 ENSP00000436074 ENSP00000435886 ENSP00000433379 ENSP00000431143 ENSP00000435260 ENSP00000433929 ENSP00000432077 ENSP00000432408 ENSP00000415889 ENSP00000411254 Reactome Protein details: P07858 Human Recombinant Protein Products: Gene Ontology (GO): 5/17 cellular component terms (GO ID links to tree view) (see all 17 ): About this table
CTSB for ontologies About GeneDecksing CTSB Antibody Products: Assay Products for CTSB:
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Protein
Domains / Familiesfor CTSB gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CTSB for domains About GeneDecksing 5/7 InterPro domains/families (see all 7 ):
Graphical View of Domain Structure for InterPro Entry P07858 ProtoNet protein and cluster: P07858
2 Blocks protein families : IPB000668 Papain cysteine protease (C1) family signature IPB012599 Peptidase C1 UniProtKB/Swiss-Prot: CATB_HUMAN, P07858 Similarity : Belongs to the peptidase C1 family
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Functionfor CTSB gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: CATB_HUMAN, P07858 Function : Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Hasalso been implicated in tumor invasion and metastasis Catalytic activity : Hydrolysis of proteins with broad specificity for peptide bonds. Preferentially cleaves -Arg-Arg--Xaa bonds in small molecule substrates (thus differing from cathepsin L). In addition to being an endopeptidase, shows peptidyl-dipeptidase activity, liberating C-terminal dipeptides
Genatlas biochemistry entry for CTSB : cathepsin B,lysosomal cysteine proteinase,ubiquitously expressed,?same as APP secretase,?prorenin-processing enzyme,papain superfamily,involved in matrix degradation during endochondral ossification,contributing to both local invasion at the early stage and remote metastasis in colorectal cancer Enzyme Numbers (IUBMB): EC 3.4.22.1 1 2 EC 3.4.22 2 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CTSB (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CTSB (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 5 ): CTSB (NM_001908 ) Sino Biological Human cDNA Clone for CTSB DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CTSB Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CTSB
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CTSB
Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7 ): About this table
CTSB for ontologies About GeneDecksing 4 GenomeRNAi human phenotypes for CTSB :Animal Models: Mouse knock-out Ctsb tm1Jde for CTSB 14 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Ctsb) :
CTSB for phenotypes About GeneDecksing
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Pathways & Interactionsfor CTSB gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/12 super-pathways (see all 12 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Immune System 2 Collagen formation 3 Degradation of the extracellular matrix 4 Protein Stability 5 Apoptosis and Autophagy
Pathway sources See GeneCards unified pathways Show all pathways 2
Cell Signaling Technology (CST) Pathways for CTSB 1 GeneGo (Thomson Reuters) Pathway for CTSB 5/12
Reactome Pathways for CTSB (see all 12 )2
Kegg Pathways (Kegg details for CTSB) :
CTSB for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CTSB STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/57 Interacting proteins for CTSB (P07858 1 , 2 , 3 ENSP00000342070 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 57 )About this table Gene Ontology (GO): 5/18 biological process terms (GO ID links to tree view) (see all 18 ): About this table
CTSB for ontologies About GeneDecksing
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Drugs & Compoundsfor CTSB gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
CTSB for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for CTSB
Browse Tocris compounds for CTSB 10/14 DrugBank Compounds for CTSB (see all 14 ) About this table 10/125 Novoseek chemical compound relationships for CTSB gene (see all 125 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
cysteine
90.8
376
7944391 (4), 9569125 (3), 7731994 (2), 8762055 (2) (see all 99 )
ca 074
89.2
16
9546050 (2), 10739956 (1), 11258881 (1), 10380357 (1) (see all 12 )
actinidin
77.4
11
8654398 (3), 7887904 (2), 7575465 (1), 8718861 (1) (see all 8 )
e 64d
75.8
7
16874052 (1), 16339296 (1), 17097791 (1), 12893746 (1) (see all 6 )
7-amino-4-trifluoromethylcoumarin
75.2
2
1355496 (1), 1356148 (1)
poststatin
74.8
4
8931723 (2), 8931724 (1), 8931725 (1)
z-arg-arg-nhmec
70.1
1
10900131 (1)
leupeptin
68.7
16
12220505 (1), 8762057 (1), 10075843 (1), 10501085 (1) (see all 13 )
trypsinogen
67.5
47
12102727 (4), 19900452 (3), 8286198 (3), 7485384 (3) (see all 20 )
pheg
61.5
1
16029017 (1)
Search CenterWatch for drugs/clinical trials and news about CTSB / CATB
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Transcriptsfor CTSB gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CTSB gene (5 alternative transcripts): NM_001908.3 NM_147780.2 NM_147781.2 NM_147782.2 NM_147783.2 Unigene Cluster for CTSB:
Cathepsin B Hs.520898 [show with all ESTs ] Unigene Representative Sequence: NM_147780 18/37 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 37 ): ENST00000353047 (uc003wuu.3 ) ENST00000420692 ENST00000530640 ENST00000531089 ENST00000453527 ENST00000531551 ENST00000345125 ENST00000533455 ENST00000534510 ENST00000526481 ENST00000530624 ENST00000532409 ENST00000530290 ENST00000533110 ENST00000534636 ENST00000533572 ENST00000530296 ENST00000525076 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CTSB (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CTSB (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 5 ): CTSB (NM_001908 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CTSB Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CTSB
Additional cDNA sequence: AK075393.1 AK092070.1 AK097384.1 AK098296.1 AK127308.1 AK130184.1 AK290239.1 AK296845.1 AK297687.1 BC010240.1 BC095408.1 BX647765.1 BX647952.1 L16510.1 L38712.1 M13230.1 M14221.1 Y18460.1
24/98 DOTS entries (see all 98 ): DT.100850425 DT.100686825
DT.100059728 DT.100849772 DT.95316962 DT.100714463 DT.120646724 DT.100686806 DT.120646898 DT.92061400 DT.95258060 DT.95258117 DT.100686820 DT.120646761 DT.120646609 DT.100686868 DT.100686824 DT.100686850 DT.100686835 DT.95258033 DT.100641889 DT.120646644 DT.100686838 DT.100686805 24/1176 AceView cDNA sequences (see all 1176 ):
BU151673 BQ647205 CA390194 BI770058 CR608531 CR613583 BE907163 AA336919 AU076885 CR609102 CR612757 BE256703 BX438066 CF132665 CR607589 BE166171 BG252355 N20362 CF132644 BE744162 AA337246 AA304513 CF131229 CB145191 GeneLoc Exon Structure 5/12 Alternative Splicing Database (ASD) splice patterns (SP) for CTSB (see all 12 ) About this scheme ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c · 7d ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b · 10c ^ 11a · 11b ^ 12 ^ 13 ^ 14a · SP1 :       -   -   -   -   -   -                   -   -       -   -         SP2 :       -   -   -   -   -     -                 -   -       -   -         SP3 :       -   -   -   -   -   -   -                 -   -       -   -         SP4 :                                                     SP5 :               -   -   -                 -   -                
ExUns: 14b ^ 15 ^ 16a · 16b SP1 :         SP2 :         SP3 :         SP4 :         SP5 :        
ECgene alternative splicing isoforms for CTSB
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Expression for CTSB gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CTSB expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TGGGTGAGCC
About this image CTSB expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See CTSB Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CTSB SOURCE GeneReport for Unigene cluster: Hs.520898 SABiosciences Expression via Pathway-Focused PCR Arrays including CTSB (see all 9 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CTSBBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat CTSB QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CTSB QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CTSB In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CTSB
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Orthologsfor CTSB gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for CTSB gene from 8/28 species (see all 28 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
CTSB1
cathepsin B
75.5(n) 77.41(a)
 
396329 NM_205371.1 NP_990702.1
lizard (Anolis carolinensis)
Reptilia
CTSB6
--
70(a)
1 ↔ 1
GL343309.1(181381-194587)
African clawed frog (Xenopus laevis)
Amphibia
cg10992-prov2
hypothetical protein MGC52983
76.02(n)
 
BC046667.1
zebrafish (Danio rerio)
Actinopterygii
BC044517.12
--
76.33(n)
 
394030 BC044517.1
fruit fly (Drosophila melanogaster)
Insecta
CG109921 , 3
cathepsin B3 CG109921
58(a) 3 59.81(n) 1 60.13(a) 1
 
12C23 32341 1 NM_132692.2 1 NP_572920.1 1
worm (Caenorhabditis elegans)
Secernentea
F57F5.13
cysteine protease
51(a) (best of 7)
 
V(12005606-12006629) --
thale cress (Arabidopsis thaliana)
eudicotyledons
AT1G023051
putative cathepsin B-like cysteine protease
55.36(n) 53.15(a)
 
839538 NM_100111.3 NP_563648.1
rice (Oryza sativa)
Liliopsida
AK064820.12
--
78.02(n)
 
AK064820.1
ENSEMBL Gene Tree for CTSB (if available)TreeFam Gene Tree for CTSB (if available)
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Paralogsfor CTSB gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for CTSB gene TINAG 2 CTSL1 2 CTSF 2 CTSO 2 CTSW 2 CTSK 2 CTSS 2 CTSL2 2 CTSH 2 CTSC 2 TINAGL1 2 CTSZ 2 2 SIMAP similar genes for CTSB using alignment to 18 protein entries: CATB_HUMAN (see all proteins ):DKFZp686N0152 TINAG
CTSB for paralogs About GeneDecksing 2 Pseudogenes.org Pseudogenes for CTSB PGOHUM00000245227 PGOHUM00000245492
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Genomic Variantsfor CTSB gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 8 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CTSB (11700033 - 11726957 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 19 variations for CTSB 3 CNVs : 48032 52353 52352 15/16 Inversions (see all 16 ): 37318 37316 37307 37317 37311 37319 37320 37315 37312 37321 37304 37313 37314 37305 37306 Human Gene Mutation Database (HGMD) : CTSB SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CTSB
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Disorders
/ Diseasesfor CTSB gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CTSB for disorders About GeneDecksing
OMIM gene information: 116810
OMIM disorders : --20/154 diseases for CTSB (see all 154 ): About MalaCards adenocarcinoma alzheimer's disease dementia ceroid lipofuscinosis esophagitis neuronal ceroid-lipofuscinosis disseminated intravascular coagulation lysosomal storage disease retinol binding protein gingival overgrowth tropical calcific pancreatitis duchenne muscular dystrophy familial mediterranean fever squamous cell carcinoma giant cell tumor mucolipidosis ii type 2 diabetes mellitus ileum cancer gastric cardia adenocarcinoma pelvic inflammatory disease 4 diseases from the University of Copenhagen DISEASES database for CTSB :Pancreatitis Alzheimer's disease Carcinoma Arthritis 10/97 Novoseek disease relationships for CTSB gene (see all 97 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
56.5
392
9524062 (7), 9499362 (6), 11147599 (6), 9770500 (6) (see all 99 )
osteoclastoma
54.7
3
8467955 (2), 1540624 (1)
metastasis
54.3
104
7677635 (3), 8330299 (3), 18296264 (3), 11147599 (3) (see all 79 )
alzheimers disease
49.6
26
1795881 (3), 7674807 (2), 11033346 (1), 11880515 (1) (see all 21 )
senile plaques
49.5
9
1692625 (2), 1795881 (1), 7592716 (1), 1584965 (1) (see all 8 )
cancer
48.8
131
2097084 (4), 14587299 (4), 10374777 (3), 10866820 (3) (see all 83 )
i-cell disease
48.4
1
8240260 (1)
glioblastoma
45.3
41
19774387 (6), 11494030 (6), 14730346 (4), 7820956 (4) (see all 15 )
glioma
44.9
54
10571410 (5), 7820956 (4), 17172424 (4), 11494030 (4) (see all 27 )
chronic periodontitis
44.8
7
9429076 (2), 8884632 (1), 16953825 (1), 1531511 (1) (see all 6 )
Genetic Association Database (GAD): CTSB Human Genome Epidemiology (HuGE) Navigator: CTSB (10 documents) Export disorders for CTSB gene to outside databases
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Publicationsfor CTSB gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CTSB gene, integrated from 9 sources (see all 1117 ): (articles sorted by number of sources associating them with CTSB) Utopia : connect your pdf to the dynamic world of online information
Human gastric adenocarcinoma cathepsin B: isolation and sequencing of full-length cDNAs and polymorphisms of the gene. (PubMed id 8112600) 1 , 2 , 3, 9 Cao L.... Sloane B.F. (1994) Nucleotide and predicted amino acid sequences of cloned human and mouse preprocathepsin B cDNAs. (PubMed id 3463996) 1 , 2 , 3 Chan S.J.... Steiner D.F. (1986) Human tumour cathepsin B. Comparison with normal liver cathepsin B. (PubMed id 1637335) 1 , 2 , 9 Moin K.... Sloane B.F. (1992) A polymorphic marker for the human cathepsin B gene. (PubMed id 11513559) 1 , 4, 9 MacKenzie J.R....Bickerstaffe R. (2001) The refined 2.15 A X-ray crystal structure of human liver cathepsin B: the structural basis for its specificity. (PubMed id 1868826) 1 , 2 , 9 Musil D.... Bode W. (1991) Epileptic and developmental disorders of the speech cortex: ligand/receptor interaction of wild-type and mutant SRPX2 with the plasminogen activator receptor uPAR. (PubMed id 18718938) 1 , 2 Royer-Zemmour B....Szepetowski P. (2008) Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. (PubMed id 17081065) 1 , 2 Chi A....Hunt D.F. (2006) Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743) 1 , 2 Otsuki T....Isogai T. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004)
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External Searches for CTSB gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CTSB gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing CTSB gene
(According to HUGE )
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Specialized Databases showing CTSB gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for CTSB gene: Search GeneIP for patents involving CTSB GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CTSB gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for CTSB OriGene shRNA RFP for CTSB OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CTSB OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CTSB OriGene Protein Over-expression Lysate for CTSB Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CTSB OriGene 3'-UTR Clone for CTSB OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CTSB OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CTSB Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for CTSB OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CTSB OriGene Custom Protein Services for CTSB OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CTSB QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CTSB QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CTSB QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CTSB QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CTSB QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CTSB
Antibodies & Assays for CTSB  
Search Tocris compounds for CTSB
CTSB Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CTSB
ThermoFisher Antibodies for CTSB
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CTSB
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