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Aliases & Descriptions for CTGF
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CCN2 1, 2, 3 | | HCS24 2, 3 | | IGFBP8 1, 2, 3 | | MGC102839 2 | | NOV2 2, 5 | | OTTHUMP00000017213 2 |
| | | Descriptions |
|---|
| Hypertrophic chondrocyte-specific protein 24 2, 3 | | connective tissue growth factor 2 | | insulin-like growth factor-binding protein 8 2 |
|
| | Search outside databases for aliases for CTGF genePrevious GC identifers: GC06M131892 GC06M132116 GC06M132249 |
Summaries for CTGF(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: CTGF_HUMAN, P29279Function: Major connective tissue mitoattractant secreted by vascular endothelial cells. Promotes proliferation and differentiation of chondrocytes. Mediates heparin- and divalent cation-dependent cell adhesion in many cell types including fibroblasts, myofibroblasts, endothelial and epithelial cells. Enhances fibroblast growth factor-induced DNA synthesisGene Wiki entry for CTGF |
Genomic Location for CTGF
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CTGF gene 
Entrez Gene cytogenetic band: 6q23.1 Ensembl cytogenetic band: 6q23.2 HGNC cytogenetic band: 6q23.2CTGF Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure GeneLoc location for GC06M132311:
(about GC identifiers)
Start:
|
132,311,009 bp from pter |
End:
|
132,314,211 bp from pter |
Size:
|
3,203 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000006.10 NT_025741.14
| Proteins for CTGF
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CTGF_HUMAN, P29279 (See
protein sequence)Recommended Name: Connective tissue growth factor precursor Size: 349 amino acids; 38091 Da
Subunit: Monomer
Subcellular location: Secreted, extracellular space, extracellular matrix (By similarity). Secreted (By similarity)
Secondary accessions: Q6LCY0 Q96A79 Q96QX2Alternative splicing: 2 isoforms: P29279-1 P29279-2 REFSEQ proteins: NP_001892.1
ENSEMBL proteins: ENSP00000356954
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CTGF: Assays for CTGF: | Protein
Domains/ Families for CTGF(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P29279
ProtoNet protein and cluster: P29279 5 Blocks protein families: IPB000867 Insulin-like growth factor-binding protein IPB000884 Thrombospondin IPB001007 von Willebrand factor IPB006207 Cystine knot IPB006208 Cystine knot domain
UniProtKB/Swiss-Prot: CTGF_HUMAN, P29279Similarity: Belongs to the CCN familySimilarity: Contains 1 CTCK (C-terminal cystine knot-like) domainSimilarity: Contains 1 IGFBP N-terminal domainSimilarity: Contains 1 TSP type-1 domainSimilarity: Contains 1 VWFC domain | Gene Function for CTGF
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001901
Applied Biosystems Silencer® siRNAs for CTGF
Sigma-Aldrich siRNA for CTGF  Sigma-Aldrich shRNA Panels and shRNA for CTGF  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001901                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001901                                  untagged cDNA clone in CMV expression vector: NM_001901 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001901
UniProtKB/Swiss-Prot: CTGF_HUMAN, P29279Function: Major connective tissue mitoattractant secreted by vascular endothelial cells. Promotes proliferation and differentiation of chondrocytes. Mediates heparin- and divalent cation-dependent cell adhesion in many cell types including fibroblasts, myofibroblasts, endothelial and epithelial cells. Enhances fibroblast growth factor-induced DNA synthesisGenatlas biochemistry entry for CTGF:connective tissue growth factor,homologous to NOV,immediate early response gene4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Ctgf):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CTGF
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 2 Sigma-Aldrich "Your Favorite Gene" Pathways for CTGF (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for CTGF 
5/86 Interacting proteins for CTGF (P292792 ENSP000003569543) via UniProtKB, MINT, and/or STRING (see all 86
)About this table
5/14 Gene Ontology (GO) biological process terms (links to tree view) (see all 14
): About this table
|
Drugs & Compounds for CTGF(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CTGF 10/30 Novoseek chemical compound relationships for CTGF gene (see all 30
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| tgf beta1 |
64.80 |
44 |
17876891 (6), 15469966 (5), 16469114 (3), 18369694 (3) (see all 12) |
| des-arg(10)-kallidin |
59.70 |
7 |
10777533 (3), 15703175 (3) |
| pd 98,059 |
43.16 |
7 |
15066218 (1), 15955090 (1), 15946238 (1), 16086056 (1) (see all 5) |
| sp 600125 |
36.43 |
6 |
18922980 (1), 16086056 (1) |
| geranylgeranyl pyrophosphate |
34.80 |
5 |
15298857 (1), 11487529 (1) |
| sphingosylphosphorylcholine |
32.69 |
12 |
15946238 (5), 17592175 (2) |
| procollagen |
29.65 |
4 |
16646035 (1), 16680573 (1), 15994428 (1), 17372041 (1) |
| oligonucleotide |
28.30 |
22 |
14996733 (3), 10607888 (3), 12714619 (2), 11278731 (2) (see all 10) |
| phosphatidylinositol |
25.54 |
6 |
12760970 (1), 15946238 (1), 15377500 (1), 17498677 (1) (see all 5) |
| farnesyl diphosphate |
22.79 |
3 |
15298857 (1), 11487529 (1) |
About this table
|
Transcripts for CTGF(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001901
Sigma-Aldrich siRNA for CTGF  Sigma-Aldrich shRNA Panels and shRNA for CTGF  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001901 REFSEQ mRNAs for CTGF gene: NM_001901.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001901               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001901                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001901                                  untagged cDNA clone in CMV expression vector: NM_001901  Additional cDNA sequence: AF127918.1 AK092280.1 AK125220.1 AK290884.1 AK315207.1 BC087839.1 BT019794.1 BT019795.1 CR541734.1 CR541759.1 M92934.1 U14750.1 X78947.1 24 DOTS entries: DT.100855063 DT.40124189 DT.100866437 DT.95157439 DT.99948760 DT.95157436 DT.100664111 DT.100661459 DT.95193607 DT.91759638 DT.97860643 DT.91973727 DT.121306117 DT.100039679 DT.100661461 DT.102834465 DT.121305940 DT.121305946 DT.121305976 DT.95157443 DT.100647949 DT.100657846 DT.100868213 DT.121306122 24/962 AceView cDNA sequences (see all 962
):CA414888 CA450417 AW305059 CA413001 AI913185 CA448629 CA413727 AW005973 AW780245 CA771036 AA305173 BM981417 AA373257 CD678647 CA449044 CA748897 BQ045061 BQ182171 BQ183946 AI720883 CN480101 CN484574 BG927679 BQ425870
highest scoring ESTs for CTGF:X78947 AI751961 AK125220 AL043964 AL542806 AU129464 AU132344 AU133455 AU134062 AU280594 Unigene Cluster for CTGF: Connective tissue growth factor Hs.591346 [show with all ESTs]Unigene Representative Sequence: NM_001901
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for CTGF
| ExUns: | 1a | · | 1b | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4a | · | 4b | · | 4c | ^ | 5a | · | 5b | |
| SP1: | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CTGF
1 Ensembl transcript including schematic representation: ENST00000367976
|
Expression for CTGF
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CTGF expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CTGF
1 / 2 / 3 4 probe-sets matching CTGF gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTTGCACCTT
SOURCE GeneReport for Unigene cluster: Hs.591346
Expression variation in blood from EXPOLDB for CTGF |
Orthologs for CTGF
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CTGF gene from 5/9 species (see all 9
)
About this table Species with no ortholog for CTGF
ENSEMBL Gene Tree for CTGF | Paralogs for CTGF(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CTGF gene
- NOV2 WISP22 CYR612
|
SNPs/Variants for CTGF(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
The following additional 35 SNP(s) have been
found in Applied Biosystems data source: (Click
for
Applied Biosystems TaqMan ® Genotyping Assay)
HapMap Linkage Disequilibrium images for CTGF (up to first 250kb)
|
Disorders & Mutations for CTGF
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 121009
10/95 Novoseek disease relationships for CTGF gene (see all 95
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| renal fibrosis |
80.50 |
31 |
17300978 (3), 12217862 (2), 17376761 (2), 18266088 (2) (see all 19) |
| skin fibrosis |
72.84 |
9 |
8618012 (1), 17034590 (1), 18481257 (1), 9550312 (1) (see all 5) |
| diabetic nephropathies |
69.35 |
42 |
16373901 (3), 16501850 (3), 15111539 (2), 15882275 (2) (see all 27) |
| sclerosis systemic |
68.88 |
29 |
10942593 (7), 17881752 (3), 10648031 (1), 18199873 (1) (see all 14) |
| conjunctival scarring |
68.60 |
1 |
15818386 (1) |
| scleroderma disease |
62.52 |
1 |
12368229 (1) |
| pulmonary fibrosis |
61.60 |
18 |
10648031 (2), 9700098 (2), 18610632 (2), 18525195 (1) (see all 10) |
| subcutaneous fibrosis |
58.62 |
3 |
12672195 (1), 12578541 (1), 18481257 (1) |
| glomerulosclerosis |
56.28 |
11 |
12846740 (3), 15319369 (1), 16790529 (1), 15012739 (1) (see all 8) |
| wilms tumor |
55.59 |
19 |
18922980 (4), 12064632 (1), 15611078 (1), 16287080 (1) (see all 14) |
About this table
1 PharmGKB disease relationship for CTGF geneAbout this table
Human Gene Mutation Database: CTGF Genetic Association Database: CTGF Human Genome Epidemiology Navigator: CTGF (9 documents)
|
Medical News for CTGF(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for CTGF (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/608 PubMed articles for CTGF gene (see all 608
):- Connective tissue growth factor: a cysteine-rich mitogen secreted by human vascular endothelial cells is related to the SRC-induced immediate early gene product CEF-10. (PubMed id 1654338)2, 3, 4 Bradham D.M.... Grotendorst G.R. (1991)
- The amount of calcium-deficient hexagonal hydroxyapatite in aortic valves is influenced by gender and associated with genetic polymorphisms in patients with severe calcific aortic stenosis. (PubMed id 15039132)1, 3, 6 Ortlepp J.R....Hoffmann R. (2004)
- The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)3, 4 Mungall A.J.... Beck S. (2003)
- The heparin-binding 10 kDa fragment of connective tissue growth factor (CTGF) containing module 4 alone stimulates cell adhesion. (PubMed id 12553878)3, 4 Ball D.K.... Brigstock D.R. (2003)
- Effects of CTGF/Hcs24, a product of a hypertrophic chondrocyte- specific gene, on the proliferation and differentiation of chondrocytes in culture. (PubMed id 10614647)3, 4 Nakanishi T.... Takigawa M. (2000)
- Human connective tissue growth factor is expressed in advanced atherosclerotic lesions. (PubMed id 9054739)3, 4 Oemar B.S.... Luescher T.F. (1997)
- Connective tissue growth factor. (PubMed id 1293144)3, 4 Igarashi A.... Grotendorst G.R. (1992)
- Connective tissue growth factor is secreted through the Golgi and is degraded in the endosome. (PubMed id 11697887)1, 3 Chen Y....Leask A. (2001)
- Expression of connective tissue growth factor in tumor tissues is an independent predictor of poor prognosis in patients with gastric cancer. (PubMed id 18395916)1, 3 Liu L.Y....Lv Z.H. (2008)
- Promoter hypermethylation contributes to frequent inactivation of a putative conditional tumor suppressor gene connective tissue growth factor in ovarian cancer. (PubMed id 17671176)1, 3 Kikuchi R....Imoto I. (2007)
|
Search for CTGF
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CTGF
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CTGF
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CTGF(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CTGF(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CTGF:

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Incremental update: 13 Oct 2009
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