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Aliases for CTBP1-AS2 Gene

Subcategory (RNA class) for CTBP1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CTBP1-AS2 Gene

  • CTBP1 Antisense RNA 2 (Head To Head) 2 3 5
  • CTBP1 Antisense RNA 1 (Head To Head) 2 3
  • CTBP1 Antisense RNA 1 (Non-Protein Coding) 3
  • Chromosome 4 Open Reading Frame 42 2
  • CTBP1-AS1 3
  • C4orf42 3

External Ids for CTBP1-AS2 Gene

Previous HGNC Symbols for CTBP1-AS2 Gene

  • C4orf42
  • CTBP1-AS1

Summaries for CTBP1-AS2 Gene

GeneCards Summary for CTBP1-AS2 Gene

CTBP1-AS2 (CTBP1 Antisense RNA 2 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTBP1-AS2 Gene

Genomics for CTBP1-AS2 Gene

Regulatory Elements for CTBP1-AS2 Gene

Enhancers for CTBP1-AS2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around CTBP1-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for CTBP1-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around CTBP1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CTBP1-AS2 Gene

1,249,300 bp from pter
1,288,291 bp from pter
38,992 bases
Plus strand

Genomic View for CTBP1-AS2 Gene

Genes around CTBP1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTBP1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTBP1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTBP1-AS2 Gene

Proteins for CTBP1-AS2 Gene

Post-translational modifications for CTBP1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTBP1-AS2 Gene

Domains & Families for CTBP1-AS2 Gene

Suggested Antigen Peptide Sequences for CTBP1-AS2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for CTBP1-AS2 Gene

Function for CTBP1-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTBP1-AS2 Gene

Localization for CTBP1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CTBP1-AS2 Gene

Pathways & Interactions for CTBP1-AS2 Gene

SuperPathways for CTBP1-AS2 Gene

No Data Available

Interacting Proteins for CTBP1-AS2 Gene

Gene Ontology (GO) - Biological Process for CTBP1-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for CTBP1-AS2 Gene

Drugs & Compounds for CTBP1-AS2 Gene

No Compound Related Data Available

Transcripts for CTBP1-AS2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CTBP1-AS2 Gene

No ASD Table

Relevant External Links for CTBP1-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CTBP1-AS2 Gene

mRNA expression in normal human tissues for CTBP1-AS2 Gene

genes like me logo Genes that share expression patterns with CTBP1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CTBP1-AS2 Gene

Orthologs for CTBP1-AS2 Gene

Evolution for CTBP1-AS2 Gene

Gene Tree for CTBP1-AS2 (if available)
Gene Tree for CTBP1-AS2 (if available)

No data available for Orthologs for CTBP1-AS2 Gene

Paralogs for CTBP1-AS2 Gene

No data available for Paralogs for CTBP1-AS2 Gene

Variants for CTBP1-AS2 Gene

Sequence variations from dbSNP and Humsavar for CTBP1-AS2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs34544185 -- 1,253,370(+) AAGGG(-/G)CTGCA downstream-variant-500B
rs72501962 -- 1,252,250(+) ATTGC(A/T)GACAC nc-transcript-variant
rs79061177 -- 1,253,027(+) CTGCT(A/G)TAAGG downstream-variant-500B
rs139035675 -- 1,252,893(+) TCTAT(A/G)TTGTC nc-transcript-variant
rs142953148 -- 1,252,993(+) ACAAT(C/T)GCTGA nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for CTBP1-AS2 Gene

Disorders for CTBP1-AS2 Gene

Relevant External Links for CTBP1-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CTBP1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTBP1-AS2 Gene

Publications for CTBP1-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 67
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  3. A single-nucleotide polymorphism in ANK1 is associated with susceptibility to type 2 diabetes in Japanese populations. (PMID: 22456796) Imamura M. … Kadowaki T. (Hum. Mol. Genet. 2012) 3
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for CTBP1-AS2 Gene

Sources for CTBP1-AS2 Gene