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Aliases for CTAGE7P Gene

Aliases for CTAGE7P Gene

  • CTAGE Family Member 7, Pseudogene 2 3 5
  • Meningioma Expressed Antigen 6 (Coiled-Coil Proline-Rich) Pseudogene 2 3
  • CTAGE Family Pseudogene 2 3
  • CTAGE Family, Member 7, Pseudogene 2
  • CTAGE Family, Member 5 Pseudogene 3
  • CTAGE Family, Member 7 2
  • BA500G10.2 3
  • RcCTAGE5 3
  • CTAGE7 3
  • CTAGEP 3

External Ids for CTAGE7P Gene

Previous HGNC Symbols for CTAGE7P Gene

  • CTAGEP
  • CTAGE7

Previous GeneCards Identifiers for CTAGE7P Gene

  • GC10P131905
  • GC10P125484

Summaries for CTAGE7P Gene

GeneCards Summary for CTAGE7P Gene

CTAGE7P (CTAGE Family Member 7, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTAGE7P Gene

Genomics for CTAGE7P Gene

Regulatory Elements for CTAGE7P Gene

Enhancers for CTAGE7P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G130108 1.1 ENCODE 0.7 +4.6 4634 3.5 HDGF PKNOX1 FOXA2 CREB3L1 WRNIP1 SIN3A ARID4B DMAP1 ZNF2 YY1 LINC00959 GLRX3 CTAGE7P
GH10G130105 0.7 ENCODE 0.7 -0.1 -78 0.2 HIC1 ZNF366 PATZ1 FOSL2 PRDM10 KLF8 ZBTB10 SCRT1 NRF1 ZEB2 PPIAP32 GLRX3 CTAGE7P ENSG00000277218
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CTAGE7P on UCSC Golden Path with GeneCards custom track

Genomic Location for CTAGE7P Gene

Chromosome:
10
Start:
130,106,009 bp from pter
End:
130,108,838 bp from pter
Size:
2,830 bases
Orientation:
Plus strand

Genomic View for CTAGE7P Gene

Genes around CTAGE7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTAGE7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTAGE7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTAGE7P Gene

Proteins for CTAGE7P Gene

Post-translational modifications for CTAGE7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTAGE7P Gene

Domains & Families for CTAGE7P Gene

Gene Families for CTAGE7P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CTAGE7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CTAGE7P Gene

Function for CTAGE7P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTAGE7P Gene

Localization for CTAGE7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CTAGE7P Gene

Pathways & Interactions for CTAGE7P Gene

SuperPathways for CTAGE7P Gene

No Data Available

Interacting Proteins for CTAGE7P Gene

Gene Ontology (GO) - Biological Process for CTAGE7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CTAGE7P Gene

Drugs & Compounds for CTAGE7P Gene

No Compound Related Data Available

Transcripts for CTAGE7P Gene

mRNA/cDNA for CTAGE7P Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CTAGE7P Gene

CTAGE family, member 7, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CTAGE7P Gene

No ASD Table

Relevant External Links for CTAGE7P Gene

GeneLoc Exon Structure for
CTAGE7P
ECgene alternative splicing isoforms for
CTAGE7P

Expression for CTAGE7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CTAGE7P Gene

mRNA differential expression in normal tissues according to GTEx for CTAGE7P Gene

This gene is overexpressed in Testis (x8.3).

NURSA nuclear receptor signaling pathways regulating expression of CTAGE7P Gene:

CTAGE7P

SOURCE GeneReport for Unigene cluster for CTAGE7P Gene:

Hs.620802
genes like me logo Genes that share expression patterns with CTAGE7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTAGE7P Gene

Orthologs for CTAGE7P Gene

Evolution for CTAGE7P Gene

ENSEMBL:
Gene Tree for CTAGE7P (if available)
TreeFam:
Gene Tree for CTAGE7P (if available)

No data available for Orthologs for CTAGE7P Gene

Paralogs for CTAGE7P Gene

No data available for Paralogs for CTAGE7P Gene

Variants for CTAGE7P Gene

Sequence variations from dbSNP and Humsavar for CTAGE7P Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1002679395 -- 130,105,914(+) CCCCC(C/T)CGCAG intron-variant, upstream-variant-2KB
rs1003933600 -- 130,105,036(+) CAATT(A/C)TTCTG intron-variant, upstream-variant-2KB
rs1005590040 -- 130,108,947(+) TCTTC(A/C)TTGCC intron-variant, downstream-variant-500B
rs1005651376 -- 130,105,362(+) AGGCC(A/T)GTTAA intron-variant, upstream-variant-2KB
rs1006020582 -- 130,109,143(+) CAAAC(C/T)TCTGC intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for CTAGE7P Gene

Variant ID Type Subtype PubMed ID
nsv1048253 CNV gain 25217958
nsv832024 CNV loss 17160897
nsv948227 CNV duplication 23825009

Relevant External Links for CTAGE7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTAGE7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CTAGE7P Gene

Disorders for CTAGE7P Gene

Relevant External Links for CTAGE7P

Genetic Association Database (GAD)
CTAGE7P
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CTAGE7P

No disorders were found for CTAGE7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTAGE7P Gene

Publications for CTAGE7P Gene

  1. Emergence of young human genes after a burst of retroposition in primates. (PMID: 16201836) Marques A.C. … Kaessmann H. (PLoS Biol. 2005) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CTAGE7P Gene

Sources for CTAGE7P Gene

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