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Aliases for CTAGE15 Gene

Aliases for CTAGE15 Gene

  • CTAGE Family, Member 15 2 3
  • CTAGE Family, Member 15, Pseudogene 2 3
  • Protein CTAGE-15 3 4
  • CTAGE15P 3 4
  • CTAGE Family Member 15 3
  • CTAGE-15 3

External Ids for CTAGE15 Gene

Previous HGNC Symbols for CTAGE15 Gene

  • CTAGE15P

Previous GeneCards Identifiers for CTAGE15 Gene

  • GC07P143294
  • GC07P143301
  • GC07P143315

Summaries for CTAGE15 Gene

GeneCards Summary for CTAGE15 Gene

CTAGE15 (CTAGE Family, Member 15) is a Protein Coding gene. An important paralog of this gene is CTAGE9.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTAGE15 Gene

Genomics for CTAGE15 Gene

Genomic Location for CTAGE15 Gene

Start:
143,571,801 bp from pter
End:
143,574,387 bp from pter
Size:
2,587 bases
Orientation:
Plus strand

Genomic View for CTAGE15 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CTAGE15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTAGE15 Gene

No data available for Regulatory Elements for CTAGE15 Gene

Proteins for CTAGE15 Gene

  • Protein details for CTAGE15 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A4D2H0-CTGEF_HUMAN
    Recommended name:
    cTAGE family member 15
    Protein Accession:
    A4D2H0
    Secondary Accessions:
    • A6H8Z8

    Protein attributes for CTAGE15 Gene

    Size:
    777 amino acids
    Molecular mass:
    87868 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CTAGE15 Gene

Proteomics data for CTAGE15 Gene at MOPED

Post-translational modifications for CTAGE15 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CTAGE15 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CTAGE15 Gene

Domains for CTAGE15 Gene

Protein Domains for CTAGE15 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A4D2H0

UniProtKB/Swiss-Prot:

CTGEF_HUMAN :
  • A4D2H0
Family:
  • Belongs to the cTAGE family.
genes like me logo Genes that share domains with CTAGE15: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for CTAGE15 Gene

Function for CTAGE15 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CTAGE15 Gene

Localization for CTAGE15 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CTAGE15 Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for CTAGE15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with CTAGE15: view

No data available for Subcellular locations from COMPARTMENTS for CTAGE15 Gene

Pathways for CTAGE15 Gene

SuperPathways for CTAGE15 Gene

No Data Available

Interacting Proteins for CTAGE15 Gene

Gene Ontology (GO) - Biological Process for CTAGE15 Gene

None

No data available for Pathways by source for CTAGE15 Gene

Transcripts for CTAGE15 Gene

mRNA/cDNA for CTAGE15 Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CTAGE15 Gene

CTAGE family, member 15:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CTAGE15 Gene

No ASD Table

Relevant External Links for CTAGE15 Gene

GeneLoc Exon Structure for
CTAGE15
ECgene alternative splicing isoforms for
CTAGE15

Expression for CTAGE15 Gene

mRNA expression in normal human tissues for CTAGE15 Gene

mRNA differential expression in normal tissues according to GTEx for CTAGE15 Gene

This gene is overexpressed in Testis (12.1).

SOURCE GeneReport for Unigene cluster for CTAGE15 Gene Hs.450233

genes like me logo Genes that share expressions with CTAGE15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for CTAGE15 Gene

Orthologs for CTAGE15 Gene

This gene was present in the common ancestor of animals.

Orthologs for CTAGE15 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC470576 35
  • 94.44 (n)
  • 89.15 (a)
cow
(Bos Taurus)
Mammalia -- 36
  • 71 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 45 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Ctage5 36
  • 65 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 34 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 33 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 36
  • 30 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 31 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii ctage5 36
  • 35 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta Tango1 36
  • 9 (a)
OneToMany
Species with no ortholog for CTAGE15:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CTAGE15 Gene

ENSEMBL:
Gene Tree for CTAGE15 (if available)
TreeFam:
Gene Tree for CTAGE15 (if available)

Paralogs for CTAGE15 Gene

Paralogs for CTAGE15 Gene

Selected SIMAP similar genes for CTAGE15 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CTAGE15: view

Variants for CTAGE15 Gene

Sequence variations from dbSNP and Humsavar for CTAGE15 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1731345 -- 143,572,680(+) CACAA(C/T)GGATG reference, missense
rs2140791 -- 143,574,844(+) tcata(C/T)tttAA downstream-variant-500B
rs2949711 -- 143,571,329(+) tacca(A/G)tacag upstream-variant-2KB
rs2949712 -- 143,571,340(+) GGCAG(A/G)CCAAA upstream-variant-2KB
rs2966649 -- 143,571,253(-) TACAC(C/T)CTTCT upstream-variant-2KB

Relevant External Links for CTAGE15 Gene

HapMap Linkage Disequilibrium report
CTAGE15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CTAGE15 Gene

Disorders for CTAGE15 Gene

No disorders were found for CTAGE15 Gene.

No data available for UniProtKB/Swiss-Prot for CTAGE15 Gene

Publications for CTAGE15 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 4
  4. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for CTAGE15 Gene

Sources for CTAGE15 Gene

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