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Aliases for CTAGE13P Gene

Aliases for CTAGE13P Gene

  • CTAGE Family Member 13, Pseudogene 2 3 5
  • CTAGE Family, Member 13, Pseudogene 2

External Ids for CTAGE13P Gene

Previous GeneCards Identifiers for CTAGE13P Gene

  • GC00U931510
  • GC06M168689

Summaries for CTAGE13P Gene

GeneCards Summary for CTAGE13P Gene

CTAGE13P (CTAGE Family Member 13, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTAGE13P Gene

Genomics for CTAGE13P Gene

Regulatory Elements for CTAGE13P Gene

Enhancers for CTAGE13P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G168273 1.2 Ensembl ENCODE 0.4 +15.2 15249 1.8 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 SP5 MXD4 NFYC CTAGE13P LOC101929420
GH06G168272 0.8 ENCODE 0.4 +16.9 16877 0.8 CTCF LEF1 PKNOX1 ATF1 SAP130 TAL1 ARID4B GATA2 ZNF652 RNF2 CTAGE13P LOC101929420
GH06G168260 1 ENCODE 0.3 +27.8 27783 2.5 HNRNPUL1 FOXA2 ATF1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 MIER2 FRMD1 LOC105378137 LOC101929420 CTAGE13P
GH06G168247 0.9 ENCODE 0.3 +41.6 41595 1.0 FOXA2 FEZF1 ZNF2 ZNF48 YY1 KLF7 ZNF263 YY2 TSHZ1 REST SMOC2 LOC101929420 CTAGE13P
GH06G168264 0.9 ENCODE 0.3 +24.6 24588 1.0 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 SP5 REST PPARG KAT8 LOC105378137 CTAGE13P LOC101929420
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CTAGE13P on UCSC Golden Path with GeneCards custom track

Genomic Location for CTAGE13P Gene

Chromosome:
6
Start:
168,286,905 bp from pter
End:
168,289,350 bp from pter
Size:
2,446 bases
Orientation:
Minus strand

Genomic View for CTAGE13P Gene

Genes around CTAGE13P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTAGE13P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTAGE13P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTAGE13P Gene

Proteins for CTAGE13P Gene

Post-translational modifications for CTAGE13P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTAGE13P Gene

Domains & Families for CTAGE13P Gene

Gene Families for CTAGE13P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CTAGE13P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CTAGE13P Gene

Function for CTAGE13P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTAGE13P Gene

Localization for CTAGE13P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CTAGE13P Gene

Pathways & Interactions for CTAGE13P Gene

SuperPathways for CTAGE13P Gene

No Data Available

Interacting Proteins for CTAGE13P Gene

Gene Ontology (GO) - Biological Process for CTAGE13P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CTAGE13P Gene

Transcripts for CTAGE13P Gene

mRNA/cDNA for CTAGE13P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CTAGE13P Gene

No ASD Table

Relevant External Links for CTAGE13P Gene

GeneLoc Exon Structure for
CTAGE13P
ECgene alternative splicing isoforms for
CTAGE13P

Expression for CTAGE13P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CTAGE13P Gene

mRNA differential expression in normal tissues according to GTEx for CTAGE13P Gene

This gene is overexpressed in Testis (x47.7).

NURSA nuclear receptor signaling pathways regulating expression of CTAGE13P Gene:

CTAGE13P
genes like me logo Genes that share expression patterns with CTAGE13P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTAGE13P Gene

Orthologs for CTAGE13P Gene

Evolution for CTAGE13P Gene

ENSEMBL:
Gene Tree for CTAGE13P (if available)
TreeFam:
Gene Tree for CTAGE13P (if available)

No data available for Orthologs for CTAGE13P Gene

Paralogs for CTAGE13P Gene

No data available for Paralogs for CTAGE13P Gene

Variants for CTAGE13P Gene

Relevant External Links for CTAGE13P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTAGE13P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTAGE13P Gene

Disorders for CTAGE13P Gene

Relevant External Links for CTAGE13P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CTAGE13P

No disorders were found for CTAGE13P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTAGE13P Gene

Publications for CTAGE13P Gene

No publications were found for CTAGE13P Gene.

Products for CTAGE13P Gene

Sources for CTAGE13P Gene

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