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Aliases for CTAGE10P Gene

Aliases for CTAGE10P Gene

  • CTAGE Family Member 10, Pseudogene 2 3 5
  • CTAGE Family, Member 10, Pseudogene 2

External Ids for CTAGE10P Gene

Previous GeneCards Identifiers for CTAGE10P Gene

  • GC13P050466

Summaries for CTAGE10P Gene

GeneCards Summary for CTAGE10P Gene

CTAGE10P (CTAGE Family Member 10, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTAGE10P Gene

Genomics for CTAGE10P Gene

Genomic Location for CTAGE10P Gene

Chromosome:
13
Start:
49,890,409 bp from pter
End:
49,893,380 bp from pter
Size:
2,972 bases
Orientation:
Plus strand

Genomic View for CTAGE10P Gene

Genes around CTAGE10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTAGE10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTAGE10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTAGE10P Gene

No data available for Regulatory Elements for CTAGE10P Gene

Proteins for CTAGE10P Gene

Post-translational modifications for CTAGE10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTAGE10P Gene

Domains & Families for CTAGE10P Gene

Gene Families for CTAGE10P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CTAGE10P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CTAGE10P Gene

Function for CTAGE10P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTAGE10P Gene

Localization for CTAGE10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CTAGE10P Gene

Pathways & Interactions for CTAGE10P Gene

SuperPathways for CTAGE10P Gene

No Data Available

Interacting Proteins for CTAGE10P Gene

Gene Ontology (GO) - Biological Process for CTAGE10P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CTAGE10P Gene

Drugs & Compounds for CTAGE10P Gene

No Compound Related Data Available

Transcripts for CTAGE10P Gene

mRNA/cDNA for CTAGE10P Gene

(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CTAGE10P Gene

CTAGE family, member 10, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CTAGE10P Gene

No ASD Table

Relevant External Links for CTAGE10P Gene

GeneLoc Exon Structure for
CTAGE10P
ECgene alternative splicing isoforms for
CTAGE10P

Expression for CTAGE10P Gene

mRNA expression in normal human tissues for CTAGE10P Gene

mRNA differential expression in normal tissues according to GTEx for CTAGE10P Gene

This gene is overexpressed in Testis (x47.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MaxQB for CTAGE10P Gene



SOURCE GeneReport for Unigene cluster for CTAGE10P Gene Hs.448219

genes like me logo Genes that share expression patterns with CTAGE10P: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CTAGE10P Gene

Orthologs for CTAGE10P Gene

Evolution for CTAGE10P Gene

ENSEMBL:
Gene Tree for CTAGE10P (if available)
TreeFam:
Gene Tree for CTAGE10P (if available)

No data available for Orthologs for CTAGE10P Gene

Paralogs for CTAGE10P Gene

No data available for Paralogs for CTAGE10P Gene

Variants for CTAGE10P Gene

Sequence variations from dbSNP and Humsavar for CTAGE10P Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs2407878 -- 49,890,044(+) ggata(C/T)aaaga upstream-variant-2KB
rs7316930 -- 49,892,988(+) AACCA(C/T)GGCAA nc-transcript-variant
rs7337071 -- 49,890,808(+) TGTGG(A/G/T)AAGAG nc-transcript-variant
rs7331776 -- 49,891,685(+) TTGCA(A/G/T)TCAGA nc-transcript-variant
rs7338963 -- 49,893,202(+) TAGAT(A/G)GTATA nc-transcript-variant

Relevant External Links for CTAGE10P Gene

HapMap Linkage Disequilibrium report
CTAGE10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTAGE10P Gene

Disorders for CTAGE10P Gene

Relevant External Links for CTAGE10P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CTAGE10P

No disorders were found for CTAGE10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTAGE10P Gene

Publications for CTAGE10P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67
  2. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3

Products for CTAGE10P Gene

Sources for CTAGE10P Gene

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