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Aliases for CT62 Gene

Aliases for CT62 Gene

  • Cancer/Testis Antigen 62 2 3

External Ids for CT62 Gene

Summaries for CT62 Gene

GeneCards Summary for CT62 Gene

CT62 (Cancer/Testis Antigen 62) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CT62 Gene

Genomics for CT62 Gene

Genomic Location for CT62 Gene

Start:
71,110,244 bp from pter
End:
71,115,590 bp from pter
Size:
5,347 bases
Orientation:
Minus strand

Genomic View for CT62 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CT62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CT62 Gene

No data available for Regulatory Elements for CT62 Gene

Proteins for CT62 Gene

  • Protein details for CT62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C5K7-CT62_HUMAN
    Recommended name:
    Cancer/testis antigen 62
    Protein Accession:
    P0C5K7
    Secondary Accessions:

    Protein attributes for CT62 Gene

    Size:
    136 amino acids
    Molecular mass:
    15412 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CT62 Gene

Proteomics data for CT62 Gene at MOPED

Post-translational modifications for CT62 Gene

No Post-translational modifications

Other Protein References for CT62 Gene

No data available for DME Specific Peptides for CT62 Gene

Domains for CT62 Gene

Protein Domains for CT62 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for CT62 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CT62: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CT62 Gene

Function for CT62 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CT62 Gene

Localization for CT62 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CT62 Gene COMPARTMENTS Subcellular localization image for CT62 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CT62 Gene

Pathways for CT62 Gene

SuperPathways for CT62 Gene

No Data Available

Interacting Proteins for CT62 Gene

Gene Ontology (GO) - Biological Process for CT62 Gene

None

No data available for Pathways by source for CT62 Gene

Transcripts for CT62 Gene

mRNA/cDNA for CT62 Gene

(2) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CT62 Gene

Cancer/testis antigen 62:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CT62 Gene

No ASD Table

Relevant External Links for CT62 Gene

GeneLoc Exon Structure for
CT62
ECgene alternative splicing isoforms for
CT62

Expression for CT62 Gene

mRNA expression in normal human tissues for CT62 Gene

mRNA differential expression in normal tissues according to GTEx for CT62 Gene

This gene is overexpressed in Testis (44.2).

SOURCE GeneReport for Unigene cluster for CT62 Gene Hs.646533

mRNA Expression by UniProt/SwissProt for CT62 Gene

P0C5K7-CT62_HUMAN
Tissue specificity: Testis specific. Expressed in cancer cell lines.
genes like me logo Genes that share expressions with CT62: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Protein expression for CT62 Gene

Orthologs for CT62 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for CT62 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CT62 35
  • 99.02 (n)
  • 98.53 (a)
CT62 36
  • 99 (a)
OneToOne
Species with no ortholog for CT62:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CT62 Gene

ENSEMBL:
Gene Tree for CT62 (if available)
TreeFam:
Gene Tree for CT62 (if available)

Paralogs for CT62 Gene

No data available for Paralogs for CT62 Gene

Variants for CT62 Gene

Sequence variations from dbSNP and Humsavar for CT62 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1052302 -- 71,110,510(-) ATTGA(A/G)AAAGG utr-variant-3-prime
rs1343698 -- 71,110,684(-) TCAGA(A/G)TCCAC utr-variant-3-prime
rs6494895 -- 71,111,067(+) AGTAT(C/T)ATCAT utr-variant-3-prime
rs12438393 -- 71,113,035(+) gaaaa(A/G)aaaat intron-variant
rs16953728 -- 71,110,929(+) ATTGT(C/G)TAGGC utr-variant-3-prime

Relevant External Links for CT62 Gene

HapMap Linkage Disequilibrium report
CT62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CT62 Gene

Disorders for CT62 Gene

No disorders were found for CT62 Gene.

No data available for UniProtKB/Swiss-Prot for CT62 Gene

Publications for CT62 Gene

  1. Identification of cancer/testis-antigen genes by massively parallel signature sequencing. (PMID: 15905330) Chen Y.-T. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2005) 2 3 4
  2. Genome-wide association analyses suggest NELL1 influences adverse metabolic response to HCTZ in African Americans. (PMID: 23400010) Del-Aguila J.L. … Boerwinkle E. (Pharmacogenomics J. 2013) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CT62 Gene

Sources for CT62 Gene

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