Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CT45B1P Gene

Aliases for CT45B1P Gene

  • Cancer/Testis Antigen Family 45 Member B1, Pseudogene 2 3
  • CTC-287O8.1 5

External Ids for CT45B1P Gene

Previous GeneCards Identifiers for CT45B1P Gene

  • GC00U923222
  • GC05U901203
  • GC05M109176

Summaries for CT45B1P Gene

GeneCards Summary for CT45B1P Gene

CT45B1P (Cancer/Testis Antigen Family 45 Member B1, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CT45B1P Gene

Genomics for CT45B1P Gene

Regulatory Elements for CT45B1P Gene

Enhancers for CT45B1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G109844 0.6 ENCODE 0.7 -4.2 -4159 1.0 CTCF SMC3 HNF4A HOMEZ RAD21 ATF2 SP7 LINC01848 MAN2A1 RN7SKP230 LOC285638 CT45B1P GC05P109871
GH05G109837 0.6 ENCODE 0.7 +2.5 2516 0.8 JUND CEBPA TEAD4 CEBPB MAFG CEBPG CHD7 CT45B1P GC05M109796
GH05G109863 1.2 Ensembl ENCODE dbSUPER 0.3 -24.7 -24679 3.8 SOX13 JUN ZSCAN4 SIN3A RAD21 FOSL1 ZNF316 GATA2 SCRT2 FOSL2 LOC285638 RN7SKP230 ENSG00000271849 GC05P109871 CT45B1P
GH05G109856 0.8 ENCODE dbSUPER 0.4 -17.0 -16965 2.9 SOX13 MAFF ZNF316 MAFG EMSY MAFK LINC01848 RN7SKP230 LOC285638 ENSG00000271849 GC05P109871 CT45B1P
GH05G109849 0.4 ENCODE 0.4 -8.9 -8877 0.9 ZBTB40 LINC01848 MAN2A1 LOC285638 ENSG00000271849 CT45B1P GC05P109871
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CT45B1P on UCSC Golden Path with GeneCards custom track

Genomic Location for CT45B1P Gene

Chromosome:
5
Start:
109,839,949 bp from pter
End:
109,840,697 bp from pter
Size:
749 bases
Orientation:
Minus strand

Genomic View for CT45B1P Gene

Genes around CT45B1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CT45B1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CT45B1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CT45B1P Gene

Proteins for CT45B1P Gene

Post-translational modifications for CT45B1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CT45B1P Gene

Domains & Families for CT45B1P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CT45B1P Gene

Function for CT45B1P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CT45B1P Gene

Localization for CT45B1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CT45B1P Gene

Pathways & Interactions for CT45B1P Gene

SuperPathways for CT45B1P Gene

No Data Available

Interacting Proteins for CT45B1P Gene

Gene Ontology (GO) - Biological Process for CT45B1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CT45B1P Gene

Drugs & Compounds for CT45B1P Gene

No Compound Related Data Available

Transcripts for CT45B1P Gene

mRNA/cDNA for CT45B1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CT45B1P Gene

No ASD Table

Relevant External Links for CT45B1P Gene

GeneLoc Exon Structure for
CT45B1P
ECgene alternative splicing isoforms for
CT45B1P

Expression for CT45B1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CT45B1P Gene

NURSA nuclear receptor signaling pathways regulating expression of CT45B1P Gene:

CT45B1P
genes like me logo Genes that share expression patterns with CT45B1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CT45B1P Gene

Orthologs for CT45B1P Gene

Evolution for CT45B1P Gene

ENSEMBL:
Gene Tree for CT45B1P (if available)
TreeFam:
Gene Tree for CT45B1P (if available)

No data available for Orthologs for CT45B1P Gene

Paralogs for CT45B1P Gene

No data available for Paralogs for CT45B1P Gene

Variants for CT45B1P Gene

Relevant External Links for CT45B1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CT45B1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CT45B1P Gene

Disorders for CT45B1P Gene

Relevant External Links for CT45B1P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CT45B1P

No disorders were found for CT45B1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CT45B1P Gene

Publications for CT45B1P Gene

  1. Identification of cancer/testis-antigen genes by massively parallel signature sequencing. (PMID: 15905330) Chen Y.-T. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2005) 2 3 64

Products for CT45B1P Gene

Sources for CT45B1P Gene

Content
Loading form....