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Aliases for CST13P Gene

Aliases for CST13P Gene

  • Cystatin 13, Pseudogene 2 3
  • Cystatin T 2 3
  • Cystatin Pseudogene 3
  • CTES6 3
  • CSTT 3

External Ids for CST13P Gene

Summaries for CST13P Gene

GeneCards Summary for CST13P Gene

CST13P (Cystatin 13, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CST13P Gene

Genomics for CST13P Gene

Genomic Location for CST13P Gene

23,519,146 bp from pter
23,542,018 bp from pter
22,873 bases
Plus strand

Genomic View for CST13P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CST13P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CST13P Gene

No data available for Regulatory Elements for CST13P Gene

Proteins for CST13P Gene

Post-translational modifications for CST13P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CST13P Gene

Domains for CST13P Gene

Gene Families for CST13P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CST13P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CST13P Gene

Function for CST13P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CST13P Gene

Localization for CST13P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CST13P Gene

Pathways for CST13P Gene

SuperPathways for CST13P Gene

No Data Available

Interacting Proteins for CST13P Gene

Gene Ontology (GO) - Biological Process for CST13P Gene


No data available for Pathways by source for CST13P Gene

Transcripts for CST13P Gene

mRNA/cDNA for CST13P Gene

(7) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CST13P Gene

Cystatin 13, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CST13P Gene

No ASD Table

Relevant External Links for CST13P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CST13P Gene

mRNA expression in normal human tissues for CST13P Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CST13P Gene

This gene is overexpressed in Testis (52.8).

SOURCE GeneReport for Unigene cluster for CST13P Gene Hs.400007

genes like me logo Genes that share expressions with CST13P: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CST13P Gene

Orthologs for CST13P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for CST13P Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Cst13 16
Species with no ortholog for CST13P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CST13P Gene

Gene Tree for CST13P (if available)
Gene Tree for CST13P (if available)

Paralogs for CST13P Gene

No data available for Paralogs for CST13P Gene

Variants for CST13P Gene

Sequence variations from dbSNP and Humsavar for CST13P Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs238641 -- 23,530,020(-) GCAGG(C/T)AAAAC intron-variant
rs238642 -- 23,529,875(+) ATGAA(C/T)GCTCA intron-variant
rs238643 -- 23,526,892(-) AGGAT(A/G)GTTAG intron-variant
rs238644 -- 23,526,417(-) AAGAA(C/T)GAGAC intron-variant
rs238645 -- 23,524,419(+) CTTAT(G/T)CGTCT intron-variant

Relevant External Links for CST13P Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CST13P Gene

Disorders for CST13P Gene

No disorders were found for CST13P Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CST13P Gene

Publications for CST13P Gene

  1. Evolution and human tissue expression of the Cres/Testatin subgroup genes, a reproductive tissue specific subgroup of the type 2 cystatins. (PMID: 20565543) Frygelius J. … TAPhAPnen V. (Evol. Dev. 2010) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CST13P Gene

Sources for CST13P Gene

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