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Aliases for CSPG4P13 Gene

Aliases for CSPG4P13 Gene

  • Chondroitin Sulfate Proteoglycan 4 Pseudogene 13 2 3 5

External Ids for CSPG4P13 Gene

Previous GeneCards Identifiers for CSPG4P13 Gene

  • GC15P078171

Summaries for CSPG4P13 Gene

GeneCards Summary for CSPG4P13 Gene

CSPG4P13 (Chondroitin Sulfate Proteoglycan 4 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CSPG4P13 Gene

Genomics for CSPG4P13 Gene

Regulatory Elements for CSPG4P13 Gene

Enhancers for CSPG4P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G078373 1.2 Ensembl ENCODE 4.4 +495.9 495915 3.1 HDAC1 PKNOX1 ATF1 FOXA2 NFIB DMAP1 THRB RAD21 YY1 RARA DNAJA4 LOC645752 CSPG4P13 LOC105370912 GC15P078347
GH15G077159 1 Ensembl ENCODE 5.1 -717.6 -717567 2.4 NFIB ARID4B RAD21 CTBP1 NCOR1 HNF4G NR2F6 MAFK ZNF652 GATAD2A PEAK1 CSPG4P13 ENSG00000261244 HMGN1P27 PIR35714 GC15M077111
GH15G077142 0.9 Ensembl ENCODE 5.1 -734.0 -733992 3.8 ELF3 JUN ZNF10 TBX21 EP300 JUND GATA2 EED IKZF1 FOS HMG20A TSPAN3 PEAK1 LOC101929457 CSPG4P13 GC15M077111 PIR35714 HMGN1P27
GH15G078340 0.7 ENCODE 5 +462.9 462864 1.6 RING1 ZNF263 CTCF RNF2 CHD1 ZMYM3 ZNF507 HIC1 GATA3 HDAC2 WDR61 ENSG00000259562 ENSG00000260988 CRABP1 CSPG4P13 ENSG00000279694
GH15G077874 1.3 Ensembl ENCODE dbSUPER 0.7 -2.8 -2838 2.0 CTCF PKNOX1 RAD21 ARID3A EED PATZ1 SMC3 RELB CREM IKZF2 LOC645752 ENSG00000261244 SCAPER CSPG4P13 GC15P077854
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CSPG4P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for CSPG4P13 Gene

Chromosome:
15
Start:
77,878,638 bp from pter
End:
77,904,674 bp from pter
Size:
26,037 bases
Orientation:
Plus strand

Genomic View for CSPG4P13 Gene

Genes around CSPG4P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CSPG4P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSPG4P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CSPG4P13 Gene

Proteins for CSPG4P13 Gene

Post-translational modifications for CSPG4P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSPG4P13 Gene

Domains & Families for CSPG4P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CSPG4P13 Gene

Function for CSPG4P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSPG4P13 Gene

Localization for CSPG4P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CSPG4P13 Gene

Pathways & Interactions for CSPG4P13 Gene

SuperPathways for CSPG4P13 Gene

No Data Available

Interacting Proteins for CSPG4P13 Gene

Gene Ontology (GO) - Biological Process for CSPG4P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CSPG4P13 Gene

Drugs & Compounds for CSPG4P13 Gene

No Compound Related Data Available

Transcripts for CSPG4P13 Gene

mRNA/cDNA for CSPG4P13 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CSPG4P13 Gene

No ASD Table

Relevant External Links for CSPG4P13 Gene

GeneLoc Exon Structure for
CSPG4P13
ECgene alternative splicing isoforms for
CSPG4P13

Expression for CSPG4P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CSPG4P13 Gene

mRNA differential expression in normal tissues according to GTEx for CSPG4P13 Gene

This gene is overexpressed in Artery - Tibial (x11.3) and Heart - Left Ventricle (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of CSPG4P13 Gene:

CSPG4P13
genes like me logo Genes that share expression patterns with CSPG4P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CSPG4P13 Gene

Orthologs for CSPG4P13 Gene

Evolution for CSPG4P13 Gene

ENSEMBL:
Gene Tree for CSPG4P13 (if available)
TreeFam:
Gene Tree for CSPG4P13 (if available)

No data available for Orthologs for CSPG4P13 Gene

Paralogs for CSPG4P13 Gene

No data available for Paralogs for CSPG4P13 Gene

Variants for CSPG4P13 Gene

Relevant External Links for CSPG4P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CSPG4P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSPG4P13 Gene

Disorders for CSPG4P13 Gene

No disorders were found for CSPG4P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CSPG4P13 Gene

Publications for CSPG4P13 Gene

No publications were found for CSPG4P13 Gene.

Products for CSPG4P13 Gene

Sources for CSPG4P13 Gene

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