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Aliases for CSPG4P12 Gene

Aliases for CSPG4P12 Gene

  • Chondroitin Sulfate Proteoglycan 4 Pseudogene 12 2 3 5

External Ids for CSPG4P12 Gene

Previous GeneCards Identifiers for CSPG4P12 Gene

  • GC15P085735

Summaries for CSPG4P12 Gene

GeneCards Summary for CSPG4P12 Gene

CSPG4P12 (Chondroitin Sulfate Proteoglycan 4 Pseudogene 12) is a Pseudogene.

Additional gene information for CSPG4P12 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CSPG4P12 Gene

Genomics for CSPG4P12 Gene

GeneHancer (GH) Regulatory Elements for CSPG4P12 Gene

Promoters and enhancers for CSPG4P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I084714 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 21.3 -475.5 -475451 3.4 CLOCK ZFP64 FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 ZNF548 SP3 SEC11A SCAND2P WDR73 NMB GOLGA6L5P ZNF592 LINC00933 UBE2Q2P1 GOLGA6L4 CSPG4P12
GH15I085023 Enhancer 0.4 dbSUPER 13.7 -168.0 -168041 0.5 IKZF1 ZNF214 GC15P085023 DNM1P51 ENSG00000259683 UBE2Q2L GOLGA6L3 LOC103171574 CSPG4P12 GOLGA2P7 GC15P085002 PDE8A
GH15I085039 Enhancer 0.2 dbSUPER 4.4 -151.6 -151622 1.2 ALPK3 LOC101929479 CSPG4P12 ENSG00000259407 GC15P085023 PDE8A GC15P085105
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CSPG4P12 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CSPG4P12 Gene

Genomic Locations for CSPG4P12 Gene
chr15:85,191,412-85,213,905
(GRCh38/hg38)
Size:
22,494 bases
Orientation:
Plus strand
chr15:85,734,643-85,757,136
(GRCh37/hg19)

Genomic View for CSPG4P12 Gene

Genes around CSPG4P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CSPG4P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSPG4P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CSPG4P12 Gene

Proteins for CSPG4P12 Gene

Post-translational modifications for CSPG4P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSPG4P12 Gene

Domains & Families for CSPG4P12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CSPG4P12 Gene

Function for CSPG4P12 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSPG4P12 Gene

Localization for CSPG4P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CSPG4P12 Gene

Pathways & Interactions for CSPG4P12 Gene

SuperPathways for CSPG4P12 Gene

No Data Available

Interacting Proteins for CSPG4P12 Gene

Gene Ontology (GO) - Biological Process for CSPG4P12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CSPG4P12 Gene

Drugs & Compounds for CSPG4P12 Gene

No Compound Related Data Available

Transcripts for CSPG4P12 Gene

mRNA/cDNA for CSPG4P12 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CSPG4P12 Gene

No ASD Table

Relevant External Links for CSPG4P12 Gene

GeneLoc Exon Structure for
CSPG4P12
ECgene alternative splicing isoforms for
CSPG4P12

Expression for CSPG4P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CSPG4P12 Gene

NURSA nuclear receptor signaling pathways regulating expression of CSPG4P12 Gene:

CSPG4P12
genes like me logo Genes that share expression patterns with CSPG4P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CSPG4P12 Gene

Orthologs for CSPG4P12 Gene

Evolution for CSPG4P12 Gene

ENSEMBL:
Gene Tree for CSPG4P12 (if available)
TreeFam:
Gene Tree for CSPG4P12 (if available)

No data available for Orthologs for CSPG4P12 Gene

Paralogs for CSPG4P12 Gene

No data available for Paralogs for CSPG4P12 Gene

Variants for CSPG4P12 Gene

Additional Variant Information for CSPG4P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CSPG4P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSPG4P12 Gene

Disorders for CSPG4P12 Gene

No disorders were found for CSPG4P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CSPG4P12 Gene

Publications for CSPG4P12 Gene

No publications were found for CSPG4P12 Gene.

Products for CSPG4P12 Gene

Sources for CSPG4P12 Gene

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